Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1218:1219
Extra
PDB:
ATOM 1 O3' G A 217 98.958 1.254 94.478 1.00 40.86 O
ATOM 2 P A A 218 99.123 1.120 96.050 1.00 42.82 P
ATOM 3 OP1 A A 218 99.031 -0.352 96.352 1.00 42.80 O
ATOM 4 OP2 A A 218 98.151 2.065 96.660 1.00 42.75 O
ATOM 5 O5' A A 218 100.595 1.656 96.333 1.00 43.33 O
ATOM 6 C5' A A 218 101.725 0.852 96.061 1.00 43.55 C
ATOM 7 C4' A A 218 102.591 0.687 97.268 1.00 44.09 C
ATOM 8 O4' A A 218 102.937 1.989 97.804 1.00 44.39 O
ATOM 9 C3' A A 218 101.973 -0.075 98.417 1.00 44.16 C
ATOM 10 O3' A A 218 102.944 -0.926 98.947 1.00 44.55 O
ATOM 11 C2' A A 218 101.683 1.017 99.438 1.00 44.39 C
ATOM 12 O2' A A 218 101.664 0.580 100.767 1.00 44.72 O
ATOM 13 C1' A A 218 102.831 1.934 99.195 1.00 44.72 C
ATOM 14 N9 A A 218 102.666 3.279 99.730 1.00 44.89 N
ATOM 15 C8 A A 218 101.583 4.053 99.778 1.00 44.64 C
ATOM 16 N7 A A 218 101.737 5.219 100.320 1.00 44.92 N
ATOM 17 C5 A A 218 103.044 5.223 100.714 1.00 45.41 C
ATOM 18 C6 A A 218 103.827 6.209 101.377 1.00 45.90 C
ATOM 19 N6 A A 218 103.409 7.425 101.780 1.00 46.00 N
ATOM 20 N1 A A 218 105.108 5.881 101.597 1.00 46.33 N
ATOM 21 C2 A A 218 105.547 4.679 101.178 1.00 46.25 C
ATOM 22 N3 A A 218 104.926 3.663 100.564 1.00 45.82 N
ATOM 23 C4 A A 218 103.634 4.021 100.345 1.00 45.39 C
ATOM 24 P A A 219 103.468 -2.176 98.106 1.00 55.48 P
ATOM 25 OP1 A A 219 104.786 -1.830 97.537 1.00 55.74 O
ATOM 26 OP2 A A 219 102.377 -2.565 97.179 1.00 54.91 O
ATOM 27 O5' A A 219 103.650 -3.267 99.241 1.00 55.79 O
TER
ATOM 1 O3' A B 218 102.944 -0.926 98.947 1.00 44.55 O
ATOM 2 P A B 219 103.468 -2.176 98.106 1.00 55.48 P
ATOM 3 OP1 A B 219 104.786 -1.830 97.537 1.00 55.74 O
ATOM 4 OP2 A B 219 102.377 -2.565 97.179 1.00 54.91 O
ATOM 5 O5' A B 219 103.650 -3.267 99.241 1.00 55.79 O
ATOM 6 C5' A B 219 102.676 -3.422 100.247 1.00 55.76 C
ATOM 7 C4' A B 219 103.283 -3.999 101.484 1.00 56.27 C
ATOM 8 O4' A B 219 104.068 -5.158 101.134 1.00 56.39 O
ATOM 9 C3' A B 219 104.240 -3.093 102.228 1.00 56.79 C
ATOM 10 O3' A B 219 103.563 -2.215 103.117 1.00 56.86 O
ATOM 11 C2' A B 219 105.161 -4.076 102.936 1.00 57.25 C
ATOM 12 O2' A B 219 104.564 -4.508 104.135 1.00 57.40 O
ATOM 13 C1' A B 219 105.193 -5.257 101.960 1.00 56.96 C
ATOM 14 N9 A B 219 106.374 -5.253 101.091 1.00 57.10 N
ATOM 15 C8 A B 219 106.296 -5.181 99.730 1.00 56.70 C
ATOM 16 N7 A B 219 107.454 -5.193 99.115 1.00 56.91 N
ATOM 17 C5 A B 219 108.356 -5.302 100.153 1.00 57.47 C
ATOM 18 C6 A B 219 109.749 -5.346 100.173 1.00 57.94 C
ATOM 19 N6 A B 219 110.474 -5.309 99.067 1.00 57.88 N
ATOM 20 N1 A B 219 110.378 -5.417 101.360 1.00 58.47 N
ATOM 21 C2 A B 219 109.654 -5.456 102.469 1.00 58.54 C
ATOM 22 N3 A B 219 108.339 -5.418 102.576 1.00 58.14 N
ATOM 23 C4 A B 219 107.721 -5.346 101.377 1.00 57.60 C
