Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1335:A1336
Extra
PDB:
ATOM 1 O3' G A1334 -4.140 -50.609 32.612 1.00 0.01 O
ATOM 2 P A A1335 -4.836 -49.598 33.605 1.00 0.01 P
ATOM 3 OP1 A A1335 -4.157 -49.714 34.904 1.00 0.01 O
ATOM 4 OP2 A A1335 -6.269 -49.873 33.540 1.00 0.01 O
ATOM 5 O5' A A1335 -4.514 -48.202 32.922 1.00 0.01 O
ATOM 6 C5' A A1335 -3.169 -47.777 32.752 1.00 0.01 C
ATOM 7 C4' A A1335 -3.063 -46.301 32.426 1.00 0.01 C
ATOM 8 O4' A A1335 -3.833 -46.027 31.236 1.00 0.01 O
ATOM 9 C3' A A1335 -3.586 -45.326 33.484 1.00 0.01 C
ATOM 10 O3' A A1335 -2.881 -44.092 33.363 1.00 0.01 O
ATOM 11 C2' A A1335 -5.011 -45.093 33.022 1.00 0.01 C
ATOM 12 O2' A A1335 -5.589 -43.896 33.488 1.00 0.01 O
ATOM 13 C1' A A1335 -4.812 -45.054 31.521 1.00 0.01 C
ATOM 14 N9 A A1335 -5.991 -45.384 30.747 1.00 0.01 N
ATOM 15 C8 A A1335 -6.948 -46.346 30.920 1.00 0.01 C
ATOM 16 N7 A A1335 -7.849 -46.356 29.966 1.00 0.01 N
ATOM 17 C5 A A1335 -7.427 -45.355 29.112 1.00 0.01 C
ATOM 18 C6 A A1335 -7.931 -44.852 27.930 1.00 0.01 C
ATOM 19 N6 A A1335 -9.017 -45.275 27.303 1.00 0.01 N
ATOM 20 N1 A A1335 -7.254 -43.872 27.358 1.00 0.01 N
ATOM 21 C2 A A1335 -6.149 -43.415 27.933 1.00 0.01 C
ATOM 22 N3 A A1335 -5.574 -43.781 29.052 1.00 0.01 N
ATOM 23 C4 A A1335 -6.282 -44.768 29.582 1.00 0.01 C
ATOM 24 P G A1336 -1.644 -43.736 34.316 1.00 0.01 P
ATOM 25 OP1 G A1336 -0.479 -43.403 33.418 1.00 0.01 O
ATOM 26 OP2 G A1336 -1.515 -44.856 35.280 1.00 0.01 O
ATOM 27 O5' G A1336 -2.163 -42.419 35.067 1.00 0.01 O
TER
ATOM 1 O3' A B1335 -2.881 -44.092 33.363 1.00 0.01 O
ATOM 2 P G B1336 -1.644 -43.736 34.316 1.00 0.01 P
ATOM 3 OP1 G B1336 -0.479 -43.403 33.418 1.00 0.01 O
ATOM 4 OP2 G B1336 -1.515 -44.856 35.280 1.00 0.01 O
ATOM 5 O5' G B1336 -2.163 -42.419 35.067 1.00 0.01 O
ATOM 6 C5' G B1336 -3.472 -42.368 35.616 1.00 0.01 C
ATOM 7 C4' G B1336 -3.869 -40.966 36.014 1.00 0.01 C
ATOM 8 O4' G B1336 -2.822 -40.352 36.806 1.00 0.01 O
ATOM 9 C3' G B1336 -4.128 -40.002 34.868 1.00 0.01 C
ATOM 10 O3' G B1336 -5.470 -40.043 34.440 1.00 0.01 O
ATOM 11 C2' G B1336 -3.735 -38.649 35.436 1.00 0.01 C
ATOM 12 O2' G B1336 -4.817 -38.075 36.150 1.00 0.01 O
ATOM 13 C1' G B1336 -2.634 -39.019 36.419 1.00 0.01 C
ATOM 14 N9 G B1336 -1.298 -38.918 35.824 1.00 0.01 N
ATOM 15 C8 G B1336 -0.391 -39.920 35.988 1.00 0.01 C
ATOM 16 N7 G B1336 0.735 -39.662 35.418 1.00 0.01 N
ATOM 17 C5 G B1336 0.573 -38.420 34.860 1.00 0.01 C
ATOM 18 C6 G B1336 1.503 -37.670 34.136 1.00 0.01 C
ATOM 19 O6 G B1336 2.648 -37.973 33.826 1.00 0.01 O
ATOM 20 N1 G B1336 0.993 -36.466 33.740 1.00 0.01 N
ATOM 21 C2 G B1336 -0.258 -36.044 33.997 1.00 0.01 C
ATOM 22 N2 G B1336 -0.486 -34.844 33.469 1.00 0.01 N
ATOM 23 N3 G B1336 -1.166 -36.728 34.687 1.00 0.01 N
ATOM 24 C4 G B1336 -0.681 -37.922 35.093 1.00 0.01 C
