Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0345:0344
Extra
PDB:
ATOM 1 O3' C A 344 53.509 120.951 15.496 1.00 82.47 O
ATOM 2 P A A 345 54.531 120.481 14.342 1.00 84.50 P
ATOM 3 OP1 A A 345 53.742 120.183 13.111 1.00 84.55 O
ATOM 4 OP2 A A 345 55.435 119.443 14.912 1.00 83.34 O
ATOM 5 O5' A A 345 55.409 121.769 14.047 1.00 84.33 O
ATOM 6 C5' A A 345 56.471 121.731 13.083 1.00 85.31 C
ATOM 7 C4' A A 345 56.504 123.022 12.315 1.00 86.05 C
ATOM 8 O4' A A 345 55.454 123.023 11.304 1.00 86.79 O
ATOM 9 C3' A A 345 56.270 124.261 13.172 1.00 86.61 C
ATOM 10 O3' A A 345 57.053 125.323 12.662 1.00 88.44 O
ATOM 11 C2' A A 345 54.783 124.531 12.953 1.00 86.72 C
ATOM 12 O2' A A 345 54.394 125.868 13.195 1.00 87.09 O
ATOM 13 C1' A A 345 54.640 124.166 11.478 1.00 86.37 C
ATOM 14 N9 A A 345 53.277 123.862 11.037 1.00 85.88 N
ATOM 15 C8 A A 345 52.512 122.742 11.277 1.00 85.40 C
ATOM 16 N7 A A 345 51.311 122.798 10.750 1.00 84.88 N
ATOM 17 C5 A A 345 51.279 124.036 10.116 1.00 85.84 C
ATOM 18 C6 A A 345 50.273 124.709 9.377 1.00 85.07 C
ATOM 19 N6 A A 345 49.054 124.209 9.150 1.00 84.40 N
ATOM 20 N1 A A 345 50.570 125.931 8.878 1.00 84.75 N
ATOM 21 C2 A A 345 51.793 126.440 9.108 1.00 85.63 C
ATOM 22 N3 A A 345 52.817 125.912 9.787 1.00 85.89 N
ATOM 23 C4 A A 345 52.490 124.697 10.274 1.00 86.41 C
ATOM 24 P G A 346 58.449 125.686 13.365 1.00 90.36 P
ATOM 25 OP1 G A 346 58.807 124.564 14.264 1.00 91.34 O
ATOM 26 OP2 G A 346 58.342 127.063 13.913 1.00 91.13 O
ATOM 27 O5' G A 346 59.488 125.693 12.155 1.00 92.04 O
TER
ATOM 1 O3' C B 343 53.911 126.598 18.172 1.00 73.76 O
ATOM 2 P C B 344 54.709 125.838 16.998 1.00 73.54 P
ATOM 3 OP1 C B 344 55.871 125.137 17.613 1.00 73.63 O
ATOM 4 OP2 C B 344 54.939 126.811 15.901 1.00 74.42 O
ATOM 5 O5' C B 344 53.705 124.704 16.501 1.00 74.95 O
ATOM 6 C5' C B 344 53.417 123.567 17.337 1.00 76.53 C
ATOM 7 C4' C B 344 52.371 122.692 16.696 1.00 77.70 C
ATOM 8 O4' C B 344 51.163 123.460 16.475 1.00 78.21 O
ATOM 9 C3' C B 344 52.727 122.134 15.330 1.00 79.02 C
ATOM 10 O3' C B 344 53.509 120.951 15.496 1.00 82.47 O
ATOM 11 C2' C B 344 51.355 121.847 14.726 1.00 79.00 C
ATOM 12 O2' C B 344 50.801 120.625 15.159 1.00 78.59 O
ATOM 13 C1' C B 344 50.514 122.988 15.309 1.00 79.61 C
ATOM 14 N1 C B 344 50.278 124.124 14.403 1.00 81.01 N
ATOM 15 C2 C B 344 49.058 124.188 13.707 1.00 81.39 C
ATOM 16 O2 C B 344 48.218 123.287 13.870 1.00 81.03 O
ATOM 17 N3 C B 344 48.827 125.230 12.876 1.00 82.32 N
ATOM 18 C4 C B 344 49.753 126.185 12.726 1.00 82.65 C
ATOM 19 N4 C B 344 49.479 127.195 11.892 1.00 82.41 N
ATOM 20 C5 C B 344 51.000 126.146 13.423 1.00 81.73 C
ATOM 21 C6 C B 344 51.219 125.107 14.240 1.00 81.49 C
ATOM 22 P A B 345 54.531 120.481 14.342 1.00 84.50 P
ATOM 23 OP1 A B 345 53.742 120.183 13.111 1.00 84.55 O
ATOM 24 OP2 A B 345 55.435 119.443 14.912 1.00 83.34 O
