Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1297:A1298
Extra
PDB:
ATOM 1 O3' U A1296 9.914 -54.152 -32.979 1.00 49.94 O
ATOM 2 P A A1297 10.425 -52.921 -33.866 1.00 48.58 P
ATOM 3 OP1 A A1297 9.813 -53.006 -35.208 1.00 53.91 O
ATOM 4 OP2 A A1297 11.898 -52.891 -33.745 1.00 57.90 O
ATOM 5 O5' A A1297 9.848 -51.624 -33.145 1.00 47.85 O
ATOM 6 C5' A A1297 8.459 -51.481 -32.885 1.00 44.70 C
ATOM 7 C4' A A1297 8.159 -50.052 -32.502 1.00 48.71 C
ATOM 8 O4' A A1297 8.820 -49.744 -31.236 1.00 46.35 O
ATOM 9 C3' A A1297 8.648 -49.016 -33.515 1.00 50.15 C
ATOM 10 O3' A A1297 7.719 -47.923 -33.613 1.00 46.52 O
ATOM 11 C2' A A1297 9.972 -48.551 -32.907 1.00 46.60 C
ATOM 12 O2' A A1297 10.297 -47.229 -33.253 1.00 48.18 O
ATOM 13 C1' A A1297 9.689 -48.645 -31.409 1.00 48.04 C
ATOM 14 N9 A A1297 10.882 -48.844 -30.577 1.00 53.69 N
ATOM 15 C8 A A1297 12.003 -49.612 -30.817 1.00 54.07 C
ATOM 16 N7 A A1297 12.903 -49.553 -29.861 1.00 56.46 N
ATOM 17 C5 A A1297 12.338 -48.698 -28.924 1.00 51.71 C
ATOM 18 C6 A A1297 12.788 -48.218 -27.664 1.00 50.68 C
ATOM 19 N6 A A1297 13.954 -48.540 -27.101 1.00 52.95 N
ATOM 20 N1 A A1297 11.975 -47.377 -26.994 1.00 51.93 N
ATOM 21 C2 A A1297 10.792 -47.047 -27.548 1.00 60.91 C
ATOM 22 N3 A A1297 10.259 -47.429 -28.713 1.00 59.40 N
ATOM 23 C4 A A1297 11.092 -48.258 -29.356 1.00 54.82 C
ATOM 24 P G A1298 6.728 -47.803 -34.888 1.00 48.32 P
ATOM 25 OP1 G A1298 5.340 -47.996 -34.367 1.00 39.17 O
ATOM 26 OP2 G A1298 7.225 -48.687 -35.993 1.00 44.46 O
ATOM 27 O5' G A1298 6.927 -46.293 -35.390 1.00 47.91 O
TER
ATOM 1 O3' A B1297 7.719 -47.923 -33.613 1.00 46.52 O
ATOM 2 P G B1298 6.728 -47.803 -34.888 1.00 48.32 P
ATOM 3 OP1 G B1298 5.340 -47.996 -34.367 1.00 39.17 O
ATOM 4 OP2 G B1298 7.225 -48.687 -35.993 1.00 44.46 O
ATOM 5 O5' G B1298 6.927 -46.293 -35.390 1.00 47.91 O
ATOM 6 C5' G B1298 8.034 -45.952 -36.236 1.00 50.71 C
ATOM 7 C4' G B1298 8.316 -44.459 -36.230 1.00 45.85 C
ATOM 8 O4' G B1298 7.309 -43.751 -36.982 1.00 48.37 O
ATOM 9 C3' G B1298 8.420 -43.781 -34.873 1.00 49.26 C
ATOM 10 O3' G B1298 9.804 -43.827 -34.493 1.00 43.17 O
ATOM 11 C2' G B1298 7.989 -42.351 -35.202 1.00 53.63 C
ATOM 12 O2' G B1298 9.068 -41.649 -35.775 1.00 51.98 O
ATOM 13 C1' G B1298 6.950 -42.561 -36.310 1.00 51.60 C
ATOM 14 N9 G B1298 5.543 -42.704 -35.914 1.00 50.73 N
ATOM 15 C8 G B1298 4.729 -43.747 -36.287 1.00 53.77 C
ATOM 16 N7 G B1298 3.521 -43.658 -35.813 1.00 53.33 N
ATOM 17 C5 G B1298 3.518 -42.485 -35.078 1.00 52.48 C
ATOM 18 C6 G B1298 2.464 -41.871 -34.343 1.00 51.45 C
ATOM 19 O6 G B1298 1.303 -42.250 -34.203 1.00 48.18 O
ATOM 20 N1 G B1298 2.871 -40.689 -33.746 1.00 52.53 N
ATOM 21 C2 G B1298 4.124 -40.143 -33.857 1.00 55.90 C
ATOM 22 N2 G B1298 4.296 -38.971 -33.221 1.00 55.68 N
ATOM 23 N3 G B1298 5.129 -40.703 -34.547 1.00 52.69 N
ATOM 24 C4 G B1298 4.756 -41.870 -35.128 1.00 49.13 C