ATOM 25 P U B1337 -5.847 -40.758 33.078 1.00 0.01 P
ATOM 26 OP1 U B1337 -7.271 -41.076 33.151 1.00 0.01 O
ATOM 27 OP2 U B1337 -4.885 -41.846 32.882 1.00 0.01 O
ATOM 28 O5' U B1337 -5.601 -39.614 32.009 1.00 0.01 O
TER
ATOM 2 P A A1335 -4.836 -49.598 33.605 1.00 0.01 P
ATOM 3 OP1 A A1335 -4.157 -49.714 34.904 1.00 0.01 O
ATOM 4 OP2 A A1335 -6.269 -49.873 33.540 1.00 0.01 O
ATOM 5 O5' A A1335 -4.514 -48.202 32.922 1.00 0.01 O
ATOM 6 C5' A A1335 -3.169 -47.777 32.752 1.00 0.01 C
ATOM 7 C4' A A1335 -3.063 -46.301 32.426 1.00 0.01 C
ATOM 8 O4' A A1335 -3.833 -46.027 31.236 1.00 0.01 O
ATOM 9 C3' A A1335 -3.586 -45.326 33.484 1.00 0.01 C
ATOM 10 O3' A A1335 -2.881 -44.092 33.363 1.00 0.01 O
ATOM 11 C2' A A1335 -5.011 -45.093 33.022 1.00 0.01 C
ATOM 12 O2' A A1335 -5.589 -43.896 33.488 1.00 0.01 O
ATOM 13 C1' A A1335 -4.812 -45.054 31.521 1.00 0.01 C
ATOM 14 N9 A A1335 -5.991 -45.384 30.747 1.00 0.01 N
ATOM 15 C8 A A1335 -6.948 -46.346 30.920 1.00 0.01 C
ATOM 16 N7 A A1335 -7.849 -46.356 29.966 1.00 0.01 N
ATOM 17 C5 A A1335 -7.427 -45.355 29.112 1.00 0.01 C
ATOM 18 C6 A A1335 -7.931 -44.852 27.930 1.00 0.01 C
ATOM 19 N6 A A1335 -9.017 -45.275 27.303 1.00 0.01 N
ATOM 20 N1 A A1335 -7.254 -43.872 27.358 1.00 0.01 N
ATOM 21 C2 A A1335 -6.149 -43.415 27.933 1.00 0.01 C
ATOM 22 N3 A A1335 -5.574 -43.781 29.052 1.00 0.01 N
ATOM 23 C4 A A1335 -6.282 -44.768 29.582 1.00 0.01 C
ATOM 24 P G A1336 -1.644 -43.736 34.316 1.00 0.01 P
ATOM 25 OP1 G A1336 -0.479 -43.403 33.418 1.00 0.01 O
ATOM 26 OP2 G A1336 -1.515 -44.856 35.280 1.00 0.01 O
ATOM 27 O5' G A1336 -2.163 -42.419 35.067 1.00 0.01 O
TER
ATOM 1 O3' A B1335 -2.881 -44.092 33.363 1.00 0.01 O
ATOM 2 P G B1336 -1.644 -43.736 34.316 1.00 0.01 P
ATOM 3 OP1 G B1336 -0.479 -43.403 33.418 1.00 0.01 O
ATOM 4 OP2 G B1336 -1.515 -44.856 35.280 1.00 0.01 O
ATOM 5 O5' G B1336 -2.163 -42.419 35.067 1.00 0.01 O
ATOM 6 C5' G B1336 -3.472 -42.368 35.616 1.00 0.01 C
ATOM 7 C4' G B1336 -3.869 -40.966 36.014 1.00 0.01 C
ATOM 8 O4' G B1336 -2.822 -40.352 36.806 1.00 0.01 O
ATOM 9 C3' G B1336 -4.128 -40.002 34.868 1.00 0.01 C
ATOM 10 O3' G B1336 -5.470 -40.043 34.440 1.00 0.01 O
ATOM 11 C2' G B1336 -3.735 -38.649 35.436 1.00 0.01 C
ATOM 12 O2' G B1336 -4.817 -38.075 36.150 1.00 0.01 O
ATOM 13 C1' G B1336 -2.634 -39.019 36.419 1.00 0.01 C
ATOM 14 N9 G B1336 -1.298 -38.918 35.824 1.00 0.01 N
ATOM 15 C8 G B1336 -0.391 -39.920 35.988 1.00 0.01 C
ATOM 16 N7 G B1336 0.735 -39.662 35.418 1.00 0.01 N
ATOM 17 C5 G B1336 0.573 -38.420 34.860 1.00 0.01 C
ATOM 18 C6 G B1336 1.503 -37.670 34.136 1.00 0.01 C
ATOM 19 O6 G B1336 2.648 -37.973 33.826 1.00 0.01 O
ATOM 20 N1 G B1336 0.993 -36.466 33.740 1.00 0.01 N
ATOM 21 C2 G B1336 -0.258 -36.044 33.997 1.00 0.01 C
ATOM 22 N2 G B1336 -0.486 -34.844 33.469 1.00 0.01 N
ATOM 23 N3 G B1336 -1.166 -36.728 34.687 1.00 0.01 N
