ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1291:A1292

Extra

PDB:
ATOM 1 O3' U A1290 10.514 -53.589 -31.762 1.00 33.93 O
ATOM 2 P A A1291 11.065 -52.524 -32.840 1.00 44.73 P
ATOM 3 OP1 A A1291 10.362 -52.782 -34.126 1.00 36.38 O
ATOM 4 OP2 A A1291 12.557 -52.612 -32.820 1.00 54.61 O
ATOM 5 O5' A A1291 10.588 -51.138 -32.221 1.00 30.71 O
ATOM 6 C5' A A1291 9.222 -50.893 -31.957 1.00 30.97 C
ATOM 7 C4' A A1291 8.970 -49.467 -31.542 1.00 33.66 C
ATOM 8 O4' A A1291 9.612 -49.222 -30.279 1.00 36.51 O
ATOM 9 C3' A A1291 9.477 -48.394 -32.493 1.00 28.80 C
ATOM 10 O3' A A1291 8.619 -47.267 -32.418 1.00 47.56 O
ATOM 11 C2' A A1291 10.803 -48.005 -31.880 1.00 34.17 C
ATOM 12 O2' A A1291 11.216 -46.700 -32.201 1.00 34.52 O
ATOM 13 C1' A A1291 10.505 -48.139 -30.396 1.00 37.12 C
ATOM 14 N9 A A1291 11.684 -48.435 -29.570 1.00 43.83 N
ATOM 15 C8 A A1291 12.614 -49.443 -29.722 1.00 40.19 C
ATOM 16 N7 A A1291 13.537 -49.454 -28.802 1.00 37.63 N
ATOM 17 C5 A A1291 13.190 -48.390 -28.002 1.00 37.20 C
ATOM 18 C6 A A1291 13.769 -47.874 -26.863 1.00 38.38 C
ATOM 19 N6 A A1291 14.855 -48.401 -26.353 1.00 43.46 N
ATOM 20 N1 A A1291 13.216 -46.808 -26.270 1.00 43.87 N
ATOM 21 C2 A A1291 12.104 -46.304 -26.819 1.00 44.91 C
ATOM 22 N3 A A1291 11.447 -46.704 -27.900 1.00 41.02 N
ATOM 23 C4 A A1291 12.058 -47.761 -28.445 1.00 39.46 C
ATOM 24 P G A1292 7.463 -47.022 -33.500 1.00 43.86 P
ATOM 25 OP1 G A1292 6.174 -47.050 -32.748 1.00 51.51 O
ATOM 26 OP2 G A1292 7.675 -47.994 -34.621 1.00 43.43 O
ATOM 27 O5' G A1292 7.775 -45.552 -34.008 1.00 21.33 O
TER

ATOM 1 O3' A B1291 8.619 -47.267 -32.418 1.00 47.56 O
ATOM 2 P G B1292 7.463 -47.022 -33.500 1.00 43.86 P
ATOM 3 OP1 G B1292 6.174 -47.050 -32.748 1.00 51.51 O
ATOM 4 OP2 G B1292 7.675 -47.994 -34.621 1.00 43.43 O
ATOM 5 O5' G B1292 7.775 -45.552 -34.008 1.00 21.33 O
ATOM 6 C5' G B1292 8.771 -45.348 -34.988 1.00 41.06 C
ATOM 7 C4' G B1292 9.090 -43.890 -35.163 1.00 40.97 C
ATOM 8 O4' G B1292 7.992 -43.225 -35.852 1.00 39.07 O
ATOM 9 C3' G B1292 9.292 -43.103 -33.883 1.00 38.97 C
ATOM 10 O3' G B1292 10.629 -43.182 -33.408 1.00 32.26 O
ATOM 11 C2' G B1292 8.880 -41.695 -34.301 1.00 44.59 C
ATOM 12 O2' G B1292 9.923 -41.083 -35.039 1.00 44.30 O
ATOM 13 C1' G B1292 7.732 -41.984 -35.265 1.00 39.40 C
ATOM 14 N9 G B1292 6.417 -42.081 -34.595 1.00 41.03 N
ATOM 15 C8 G B1292 5.634 -43.187 -34.788 1.00 40.41 C
ATOM 16 N7 G B1292 4.498 -43.168 -34.159 1.00 36.83 N
ATOM 17 C5 G B1292 4.521 -41.951 -33.516 1.00 41.47 C
ATOM 18 C6 G B1292 3.529 -41.396 -32.688 1.00 45.60 C
ATOM 19 O6 G B1292 2.443 -41.882 -32.363 1.00 45.26 O
ATOM 20 N1 G B1292 3.895 -40.150 -32.220 1.00 44.98 N
ATOM 21 C2 G B1292 5.064 -39.532 -32.520 1.00 42.28 C
ATOM 22 N2 G B1292 5.176 -38.335 -31.938 1.00 43.81 N
ATOM 23 N3 G B1292 6.011 -40.038 -33.298 1.00 37.11 N
ATOM 24 C4 G B1292 5.682 -41.249 -33.769 1.00 38.64 C
ATOM 25 P G B1293 10.968 -43.620 -31.890 1.00 35.43 P
ATOM 26 OP1 G B1293 12.446 -43.861 -31.819 1.00 51.93 O
ATOM 27 OP2 G B1293 10.057 -44.725 -31.527 1.00 45.68 O
ATOM 28 O5' G B1293 10.591 -42.329 -31.057 1.00 30.59 O
TER

Atoms:
OP1: (10.362,-52.782,-34.126)
OP2: (12.557,-52.612,-32.820)
C3': (9.477,-48.394,-32.493)
C1': (10.505,-48.139,-30.396)
C5': (9.222,-50.893,-31.957)
O4': (9.612,-49.222,-30.279)
C8: (12.614,-49.443,-29.722)
O2': (11.216,-46.700,-32.201)
C6: (13.769,-47.874,-26.863)
C5: (13.190,-48.390,-28.002)
C4: (12.058,-47.761,-28.445)
P: (11.065,-52.524,-32.840)
C4': (8.970,-49.467,-31.542)
C2': (10.803,-48.005,-31.880)
C2: (12.104,-46.304,-26.819)
N1: (13.216,-46.808,-26.270)
N3: (11.447,-46.704,-27.900)
N6: (14.855,-48.401,-26.353)
N7: (13.537,-49.454,-28.802)
N9: (11.684,-48.435,-29.570)
O5': (10.588,-51.138,-32.221)
O3': (8.619,-47.267,-32.418)
OP1: (6.174,-47.050,-32.748)
OP2: (7.675,-47.994,-34.621)
C3': (9.292,-43.103,-33.883)
C1': (7.732,-41.984,-35.265)
C5': (8.771,-45.348,-34.988)
O6: (2.443,-41.882,-32.363)
O4': (7.992,-43.225,-35.852)
C8: (5.634,-43.187,-34.788)
C2: (5.064,-39.532,-32.520)
C6: (3.529,-41.396,-32.688)
C5: (4.521,-41.951,-33.516)
C4: (5.682,-41.249,-33.769)
P: (7.463,-47.022,-33.500)
C4': (9.090,-43.890,-35.163)
C2': (8.880,-41.695,-34.301)
O2': (9.923,-41.083,-35.039)
N1: (3.895,-40.150,-32.220)
N2: (5.176,-38.335,-31.938)
N3: (6.011,-40.038,-33.298)
N7: (4.498,-43.168,-34.159)
N9: (6.417,-42.081,-34.595)
O5': (7.775,-45.552,-34.008)
O3': (10.629,-43.182,-33.408)
Image (generated by PyMOL):
PyMOL image
show in jmol