ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1291:A1292

Extra

PDB:
ATOM 1 O3' U A1290 10.364 -53.772 -31.864 1.00 31.54 O
ATOM 2 P A A1291 10.969 -52.664 -32.858 1.00 34.40 P
ATOM 3 OP1 A A1291 10.304 -52.858 -34.179 1.00 32.70 O
ATOM 4 OP2 A A1291 12.455 -52.768 -32.796 1.00 49.04 O
ATOM 5 O5' A A1291 10.488 -51.297 -32.185 1.00 31.17 O
ATOM 6 C5' A A1291 9.104 -51.050 -31.958 1.00 35.06 C
ATOM 7 C4' A A1291 8.828 -49.617 -31.573 1.00 36.04 C
ATOM 8 O4' A A1291 9.468 -49.338 -30.315 1.00 37.33 O
ATOM 9 C3' A A1291 9.322 -48.555 -32.543 1.00 32.94 C
ATOM 10 O3' A A1291 8.455 -47.427 -32.482 1.00 41.55 O
ATOM 11 C2' A A1291 10.659 -48.160 -31.945 1.00 35.68 C
ATOM 12 O2' A A1291 11.083 -46.861 -32.308 1.00 39.96 O
ATOM 13 C1' A A1291 10.355 -48.255 -30.456 1.00 34.57 C
ATOM 14 N9 A A1291 11.514 -48.526 -29.607 1.00 37.28 N
ATOM 15 C8 A A1291 12.407 -49.556 -29.716 1.00 39.36 C
ATOM 16 N7 A A1291 13.309 -49.559 -28.771 1.00 40.05 N
ATOM 17 C5 A A1291 12.966 -48.471 -27.984 1.00 40.39 C
ATOM 18 C6 A A1291 13.530 -47.940 -26.822 1.00 41.59 C
ATOM 19 N6 A A1291 14.610 -48.489 -26.280 1.00 40.16 N
ATOM 20 N1 A A1291 12.960 -46.851 -26.252 1.00 37.49 N
ATOM 21 C2 A A1291 11.882 -46.345 -26.849 1.00 38.84 C
ATOM 22 N3 A A1291 11.268 -46.761 -27.958 1.00 40.29 N
ATOM 23 C4 A A1291 11.860 -47.838 -28.478 1.00 36.49 C
ATOM 24 P G A1292 7.272 -47.235 -33.544 1.00 45.87 P
ATOM 25 OP1 G A1292 6.001 -47.207 -32.771 1.00 59.33 O
ATOM 26 OP2 G A1292 7.457 -48.274 -34.604 1.00 46.33 O
ATOM 27 O5' G A1292 7.572 -45.798 -34.144 1.00 33.53 O
TER

ATOM 1 O3' A B1291 8.455 -47.427 -32.482 1.00 41.55 O
ATOM 2 P G B1292 7.272 -47.235 -33.544 1.00 45.87 P
ATOM 3 OP1 G B1292 6.001 -47.207 -32.771 1.00 59.33 O
ATOM 4 OP2 G B1292 7.457 -48.274 -34.604 1.00 46.33 O
ATOM 5 O5' G B1292 7.572 -45.798 -34.144 1.00 33.53 O
ATOM 6 C5' G B1292 8.729 -45.580 -34.924 1.00 47.76 C
ATOM 7 C4' G B1292 8.971 -44.115 -35.152 1.00 44.73 C
ATOM 8 O4' G B1292 7.835 -43.546 -35.843 1.00 41.50 O
ATOM 9 C3' G B1292 9.134 -43.260 -33.901 1.00 40.59 C
ATOM 10 O3' G B1292 10.479 -43.242 -33.421 1.00 35.24 O
ATOM 11 C2' G B1292 8.654 -41.897 -34.376 1.00 41.75 C
ATOM 12 O2' G B1292 9.661 -41.265 -35.152 1.00 53.77 O
ATOM 13 C1' G B1292 7.530 -42.283 -35.318 1.00 39.07 C
ATOM 14 N9 G B1292 6.220 -42.371 -34.652 1.00 36.56 N
ATOM 15 C8 G B1292 5.392 -43.436 -34.876 1.00 39.40 C
ATOM 16 N7 G B1292 4.252 -43.357 -34.260 1.00 40.13 N
ATOM 17 C5 G B1292 4.326 -42.156 -33.602 1.00 42.75 C
ATOM 18 C6 G B1292 3.363 -41.566 -32.775 1.00 45.99 C
ATOM 19 O6 G B1292 2.266 -42.020 -32.479 1.00 45.77 O
ATOM 20 N1 G B1292 3.780 -40.341 -32.284 1.00 44.93 N
ATOM 21 C2 G B1292 4.981 -39.777 -32.568 1.00 40.18 C
ATOM 22 N2 G B1292 5.147 -38.601 -31.982 1.00 39.39 N
ATOM 23 N3 G B1292 5.907 -40.317 -33.349 1.00 39.13 N
ATOM 24 C4 G B1292 5.519 -41.509 -33.837 1.00 39.13 C
ATOM 25 P G B1293 10.855 -43.768 -31.941 1.00 46.43 P
ATOM 26 OP1 G B1293 12.336 -44.037 -31.940 1.00 43.06 O
ATOM 27 OP2 G B1293 9.927 -44.873 -31.605 1.00 41.75 O
ATOM 28 O5' G B1293 10.528 -42.512 -31.035 1.00 31.37 O
TER

Atoms:
OP1: (10.304,-52.858,-34.179)
OP2: (12.455,-52.768,-32.796)
C3': (9.322,-48.555,-32.543)
C1': (10.355,-48.255,-30.456)
C5': (9.104,-51.050,-31.958)
O4': (9.468,-49.338,-30.315)
C8: (12.407,-49.556,-29.716)
O2': (11.083,-46.861,-32.308)
C6: (13.530,-47.940,-26.822)
C5: (12.966,-48.471,-27.984)
C4: (11.860,-47.838,-28.478)
P: (10.969,-52.664,-32.858)
C4': (8.828,-49.617,-31.573)
C2': (10.659,-48.160,-31.945)
C2: (11.882,-46.345,-26.849)
N1: (12.960,-46.851,-26.252)
N3: (11.268,-46.761,-27.958)
N6: (14.610,-48.489,-26.280)
N7: (13.309,-49.559,-28.771)
N9: (11.514,-48.526,-29.607)
O5': (10.488,-51.297,-32.185)
O3': (8.455,-47.427,-32.482)
OP1: (6.001,-47.207,-32.771)
OP2: (7.457,-48.274,-34.604)
C3': (9.134,-43.260,-33.901)
C1': (7.530,-42.283,-35.318)
C5': (8.729,-45.580,-34.924)
O6: (2.266,-42.020,-32.479)
O4': (7.835,-43.546,-35.843)
C8: (5.392,-43.436,-34.876)
C2: (4.981,-39.777,-32.568)
C6: (3.363,-41.566,-32.775)
C5: (4.326,-42.156,-33.602)
C4: (5.519,-41.509,-33.837)
P: (7.272,-47.235,-33.544)
C4': (8.971,-44.115,-35.152)
C2': (8.654,-41.897,-34.376)
O2': (9.661,-41.265,-35.152)
N1: (3.780,-40.341,-32.284)
N2: (5.147,-38.601,-31.982)
N3: (5.907,-40.317,-33.349)
N7: (4.252,-43.357,-34.260)
N9: (6.220,-42.371,-34.652)
O5': (7.572,-45.798,-34.144)
O3': (10.479,-43.242,-33.421)
Image (generated by PyMOL):
PyMOL image
show in jmol