ATOM 24 C4 G B1336 -0.681 -37.922 35.093 1.00 0.01 C
ATOM 25 P U B1337 -5.847 -40.758 33.078 1.00 0.01 P
ATOM 26 OP1 U B1337 -7.271 -41.076 33.151 1.00 0.01 O
ATOM 27 OP2 U B1337 -4.885 -41.846 32.882 1.00 0.01 O
ATOM 28 O5' U B1337 -5.601 -39.614 32.009 1.00 0.01 O
TER
Atoms:
OP1: (-4.157,-49.714,34.904)
OP2: (-6.269,-49.873,33.540)
C3': (-3.586,-45.326,33.484)
C1': (-4.812,-45.054,31.521)
C5': (-3.169,-47.777,32.752)
O4': (-3.833,-46.027,31.236)
C8: (-6.948,-46.346,30.920)
O2': (-5.589,-43.896,33.488)
C6: (-7.931,-44.852,27.930)
C5: (-7.427,-45.355,29.112)
C4: (-6.282,-44.768,29.582)
P: (-4.836,-49.598,33.605)
C4': (-3.063,-46.301,32.426)
C2': (-5.011,-45.093,33.022)
C2: (-6.149,-43.415,27.933)
N1: (-7.254,-43.872,27.358)
N3: (-5.574,-43.781,29.052)
N6: (-9.017,-45.275,27.303)
N7: (-7.849,-46.356,29.966)
N9: (-5.991,-45.384,30.747)
O5': (-4.514,-48.202,32.922)
O3': (-2.881,-44.092,33.363)
OP2: (-6.269,-49.873,33.540)
C3': (-3.586,-45.326,33.484)
C1': (-4.812,-45.054,31.521)
C5': (-3.169,-47.777,32.752)
O4': (-3.833,-46.027,31.236)
C8: (-6.948,-46.346,30.920)
O2': (-5.589,-43.896,33.488)
C6: (-7.931,-44.852,27.930)
C5: (-7.427,-45.355,29.112)
C4: (-6.282,-44.768,29.582)
P: (-4.836,-49.598,33.605)
C4': (-3.063,-46.301,32.426)
C2': (-5.011,-45.093,33.022)
C2: (-6.149,-43.415,27.933)
N1: (-7.254,-43.872,27.358)
N3: (-5.574,-43.781,29.052)
N6: (-9.017,-45.275,27.303)
N7: (-7.849,-46.356,29.966)
N9: (-5.991,-45.384,30.747)
O5': (-4.514,-48.202,32.922)
O3': (-2.881,-44.092,33.363)
OP1: (-0.479,-43.403,33.418)
OP2: (-1.515,-44.856,35.280)
C3': (-4.128,-40.002,34.868)
C1': (-2.634,-39.019,36.419)
C5': (-3.472,-42.368,35.616)
O6: (2.648,-37.973,33.826)
O4': (-2.822,-40.352,36.806)
C8: (-0.391,-39.920,35.988)
C2: (-0.258,-36.044,33.997)
C6: (1.503,-37.670,34.136)
C5: (0.573,-38.420,34.860)
C4: (-0.681,-37.922,35.093)
P: (-1.644,-43.736,34.316)
C4': (-3.869,-40.966,36.014)
C2': (-3.735,-38.649,35.436)
O2': (-4.817,-38.075,36.150)
N1: (0.993,-36.466,33.740)
N2: (-0.486,-34.844,33.469)
N3: (-1.166,-36.728,34.687)
N7: (0.735,-39.662,35.418)
N9: (-1.298,-38.918,35.824)
O5': (-2.163,-42.419,35.067)
O3': (-5.470,-40.043,34.440)
OP2: (-1.515,-44.856,35.280)
C3': (-4.128,-40.002,34.868)
C1': (-2.634,-39.019,36.419)
C5': (-3.472,-42.368,35.616)
O6: (2.648,-37.973,33.826)
O4': (-2.822,-40.352,36.806)
C8: (-0.391,-39.920,35.988)
C2: (-0.258,-36.044,33.997)
C6: (1.503,-37.670,34.136)
C5: (0.573,-38.420,34.860)
C4: (-0.681,-37.922,35.093)
P: (-1.644,-43.736,34.316)
C4': (-3.869,-40.966,36.014)
C2': (-3.735,-38.649,35.436)
O2': (-4.817,-38.075,36.150)
N1: (0.993,-36.466,33.740)
N2: (-0.486,-34.844,33.469)
N3: (-1.166,-36.728,34.687)
N7: (0.735,-39.662,35.418)
N9: (-1.298,-38.918,35.824)
O5': (-2.163,-42.419,35.067)
O3': (-5.470,-40.043,34.440)
Image (generated by PyMOL):