ATOM 24 P U B 220 104.092 -0.719 103.349 1.00 55.62 P
ATOM 25 OP1 U B 220 103.347 -0.165 104.519 1.00 55.76 O
ATOM 26 OP2 U B 220 104.043 -0.011 102.072 1.00 55.28 O
ATOM 27 O5' U B 220 105.608 -0.956 103.725 1.00 56.19 O
TER
ATOM 2 P A A 218 99.123 1.120 96.050 1.00 42.82 P
ATOM 3 OP1 A A 218 99.031 -0.352 96.352 1.00 42.80 O
ATOM 4 OP2 A A 218 98.151 2.065 96.660 1.00 42.75 O
ATOM 5 O5' A A 218 100.595 1.656 96.333 1.00 43.33 O
ATOM 6 C5' A A 218 101.725 0.852 96.061 1.00 43.55 C
ATOM 7 C4' A A 218 102.591 0.687 97.268 1.00 44.09 C
ATOM 8 O4' A A 218 102.937 1.989 97.804 1.00 44.39 O
ATOM 9 C3' A A 218 101.973 -0.075 98.417 1.00 44.16 C
ATOM 10 O3' A A 218 102.944 -0.926 98.947 1.00 44.55 O
ATOM 11 C2' A A 218 101.683 1.017 99.438 1.00 44.39 C
ATOM 12 O2' A A 218 101.664 0.580 100.767 1.00 44.72 O
ATOM 13 C1' A A 218 102.831 1.934 99.195 1.00 44.72 C
ATOM 14 N9 A A 218 102.666 3.279 99.730 1.00 44.89 N
ATOM 15 C8 A A 218 101.583 4.053 99.778 1.00 44.64 C
ATOM 16 N7 A A 218 101.737 5.219 100.320 1.00 44.92 N
ATOM 17 C5 A A 218 103.044 5.223 100.714 1.00 45.41 C
ATOM 18 C6 A A 218 103.827 6.209 101.377 1.00 45.90 C
ATOM 19 N6 A A 218 103.409 7.425 101.780 1.00 46.00 N
ATOM 20 N1 A A 218 105.108 5.881 101.597 1.00 46.33 N
ATOM 21 C2 A A 218 105.547 4.679 101.178 1.00 46.25 C
ATOM 22 N3 A A 218 104.926 3.663 100.564 1.00 45.82 N
ATOM 23 C4 A A 218 103.634 4.021 100.345 1.00 45.39 C
ATOM 24 P A A 219 103.468 -2.176 98.106 1.00 55.48 P
ATOM 25 OP1 A A 219 104.786 -1.830 97.537 1.00 55.74 O
ATOM 26 OP2 A A 219 102.377 -2.565 97.179 1.00 54.91 O
ATOM 27 O5' A A 219 103.650 -3.267 99.241 1.00 55.79 O
TER
ATOM 1 O3' A B 218 102.944 -0.926 98.947 1.00 44.55 O
ATOM 2 P A B 219 103.468 -2.176 98.106 1.00 55.48 P
ATOM 3 OP1 A B 219 104.786 -1.830 97.537 1.00 55.74 O
ATOM 4 OP2 A B 219 102.377 -2.565 97.179 1.00 54.91 O
ATOM 5 O5' A B 219 103.650 -3.267 99.241 1.00 55.79 O
ATOM 6 C5' A B 219 102.676 -3.422 100.247 1.00 55.76 C
ATOM 7 C4' A B 219 103.283 -3.999 101.484 1.00 56.27 C
ATOM 8 O4' A B 219 104.068 -5.158 101.134 1.00 56.39 O
ATOM 9 C3' A B 219 104.240 -3.093 102.228 1.00 56.79 C
ATOM 10 O3' A B 219 103.563 -2.215 103.117 1.00 56.86 O
ATOM 11 C2' A B 219 105.161 -4.076 102.936 1.00 57.25 C
ATOM 12 O2' A B 219 104.564 -4.508 104.135 1.00 57.40 O
ATOM 13 C1' A B 219 105.193 -5.257 101.960 1.00 56.96 C
ATOM 14 N9 A B 219 106.374 -5.253 101.091 1.00 57.10 N
ATOM 15 C8 A B 219 106.296 -5.181 99.730 1.00 56.70 C
ATOM 16 N7 A B 219 107.454 -5.193 99.115 1.00 56.91 N
ATOM 17 C5 A B 219 108.356 -5.302 100.153 1.00 57.47 C
ATOM 18 C6 A B 219 109.749 -5.346 100.173 1.00 57.94 C
ATOM 19 N6 A B 219 110.474 -5.309 99.067 1.00 57.88 N
ATOM 20 N1 A B 219 110.378 -5.417 101.360 1.00 58.47 N
ATOM 21 C2 A B 219 109.654 -5.456 102.469 1.00 58.54 C
ATOM 22 N3 A B 219 108.339 -5.418 102.576 1.00 58.14 N
