Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:X39:X40
Extra
PDB:
ATOM 1 O3' U A 38 17.328 -50.585 -82.840 1.00 57.45 O
ATOM 2 P A A 39 16.607 -51.785 -82.069 1.00 58.17 P
ATOM 3 OP1 A A 39 16.387 -52.874 -83.059 1.00 61.38 O
ATOM 4 OP2 A A 39 15.432 -51.210 -81.359 1.00 63.99 O
ATOM 5 O5' A A 39 17.712 -52.223 -81.017 1.00 57.35 O
ATOM 6 C5' A A 39 18.913 -52.855 -81.443 1.00 55.93 C
ATOM 7 C4' A A 39 19.445 -53.774 -80.384 1.00 58.72 C
ATOM 8 O4' A A 39 19.984 -52.969 -79.301 1.00 64.70 O
ATOM 9 C3' A A 39 18.397 -54.691 -79.755 1.00 60.83 C
ATOM 10 O3' A A 39 18.995 -55.938 -79.410 1.00 63.01 O
ATOM 11 C2' A A 39 18.009 -53.940 -78.486 1.00 65.43 C
ATOM 12 O2' A A 39 17.496 -54.755 -77.456 1.00 68.42 O
ATOM 13 C1' A A 39 19.335 -53.301 -78.091 1.00 68.43 C
ATOM 14 N9 A A 39 19.188 -52.082 -77.293 1.00 75.14 N
ATOM 15 C8 A A 39 18.215 -51.120 -77.397 1.00 72.85 C
ATOM 16 N7 A A 39 18.339 -50.157 -76.519 1.00 77.55 N
ATOM 17 C5 A A 39 19.465 -50.514 -75.788 1.00 83.20 C
ATOM 18 C6 A A 39 20.128 -49.906 -74.711 1.00 92.74 C
ATOM 19 N6 A A 39 19.733 -48.757 -74.161 1.00 97.77 N
ATOM 20 N1 A A 39 21.222 -50.523 -74.213 1.00 99.77 N
ATOM 21 C2 A A 39 21.615 -51.677 -74.765 1.00 96.13 C
ATOM 22 N3 A A 39 21.078 -52.347 -75.780 1.00 86.61 N
ATOM 23 C4 A A 39 19.994 -51.703 -76.249 1.00 81.78 C
ATOM 24 P G A 40 19.234 -57.063 -80.535 1.00 65.79 P
ATOM 25 OP1 G A 40 20.691 -57.065 -80.842 1.00 66.61 O
ATOM 26 OP2 G A 40 18.269 -56.804 -81.632 1.00 61.67 O
ATOM 27 O5' G A 40 18.836 -58.405 -79.783 1.00 65.72 O
TER
ATOM 1 O3' A B 39 18.995 -55.938 -79.410 1.00 63.01 O
ATOM 2 P G B 40 19.234 -57.063 -80.535 1.00 65.79 P
ATOM 3 OP1 G B 40 20.691 -57.065 -80.842 1.00 66.61 O
ATOM 4 OP2 G B 40 18.269 -56.804 -81.632 1.00 61.67 O
ATOM 5 O5' G B 40 18.836 -58.405 -79.783 1.00 65.72 O
ATOM 6 C5' G B 40 17.626 -58.505 -79.054 1.00 64.58 C
ATOM 7 C4' G B 40 17.791 -59.412 -77.869 1.00 64.91 C
ATOM 8 O4' G B 40 18.214 -60.718 -78.324 1.00 61.30 O
ATOM 9 C3' G B 40 18.853 -58.985 -76.871 1.00 71.04 C
ATOM 10 O3' G B 40 18.350 -58.071 -75.914 1.00 78.22 O
ATOM 11 C2' G B 40 19.322 -60.304 -76.266 1.00 68.29 C
ATOM 12 O2' G B 40 18.444 -60.718 -75.231 1.00 67.96 O
ATOM 13 C1' G B 40 19.165 -61.265 -77.441 1.00 62.29 C
ATOM 14 N9 G B 40 20.425 -61.478 -78.188 1.00 62.88 N
ATOM 15 C8 G B 40 20.588 -61.212 -79.528 1.00 62.32 C
ATOM 16 N7 G B 40 21.772 -61.506 -79.992 1.00 63.23 N
ATOM 17 C5 G B 40 22.442 -62.013 -78.893 1.00 63.67 C
ATOM 18 C6 G B 40 23.769 -62.497 -78.793 1.00 64.14 C
ATOM 19 O6 G B 40 24.634 -62.568 -79.678 1.00 63.58 O
ATOM 20 N1 G B 40 24.056 -62.927 -77.504 1.00 65.76 N
ATOM 21 C2 G B 40 23.182 -62.893 -76.446 1.00 67.29 C
ATOM 22 N2 G B 40 23.660 -63.351 -75.277 1.00 67.40 N
ATOM 23 N3 G B 40 21.937 -62.438 -76.527 1.00 65.83 N
ATOM 24 C4 G B 40 21.629 -62.017 -77.773 1.00 64.85 C
ATOM 25 P U B 41 19.165 -56.737 -75.549 1.00 67.28 P