ATOM 25 P G B1299 10.237 -44.026 -32.953 1.00 40.19 P
ATOM 26 OP1 G B1299 11.727 -44.046 -32.975 1.00 40.12 O
ATOM 27 OP2 G B1299 9.492 -45.185 -32.400 1.00 51.12 O
ATOM 28 O5' G B1299 9.739 -42.714 -32.188 1.00 39.73 O
TER
ATOM 2 P A A1297 10.425 -52.921 -33.866 1.00 48.58 P
ATOM 3 OP1 A A1297 9.813 -53.006 -35.208 1.00 53.91 O
ATOM 4 OP2 A A1297 11.898 -52.891 -33.745 1.00 57.90 O
ATOM 5 O5' A A1297 9.848 -51.624 -33.145 1.00 47.85 O
ATOM 6 C5' A A1297 8.459 -51.481 -32.885 1.00 44.70 C
ATOM 7 C4' A A1297 8.159 -50.052 -32.502 1.00 48.71 C
ATOM 8 O4' A A1297 8.820 -49.744 -31.236 1.00 46.35 O
ATOM 9 C3' A A1297 8.648 -49.016 -33.515 1.00 50.15 C
ATOM 10 O3' A A1297 7.719 -47.923 -33.613 1.00 46.52 O
ATOM 11 C2' A A1297 9.972 -48.551 -32.907 1.00 46.60 C
ATOM 12 O2' A A1297 10.297 -47.229 -33.253 1.00 48.18 O
ATOM 13 C1' A A1297 9.689 -48.645 -31.409 1.00 48.04 C
ATOM 14 N9 A A1297 10.882 -48.844 -30.577 1.00 53.69 N
ATOM 15 C8 A A1297 12.003 -49.612 -30.817 1.00 54.07 C
ATOM 16 N7 A A1297 12.903 -49.553 -29.861 1.00 56.46 N
ATOM 17 C5 A A1297 12.338 -48.698 -28.924 1.00 51.71 C
ATOM 18 C6 A A1297 12.788 -48.218 -27.664 1.00 50.68 C
ATOM 19 N6 A A1297 13.954 -48.540 -27.101 1.00 52.95 N
ATOM 20 N1 A A1297 11.975 -47.377 -26.994 1.00 51.93 N
ATOM 21 C2 A A1297 10.792 -47.047 -27.548 1.00 60.91 C
ATOM 22 N3 A A1297 10.259 -47.429 -28.713 1.00 59.40 N
ATOM 23 C4 A A1297 11.092 -48.258 -29.356 1.00 54.82 C
ATOM 24 P G A1298 6.728 -47.803 -34.888 1.00 48.32 P
ATOM 25 OP1 G A1298 5.340 -47.996 -34.367 1.00 39.17 O
ATOM 26 OP2 G A1298 7.225 -48.687 -35.993 1.00 44.46 O
ATOM 27 O5' G A1298 6.927 -46.293 -35.390 1.00 47.91 O
TER
ATOM 1 O3' A B1297 7.719 -47.923 -33.613 1.00 46.52 O
ATOM 2 P G B1298 6.728 -47.803 -34.888 1.00 48.32 P
ATOM 3 OP1 G B1298 5.340 -47.996 -34.367 1.00 39.17 O
ATOM 4 OP2 G B1298 7.225 -48.687 -35.993 1.00 44.46 O
ATOM 5 O5' G B1298 6.927 -46.293 -35.390 1.00 47.91 O
ATOM 6 C5' G B1298 8.034 -45.952 -36.236 1.00 50.71 C
ATOM 7 C4' G B1298 8.316 -44.459 -36.230 1.00 45.85 C
ATOM 8 O4' G B1298 7.309 -43.751 -36.982 1.00 48.37 O
ATOM 9 C3' G B1298 8.420 -43.781 -34.873 1.00 49.26 C
ATOM 10 O3' G B1298 9.804 -43.827 -34.493 1.00 43.17 O
ATOM 11 C2' G B1298 7.989 -42.351 -35.202 1.00 53.63 C
ATOM 12 O2' G B1298 9.068 -41.649 -35.775 1.00 51.98 O
ATOM 13 C1' G B1298 6.950 -42.561 -36.310 1.00 51.60 C
ATOM 14 N9 G B1298 5.543 -42.704 -35.914 1.00 50.73 N
ATOM 15 C8 G B1298 4.729 -43.747 -36.287 1.00 53.77 C
ATOM 16 N7 G B1298 3.521 -43.658 -35.813 1.00 53.33 N
ATOM 17 C5 G B1298 3.518 -42.485 -35.078 1.00 52.48 C
ATOM 18 C6 G B1298 2.464 -41.871 -34.343 1.00 51.45 C
ATOM 19 O6 G B1298 1.303 -42.250 -34.203 1.00 48.18 O
ATOM 20 N1 G B1298 2.871 -40.689 -33.746 1.00 52.53 N
ATOM 21 C2 G B1298 4.124 -40.143 -33.857 1.00 55.90 C
ATOM 22 N2 G B1298 4.296 -38.971 -33.221 1.00 55.68 N
ATOM 23 N3 G B1298 5.129 -40.703 -34.547 1.00 52.69 N
