ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F2Q:X39:X40

Extra

PDB:
ATOM 1 O3' U A 38 14.283 51.706 9.969 1.00 62.53 O
ATOM 2 P A A 39 15.061 50.616 10.837 1.00 61.47 P
ATOM 3 OP1 A A 39 15.870 49.848 9.873 1.00 62.16 O
ATOM 4 OP2 A A 39 14.128 49.916 11.756 1.00 60.80 O
ATOM 5 O5' A A 39 16.020 51.512 11.733 1.00 61.89 O
ATOM 6 C5' A A 39 17.242 51.974 11.214 1.00 63.28 C
ATOM 7 C4' A A 39 18.241 52.063 12.346 1.00 64.03 C
ATOM 8 O4' A A 39 17.754 53.022 13.324 1.00 64.59 O
ATOM 9 C3' A A 39 18.426 50.743 13.083 1.00 64.64 C
ATOM 10 O3' A A 39 19.799 50.492 13.367 1.00 65.19 O
ATOM 11 C2' A A 39 17.652 50.944 14.376 1.00 64.92 C
ATOM 12 O2' A A 39 18.262 50.258 15.447 1.00 67.83 O
ATOM 13 C1' A A 39 17.770 52.440 14.605 1.00 64.10 C
ATOM 14 N9 A A 39 16.681 52.963 15.424 1.00 63.71 N
ATOM 15 C8 A A 39 15.359 52.628 15.348 1.00 63.93 C
ATOM 16 N7 A A 39 14.606 53.236 16.232 1.00 63.29 N
ATOM 17 C5 A A 39 15.494 54.025 16.937 1.00 62.80 C
ATOM 18 C6 A A 39 15.325 54.918 18.013 1.00 63.06 C
ATOM 19 N6 A A 39 14.144 55.171 18.582 1.00 63.06 N
ATOM 20 N1 A A 39 16.421 55.547 18.489 1.00 63.23 N
ATOM 21 C2 A A 39 17.603 55.300 17.917 1.00 62.61 C
ATOM 22 N3 A A 39 17.881 54.479 16.905 1.00 63.63 N
ATOM 23 C4 A A 39 16.776 53.863 16.459 1.00 63.20 C
ATOM 24 P G A 40 20.859 50.217 12.206 1.00 64.54 P
ATOM 25 OP1 G A 40 21.562 51.497 11.958 1.00 65.34 O
ATOM 26 OP2 G A 40 20.190 49.506 11.104 1.00 65.90 O
ATOM 27 O5' G A 40 21.848 49.161 12.873 1.00 65.04 O
TER

ATOM 1 O3' A B 39 19.799 50.492 13.367 1.00 65.19 O
ATOM 2 P G B 40 20.859 50.217 12.206 1.00 64.54 P
ATOM 3 OP1 G B 40 21.562 51.497 11.958 1.00 65.34 O
ATOM 4 OP2 G B 40 20.190 49.506 11.104 1.00 65.90 O
ATOM 5 O5' G B 40 21.848 49.161 12.873 1.00 65.04 O
ATOM 6 C5' G B 40 21.338 48.080 13.656 1.00 63.53 C
ATOM 7 C4' G B 40 22.216 47.871 14.876 1.00 63.29 C
ATOM 8 O4' G B 40 23.567 47.562 14.444 1.00 63.82 O
ATOM 9 C3' G B 40 22.377 49.109 15.739 1.00 63.95 C
ATOM 10 O3' G B 40 21.320 49.192 16.690 1.00 64.96 O
ATOM 11 C2' G B 40 23.708 48.833 16.411 1.00 63.16 C
ATOM 12 O2' G B 40 23.538 47.897 17.447 1.00 64.06 O
ATOM 13 C1' G B 40 24.512 48.200 15.279 1.00 63.21 C
ATOM 14 N9 G B 40 25.314 49.132 14.473 1.00 63.03 N
ATOM 15 C8 G B 40 25.184 49.377 13.123 1.00 63.49 C
ATOM 16 N7 G B 40 26.046 50.250 12.658 1.00 63.02 N
ATOM 17 C5 G B 40 26.799 50.606 13.763 1.00 61.74 C
ATOM 18 C6 G B 40 27.868 51.525 13.870 1.00 62.87 C
ATOM 19 O6 G B 40 28.382 52.225 12.982 1.00 63.95 O
ATOM 20 N1 G B 40 28.351 51.603 15.172 1.00 62.97 N
ATOM 21 C2 G B 40 27.868 50.881 16.233 1.00 62.00 C
ATOM 22 N2 G B 40 28.480 51.091 17.406 1.00 62.43 N
ATOM 23 N3 G B 40 26.861 50.020 16.148 1.00 61.15 N
ATOM 24 C4 G B 40 26.372 49.929 14.888 1.00 61.92 C
ATOM 25 P U B 41 20.842 50.610 17.277 1.00 66.16 P
ATOM 26 OP1 U B 41 19.661 50.359 18.135 1.00 65.53 O
ATOM 27 OP2 U B 41 20.746 51.571 16.153 1.00 65.38 O
ATOM 28 O5' U B 41 22.075 51.065 18.205 1.00 67.62 O
TER

Atoms:
OP1: (15.870,49.848,9.873)
OP2: (14.128,49.916,11.756)
C3': (18.426,50.743,13.083)
C1': (17.770,52.440,14.605)
C5': (17.242,51.974,11.214)
O4': (17.754,53.022,13.324)
C8: (15.359,52.628,15.348)
O2': (18.262,50.258,15.447)
C6: (15.325,54.918,18.013)
C5: (15.494,54.025,16.937)
C4: (16.776,53.863,16.459)
P: (15.061,50.616,10.837)
C4': (18.241,52.063,12.346)
C2': (17.652,50.944,14.376)
C2: (17.603,55.300,17.917)
N1: (16.421,55.547,18.489)
N3: (17.881,54.479,16.905)
N6: (14.144,55.171,18.582)
N7: (14.606,53.236,16.232)
N9: (16.681,52.963,15.424)
O5': (16.020,51.512,11.733)
O3': (19.799,50.492,13.367)
OP1: (21.562,51.497,11.958)
OP2: (20.190,49.506,11.104)
C3': (22.377,49.109,15.739)
C1': (24.512,48.200,15.279)
C5': (21.338,48.080,13.656)
O6: (28.382,52.225,12.982)
O4': (23.567,47.562,14.444)
C8: (25.184,49.377,13.123)
C2: (27.868,50.881,16.233)
C6: (27.868,51.525,13.870)
C5: (26.799,50.606,13.763)
C4: (26.372,49.929,14.888)
P: (20.859,50.217,12.206)
C4': (22.216,47.871,14.876)
C2': (23.708,48.833,16.411)
O2': (23.538,47.897,17.447)
N1: (28.351,51.603,15.172)
N2: (28.480,51.091,17.406)
N3: (26.861,50.020,16.148)
N7: (26.046,50.250,12.658)
N9: (25.314,49.132,14.473)
O5': (21.848,49.161,12.873)
O3': (21.320,49.192,16.690)
Image (generated by PyMOL):
PyMOL image
show in jmol