ATOM 23 C4 A B 219 107.721 -5.346 101.377 1.00 57.60 C
ATOM 24 P U B 220 104.092 -0.719 103.349 1.00 55.62 P
ATOM 25 OP1 U B 220 103.347 -0.165 104.519 1.00 55.76 O
ATOM 26 OP2 U B 220 104.043 -0.011 102.072 1.00 55.28 O
ATOM 27 O5' U B 220 105.608 -0.956 103.725 1.00 56.19 O
TER
Atoms:
OP1: (99.031,-0.352,96.352)
OP2: (98.151,2.065,96.660)
C3': (101.973,-0.075,98.417)
C1': (102.831,1.934,99.195)
C5': (101.725,0.852,96.061)
O4': (102.937,1.989,97.804)
C8: (101.583,4.053,99.778)
O2': (101.664,0.580,100.767)
C6: (103.827,6.209,101.377)
C5: (103.044,5.223,100.714)
C4: (103.634,4.021,100.345)
P: (99.123,1.120,96.050)
C4': (102.591,0.687,97.268)
C2': (101.683,1.017,99.438)
C2: (105.547,4.679,101.178)
N1: (105.108,5.881,101.597)
N3: (104.926,3.663,100.564)
N6: (103.409,7.425,101.780)
N7: (101.737,5.219,100.320)
N9: (102.666,3.279,99.730)
O5': (100.595,1.656,96.333)
O3': (102.944,-0.926,98.947)
OP2: (98.151,2.065,96.660)
C3': (101.973,-0.075,98.417)
C1': (102.831,1.934,99.195)
C5': (101.725,0.852,96.061)
O4': (102.937,1.989,97.804)
C8: (101.583,4.053,99.778)
O2': (101.664,0.580,100.767)
C6: (103.827,6.209,101.377)
C5: (103.044,5.223,100.714)
C4: (103.634,4.021,100.345)
P: (99.123,1.120,96.050)
C4': (102.591,0.687,97.268)
C2': (101.683,1.017,99.438)
C2: (105.547,4.679,101.178)
N1: (105.108,5.881,101.597)
N3: (104.926,3.663,100.564)
N6: (103.409,7.425,101.780)
N7: (101.737,5.219,100.320)
N9: (102.666,3.279,99.730)
O5': (100.595,1.656,96.333)
O3': (102.944,-0.926,98.947)
OP1: (104.786,-1.830,97.537)
OP2: (102.377,-2.565,97.179)
C3': (104.240,-3.093,102.228)
C1': (105.193,-5.257,101.960)
C5': (102.676,-3.422,100.247)
O4': (104.068,-5.158,101.134)
C8: (106.296,-5.181,99.730)
O2': (104.564,-4.508,104.135)
C6: (109.749,-5.346,100.173)
C5: (108.356,-5.302,100.153)
C4: (107.721,-5.346,101.377)
P: (103.468,-2.176,98.106)
C4': (103.283,-3.999,101.484)
C2': (105.161,-4.076,102.936)
C2: (109.654,-5.456,102.469)
N1: (110.378,-5.417,101.360)
N3: (108.339,-5.418,102.576)
N6: (110.474,-5.309,99.067)
N7: (107.454,-5.193,99.115)
N9: (106.374,-5.253,101.091)
O5': (103.650,-3.267,99.241)
O3': (103.563,-2.215,103.117)
OP2: (102.377,-2.565,97.179)
C3': (104.240,-3.093,102.228)
C1': (105.193,-5.257,101.960)
C5': (102.676,-3.422,100.247)
O4': (104.068,-5.158,101.134)
C8: (106.296,-5.181,99.730)
O2': (104.564,-4.508,104.135)
C6: (109.749,-5.346,100.173)
C5: (108.356,-5.302,100.153)
C4: (107.721,-5.346,101.377)
P: (103.468,-2.176,98.106)
C4': (103.283,-3.999,101.484)
C2': (105.161,-4.076,102.936)
C2: (109.654,-5.456,102.469)
N1: (110.378,-5.417,101.360)
N3: (108.339,-5.418,102.576)
N6: (110.474,-5.309,99.067)
N7: (107.454,-5.193,99.115)
N9: (106.374,-5.253,101.091)
O5': (103.650,-3.267,99.241)
O3': (103.563,-2.215,103.117)
Image (generated by PyMOL):