ATOM 24 C4 G B1298 4.756 -41.870 -35.128 1.00 49.13 C
ATOM 25 P G B1299 10.237 -44.026 -32.953 1.00 40.19 P
ATOM 26 OP1 G B1299 11.727 -44.046 -32.975 1.00 40.12 O
ATOM 27 OP2 G B1299 9.492 -45.185 -32.400 1.00 51.12 O
ATOM 28 O5' G B1299 9.739 -42.714 -32.188 1.00 39.73 O
TER
Atoms:
OP1: (9.813,-53.006,-35.208)
OP2: (11.898,-52.891,-33.745)
C3': (8.648,-49.016,-33.515)
C1': (9.689,-48.645,-31.409)
C5': (8.459,-51.481,-32.885)
O4': (8.820,-49.744,-31.236)
C8: (12.003,-49.612,-30.817)
O2': (10.297,-47.229,-33.253)
C6: (12.788,-48.218,-27.664)
C5: (12.338,-48.698,-28.924)
C4: (11.092,-48.258,-29.356)
P: (10.425,-52.921,-33.866)
C4': (8.159,-50.052,-32.502)
C2': (9.972,-48.551,-32.907)
C2: (10.792,-47.047,-27.548)
N1: (11.975,-47.377,-26.994)
N3: (10.259,-47.429,-28.713)
N6: (13.954,-48.540,-27.101)
N7: (12.903,-49.553,-29.861)
N9: (10.882,-48.844,-30.577)
O5': (9.848,-51.624,-33.145)
O3': (7.719,-47.923,-33.613)
OP2: (11.898,-52.891,-33.745)
C3': (8.648,-49.016,-33.515)
C1': (9.689,-48.645,-31.409)
C5': (8.459,-51.481,-32.885)
O4': (8.820,-49.744,-31.236)
C8: (12.003,-49.612,-30.817)
O2': (10.297,-47.229,-33.253)
C6: (12.788,-48.218,-27.664)
C5: (12.338,-48.698,-28.924)
C4: (11.092,-48.258,-29.356)
P: (10.425,-52.921,-33.866)
C4': (8.159,-50.052,-32.502)
C2': (9.972,-48.551,-32.907)
C2: (10.792,-47.047,-27.548)
N1: (11.975,-47.377,-26.994)
N3: (10.259,-47.429,-28.713)
N6: (13.954,-48.540,-27.101)
N7: (12.903,-49.553,-29.861)
N9: (10.882,-48.844,-30.577)
O5': (9.848,-51.624,-33.145)
O3': (7.719,-47.923,-33.613)
OP1: (5.340,-47.996,-34.367)
OP2: (7.225,-48.687,-35.993)
C3': (8.420,-43.781,-34.873)
C1': (6.950,-42.561,-36.310)
C5': (8.034,-45.952,-36.236)
O6: (1.303,-42.250,-34.203)
O4': (7.309,-43.751,-36.982)
C8: (4.729,-43.747,-36.287)
C2: (4.124,-40.143,-33.857)
C6: (2.464,-41.871,-34.343)
C5: (3.518,-42.485,-35.078)
C4: (4.756,-41.870,-35.128)
P: (6.728,-47.803,-34.888)
C4': (8.316,-44.459,-36.230)
C2': (7.989,-42.351,-35.202)
O2': (9.068,-41.649,-35.775)
N1: (2.871,-40.689,-33.746)
N2: (4.296,-38.971,-33.221)
N3: (5.129,-40.703,-34.547)
N7: (3.521,-43.658,-35.813)
N9: (5.543,-42.704,-35.914)
O5': (6.927,-46.293,-35.390)
O3': (9.804,-43.827,-34.493)
OP2: (7.225,-48.687,-35.993)
C3': (8.420,-43.781,-34.873)
C1': (6.950,-42.561,-36.310)
C5': (8.034,-45.952,-36.236)
O6: (1.303,-42.250,-34.203)
O4': (7.309,-43.751,-36.982)
C8: (4.729,-43.747,-36.287)
C2: (4.124,-40.143,-33.857)
C6: (2.464,-41.871,-34.343)
C5: (3.518,-42.485,-35.078)
C4: (4.756,-41.870,-35.128)
P: (6.728,-47.803,-34.888)
C4': (8.316,-44.459,-36.230)
C2': (7.989,-42.351,-35.202)
O2': (9.068,-41.649,-35.775)
N1: (2.871,-40.689,-33.746)
N2: (4.296,-38.971,-33.221)
N3: (5.129,-40.703,-34.547)
N7: (3.521,-43.658,-35.813)
N9: (5.543,-42.704,-35.914)
O5': (6.927,-46.293,-35.390)
O3': (9.804,-43.827,-34.493)
Image (generated by PyMOL):