ATOM 26 OP1 U B 41 18.209 -55.807 -74.906 1.00 67.86 O
ATOM 27 OP2 U B 41 19.871 -56.298 -76.780 1.00 61.92 O
ATOM 28 O5' U B 41 20.221 -57.252 -74.475 1.00 71.94 O
TER
ATOM 2 P A A 39 16.607 -51.785 -82.069 1.00 58.17 P
ATOM 3 OP1 A A 39 16.387 -52.874 -83.059 1.00 61.38 O
ATOM 4 OP2 A A 39 15.432 -51.210 -81.359 1.00 63.99 O
ATOM 5 O5' A A 39 17.712 -52.223 -81.017 1.00 57.35 O
ATOM 6 C5' A A 39 18.913 -52.855 -81.443 1.00 55.93 C
ATOM 7 C4' A A 39 19.445 -53.774 -80.384 1.00 58.72 C
ATOM 8 O4' A A 39 19.984 -52.969 -79.301 1.00 64.70 O
ATOM 9 C3' A A 39 18.397 -54.691 -79.755 1.00 60.83 C
ATOM 10 O3' A A 39 18.995 -55.938 -79.410 1.00 63.01 O
ATOM 11 C2' A A 39 18.009 -53.940 -78.486 1.00 65.43 C
ATOM 12 O2' A A 39 17.496 -54.755 -77.456 1.00 68.42 O
ATOM 13 C1' A A 39 19.335 -53.301 -78.091 1.00 68.43 C
ATOM 14 N9 A A 39 19.188 -52.082 -77.293 1.00 75.14 N
ATOM 15 C8 A A 39 18.215 -51.120 -77.397 1.00 72.85 C
ATOM 16 N7 A A 39 18.339 -50.157 -76.519 1.00 77.55 N
ATOM 17 C5 A A 39 19.465 -50.514 -75.788 1.00 83.20 C
ATOM 18 C6 A A 39 20.128 -49.906 -74.711 1.00 92.74 C
ATOM 19 N6 A A 39 19.733 -48.757 -74.161 1.00 97.77 N
ATOM 20 N1 A A 39 21.222 -50.523 -74.213 1.00 99.77 N
ATOM 21 C2 A A 39 21.615 -51.677 -74.765 1.00 96.13 C
ATOM 22 N3 A A 39 21.078 -52.347 -75.780 1.00 86.61 N
ATOM 23 C4 A A 39 19.994 -51.703 -76.249 1.00 81.78 C
ATOM 24 P G A 40 19.234 -57.063 -80.535 1.00 65.79 P
ATOM 25 OP1 G A 40 20.691 -57.065 -80.842 1.00 66.61 O
ATOM 26 OP2 G A 40 18.269 -56.804 -81.632 1.00 61.67 O
ATOM 27 O5' G A 40 18.836 -58.405 -79.783 1.00 65.72 O
TER
ATOM 1 O3' A B 39 18.995 -55.938 -79.410 1.00 63.01 O
ATOM 2 P G B 40 19.234 -57.063 -80.535 1.00 65.79 P
ATOM 3 OP1 G B 40 20.691 -57.065 -80.842 1.00 66.61 O
ATOM 4 OP2 G B 40 18.269 -56.804 -81.632 1.00 61.67 O
ATOM 5 O5' G B 40 18.836 -58.405 -79.783 1.00 65.72 O
ATOM 6 C5' G B 40 17.626 -58.505 -79.054 1.00 64.58 C
ATOM 7 C4' G B 40 17.791 -59.412 -77.869 1.00 64.91 C
ATOM 8 O4' G B 40 18.214 -60.718 -78.324 1.00 61.30 O
ATOM 9 C3' G B 40 18.853 -58.985 -76.871 1.00 71.04 C
ATOM 10 O3' G B 40 18.350 -58.071 -75.914 1.00 78.22 O
ATOM 11 C2' G B 40 19.322 -60.304 -76.266 1.00 68.29 C
ATOM 12 O2' G B 40 18.444 -60.718 -75.231 1.00 67.96 O
ATOM 13 C1' G B 40 19.165 -61.265 -77.441 1.00 62.29 C
ATOM 14 N9 G B 40 20.425 -61.478 -78.188 1.00 62.88 N
ATOM 15 C8 G B 40 20.588 -61.212 -79.528 1.00 62.32 C
ATOM 16 N7 G B 40 21.772 -61.506 -79.992 1.00 63.23 N
ATOM 17 C5 G B 40 22.442 -62.013 -78.893 1.00 63.67 C
ATOM 18 C6 G B 40 23.769 -62.497 -78.793 1.00 64.14 C
ATOM 19 O6 G B 40 24.634 -62.568 -79.678 1.00 63.58 O
ATOM 20 N1 G B 40 24.056 -62.927 -77.504 1.00 65.76 N
ATOM 21 C2 G B 40 23.182 -62.893 -76.446 1.00 67.29 C
ATOM 22 N2 G B 40 23.660 -63.351 -75.277 1.00 67.40 N
ATOM 23 N3 G B 40 21.937 -62.438 -76.527 1.00 65.83 N
ATOM 24 C4 G B 40 21.629 -62.017 -77.773 1.00 64.85 C
