ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1361:A1362

Extra

PDB:
ATOM 1 O3' U A1360 -10.971 -54.901 29.998 1.00 33.96 O
ATOM 2 P A A1361 -11.520 -53.991 31.198 1.00 44.78 P
ATOM 3 OP1 A A1361 -10.778 -54.377 32.417 1.00 42.17 O
ATOM 4 OP2 A A1361 -13.017 -53.976 31.203 1.00 58.81 O
ATOM 5 O5' A A1361 -10.992 -52.540 30.770 1.00 42.01 O
ATOM 6 C5' A A1361 -9.623 -52.191 30.898 1.00 52.96 C
ATOM 7 C4' A A1361 -9.348 -50.841 30.262 1.00 49.27 C
ATOM 8 O4' A A1361 -9.880 -50.820 28.908 1.00 49.31 O
ATOM 9 C3' A A1361 -9.987 -49.680 31.011 1.00 46.25 C
ATOM 10 O3' A A1361 -9.174 -48.526 30.990 1.00 50.30 O
ATOM 11 C2' A A1361 -11.229 -49.411 30.186 1.00 48.25 C
ATOM 12 O2' A A1361 -11.582 -48.054 30.263 1.00 53.34 O
ATOM 13 C1' A A1361 -10.751 -49.715 28.774 1.00 52.19 C
ATOM 14 N9 A A1361 -11.857 -50.030 27.864 1.00 54.11 N
ATOM 15 C8 A A1361 -12.678 -51.126 27.888 1.00 55.82 C
ATOM 16 N7 A A1361 -13.597 -51.149 26.953 1.00 49.84 N
ATOM 17 C5 A A1361 -13.363 -49.978 26.273 1.00 50.23 C
ATOM 18 C6 A A1361 -14.001 -49.418 25.165 1.00 49.02 C
ATOM 19 N6 A A1361 -15.031 -50.011 24.559 1.00 44.09 N
ATOM 20 N1 A A1361 -13.530 -48.237 24.710 1.00 58.25 N
ATOM 21 C2 A A1361 -12.492 -47.662 25.332 1.00 57.16 C
ATOM 22 N3 A A1361 -11.814 -48.099 26.391 1.00 56.55 N
ATOM 23 C4 A A1361 -12.305 -49.273 26.813 1.00 53.83 C
ATOM 24 P G A1362 -7.743 -48.461 31.699 1.00 45.02 P
ATOM 25 OP1 G A1362 -6.768 -48.318 30.595 1.00 57.18 O
ATOM 26 OP2 G A1362 -7.619 -49.580 32.673 1.00 44.53 O
ATOM 27 O5' G A1362 -7.794 -47.084 32.526 1.00 41.44 O
TER

ATOM 1 O3' A B1361 -9.174 -48.526 30.990 1.00 50.30 O
ATOM 2 P G B1362 -7.743 -48.461 31.699 1.00 45.02 P
ATOM 3 OP1 G B1362 -6.768 -48.318 30.595 1.00 57.18 O
ATOM 4 OP2 G B1362 -7.619 -49.580 32.673 1.00 44.53 O
ATOM 5 O5' G B1362 -7.794 -47.084 32.526 1.00 41.44 O
ATOM 6 C5' G B1362 -8.724 -46.912 33.590 1.00 44.46 C
ATOM 7 C4' G B1362 -9.312 -45.508 33.600 1.00 46.37 C
ATOM 8 O4' G B1362 -8.435 -44.639 34.372 1.00 50.11 O
ATOM 9 C3' G B1362 -9.521 -44.847 32.236 1.00 39.02 C
ATOM 10 O3' G B1362 -10.880 -44.907 31.820 1.00 26.22 O
ATOM 11 C2' G B1362 -9.192 -43.402 32.553 1.00 48.47 C
ATOM 12 O2' G B1362 -10.342 -42.787 33.103 1.00 48.54 O
ATOM 13 C1' G B1362 -8.065 -43.529 33.582 1.00 49.06 C
ATOM 14 N9 G B1362 -6.723 -43.777 33.040 1.00 57.95 N
ATOM 15 C8 G B1362 -5.932 -44.855 33.333 1.00 58.38 C
ATOM 16 N7 G B1362 -4.786 -44.852 32.718 1.00 59.70 N
ATOM 17 C5 G B1362 -4.806 -43.693 31.962 1.00 59.59 C
ATOM 18 C6 G B1362 -3.825 -43.173 31.089 1.00 62.50 C
ATOM 19 O6 G B1362 -2.715 -43.645 30.810 1.00 63.36 O
ATOM 20 N1 G B1362 -4.236 -41.980 30.513 1.00 66.59 N
ATOM 21 C2 G B1362 -5.439 -41.372 30.749 1.00 62.92 C
ATOM 22 N2 G B1362 -5.658 -40.225 30.099 1.00 60.23 N
ATOM 23 N3 G B1362 -6.364 -41.850 31.563 1.00 64.79 N
ATOM 24 C4 G B1362 -5.988 -43.016 32.144 1.00 64.28 C
ATOM 25 P G B1363 -11.281 -44.878 30.263 1.00 60.23 P
ATOM 26 OP1 G B1363 -12.761 -44.806 30.189 1.00 69.26 O
ATOM 27 OP2 G B1363 -10.555 -45.948 29.543 1.00 67.34 O
ATOM 28 O5' G B1363 -10.678 -43.517 29.699 1.00 66.96 O
TER

Atoms:
OP1: (-10.778,-54.377,32.417)
OP2: (-13.017,-53.976,31.203)
C3': (-9.987,-49.680,31.011)
C1': (-10.751,-49.715,28.774)
C5': (-9.623,-52.191,30.898)
O4': (-9.880,-50.820,28.908)
C8: (-12.678,-51.126,27.888)
O2': (-11.582,-48.054,30.263)
C6: (-14.001,-49.418,25.165)
C5: (-13.363,-49.978,26.273)
C4: (-12.305,-49.273,26.813)
P: (-11.520,-53.991,31.198)
C4': (-9.348,-50.841,30.262)
C2': (-11.229,-49.411,30.186)
C2: (-12.492,-47.662,25.332)
N1: (-13.530,-48.237,24.710)
N3: (-11.814,-48.099,26.391)
N6: (-15.031,-50.011,24.559)
N7: (-13.597,-51.149,26.953)
N9: (-11.857,-50.030,27.864)
O5': (-10.992,-52.540,30.770)
O3': (-9.174,-48.526,30.990)
OP1: (-6.768,-48.318,30.595)
OP2: (-7.619,-49.580,32.673)
C3': (-9.521,-44.847,32.236)
C1': (-8.065,-43.529,33.582)
C5': (-8.724,-46.912,33.590)
O6: (-2.715,-43.645,30.810)
O4': (-8.435,-44.639,34.372)
C8: (-5.932,-44.855,33.333)
C2: (-5.439,-41.372,30.749)
C6: (-3.825,-43.173,31.089)
C5: (-4.806,-43.693,31.962)
C4: (-5.988,-43.016,32.144)
P: (-7.743,-48.461,31.699)
C4': (-9.312,-45.508,33.600)
C2': (-9.192,-43.402,32.553)
O2': (-10.342,-42.787,33.103)
N1: (-4.236,-41.980,30.513)
N2: (-5.658,-40.225,30.099)
N3: (-6.364,-41.850,31.563)
N7: (-4.786,-44.852,32.718)
N9: (-6.723,-43.777,33.040)
O5': (-7.794,-47.084,32.526)
O3': (-10.880,-44.907,31.820)
Image (generated by PyMOL):
PyMOL image
show in jmol