ATOM 25 P U B 41 19.165 -56.737 -75.549 1.00 67.28 P
ATOM 26 OP1 U B 41 18.209 -55.807 -74.906 1.00 67.86 O
ATOM 27 OP2 U B 41 19.871 -56.298 -76.780 1.00 61.92 O
ATOM 28 O5' U B 41 20.221 -57.252 -74.475 1.00 71.94 O
TER
Atoms:
OP1: (16.387,-52.874,-83.059)
OP2: (15.432,-51.210,-81.359)
C3': (18.397,-54.691,-79.755)
C1': (19.335,-53.301,-78.091)
C5': (18.913,-52.855,-81.443)
O4': (19.984,-52.969,-79.301)
C8: (18.215,-51.120,-77.397)
O2': (17.496,-54.755,-77.456)
C6: (20.128,-49.906,-74.711)
C5: (19.465,-50.514,-75.788)
C4: (19.994,-51.703,-76.249)
P: (16.607,-51.785,-82.069)
C4': (19.445,-53.774,-80.384)
C2': (18.009,-53.940,-78.486)
C2: (21.615,-51.677,-74.765)
N1: (21.222,-50.523,-74.213)
N3: (21.078,-52.347,-75.780)
N6: (19.733,-48.757,-74.161)
N7: (18.339,-50.157,-76.519)
N9: (19.188,-52.082,-77.293)
O5': (17.712,-52.223,-81.017)
O3': (18.995,-55.938,-79.410)
OP2: (15.432,-51.210,-81.359)
C3': (18.397,-54.691,-79.755)
C1': (19.335,-53.301,-78.091)
C5': (18.913,-52.855,-81.443)
O4': (19.984,-52.969,-79.301)
C8: (18.215,-51.120,-77.397)
O2': (17.496,-54.755,-77.456)
C6: (20.128,-49.906,-74.711)
C5: (19.465,-50.514,-75.788)
C4: (19.994,-51.703,-76.249)
P: (16.607,-51.785,-82.069)
C4': (19.445,-53.774,-80.384)
C2': (18.009,-53.940,-78.486)
C2: (21.615,-51.677,-74.765)
N1: (21.222,-50.523,-74.213)
N3: (21.078,-52.347,-75.780)
N6: (19.733,-48.757,-74.161)
N7: (18.339,-50.157,-76.519)
N9: (19.188,-52.082,-77.293)
O5': (17.712,-52.223,-81.017)
O3': (18.995,-55.938,-79.410)
OP1: (20.691,-57.065,-80.842)
OP2: (18.269,-56.804,-81.632)
C3': (18.853,-58.985,-76.871)
C1': (19.165,-61.265,-77.441)
C5': (17.626,-58.505,-79.054)
O6: (24.634,-62.568,-79.678)
O4': (18.214,-60.718,-78.324)
C8: (20.588,-61.212,-79.528)
C2: (23.182,-62.893,-76.446)
C6: (23.769,-62.497,-78.793)
C5: (22.442,-62.013,-78.893)
C4: (21.629,-62.017,-77.773)
P: (19.234,-57.063,-80.535)
C4': (17.791,-59.412,-77.869)
C2': (19.322,-60.304,-76.266)
O2': (18.444,-60.718,-75.231)
N1: (24.056,-62.927,-77.504)
N2: (23.660,-63.351,-75.277)
N3: (21.937,-62.438,-76.527)
N7: (21.772,-61.506,-79.992)
N9: (20.425,-61.478,-78.188)
O5': (18.836,-58.405,-79.783)
O3': (18.350,-58.071,-75.914)
OP2: (18.269,-56.804,-81.632)
C3': (18.853,-58.985,-76.871)
C1': (19.165,-61.265,-77.441)
C5': (17.626,-58.505,-79.054)
O6: (24.634,-62.568,-79.678)
O4': (18.214,-60.718,-78.324)
C8: (20.588,-61.212,-79.528)
C2: (23.182,-62.893,-76.446)
C6: (23.769,-62.497,-78.793)
C5: (22.442,-62.013,-78.893)
C4: (21.629,-62.017,-77.773)
P: (19.234,-57.063,-80.535)
C4': (17.791,-59.412,-77.869)
C2': (19.322,-60.304,-76.266)
O2': (18.444,-60.718,-75.231)
N1: (24.056,-62.927,-77.504)
N2: (23.660,-63.351,-75.277)
N3: (21.937,-62.438,-76.527)
N7: (21.772,-61.506,-79.992)
N9: (20.425,-61.478,-78.188)
O5': (18.836,-58.405,-79.783)
O3': (18.350,-58.071,-75.914)
Image (generated by PyMOL):