ATOM 25 O5' A B 345 55.409 121.769 14.047 1.00 84.33 O
TER
ATOM 2 P A A 345 54.531 120.481 14.342 1.00 84.50 P
ATOM 3 OP1 A A 345 53.742 120.183 13.111 1.00 84.55 O
ATOM 4 OP2 A A 345 55.435 119.443 14.912 1.00 83.34 O
ATOM 5 O5' A A 345 55.409 121.769 14.047 1.00 84.33 O
ATOM 6 C5' A A 345 56.471 121.731 13.083 1.00 85.31 C
ATOM 7 C4' A A 345 56.504 123.022 12.315 1.00 86.05 C
ATOM 8 O4' A A 345 55.454 123.023 11.304 1.00 86.79 O
ATOM 9 C3' A A 345 56.270 124.261 13.172 1.00 86.61 C
ATOM 10 O3' A A 345 57.053 125.323 12.662 1.00 88.44 O
ATOM 11 C2' A A 345 54.783 124.531 12.953 1.00 86.72 C
ATOM 12 O2' A A 345 54.394 125.868 13.195 1.00 87.09 O
ATOM 13 C1' A A 345 54.640 124.166 11.478 1.00 86.37 C
ATOM 14 N9 A A 345 53.277 123.862 11.037 1.00 85.88 N
ATOM 15 C8 A A 345 52.512 122.742 11.277 1.00 85.40 C
ATOM 16 N7 A A 345 51.311 122.798 10.750 1.00 84.88 N
ATOM 17 C5 A A 345 51.279 124.036 10.116 1.00 85.84 C
ATOM 18 C6 A A 345 50.273 124.709 9.377 1.00 85.07 C
ATOM 19 N6 A A 345 49.054 124.209 9.150 1.00 84.40 N
ATOM 20 N1 A A 345 50.570 125.931 8.878 1.00 84.75 N
ATOM 21 C2 A A 345 51.793 126.440 9.108 1.00 85.63 C
ATOM 22 N3 A A 345 52.817 125.912 9.787 1.00 85.89 N
ATOM 23 C4 A A 345 52.490 124.697 10.274 1.00 86.41 C
ATOM 24 P G A 346 58.449 125.686 13.365 1.00 90.36 P
ATOM 25 OP1 G A 346 58.807 124.564 14.264 1.00 91.34 O
ATOM 26 OP2 G A 346 58.342 127.063 13.913 1.00 91.13 O
ATOM 27 O5' G A 346 59.488 125.693 12.155 1.00 92.04 O
TER
ATOM 1 O3' C B 343 53.911 126.598 18.172 1.00 73.76 O
ATOM 2 P C B 344 54.709 125.838 16.998 1.00 73.54 P
ATOM 3 OP1 C B 344 55.871 125.137 17.613 1.00 73.63 O
ATOM 4 OP2 C B 344 54.939 126.811 15.901 1.00 74.42 O
ATOM 5 O5' C B 344 53.705 124.704 16.501 1.00 74.95 O
ATOM 6 C5' C B 344 53.417 123.567 17.337 1.00 76.53 C
ATOM 7 C4' C B 344 52.371 122.692 16.696 1.00 77.70 C
ATOM 8 O4' C B 344 51.163 123.460 16.475 1.00 78.21 O
ATOM 9 C3' C B 344 52.727 122.134 15.330 1.00 79.02 C
ATOM 10 O3' C B 344 53.509 120.951 15.496 1.00 82.47 O
ATOM 11 C2' C B 344 51.355 121.847 14.726 1.00 79.00 C
ATOM 12 O2' C B 344 50.801 120.625 15.159 1.00 78.59 O
ATOM 13 C1' C B 344 50.514 122.988 15.309 1.00 79.61 C
ATOM 14 N1 C B 344 50.278 124.124 14.403 1.00 81.01 N
ATOM 15 C2 C B 344 49.058 124.188 13.707 1.00 81.39 C
ATOM 16 O2 C B 344 48.218 123.287 13.870 1.00 81.03 O
ATOM 17 N3 C B 344 48.827 125.230 12.876 1.00 82.32 N
ATOM 18 C4 C B 344 49.753 126.185 12.726 1.00 82.65 C
ATOM 19 N4 C B 344 49.479 127.195 11.892 1.00 82.41 N
ATOM 20 C5 C B 344 51.000 126.146 13.423 1.00 81.73 C
ATOM 21 C6 C B 344 51.219 125.107 14.240 1.00 81.49 C
ATOM 22 P A B 345 54.531 120.481 14.342 1.00 84.50 P
ATOM 23 OP1 A B 345 53.742 120.183 13.111 1.00 84.55 O
ATOM 24 OP2 A B 345 55.435 119.443 14.912 1.00 83.34 O
ATOM 25 O5' A B 345 55.409 121.769 14.047 1.00 84.33 O
TER
Atoms:
OP1: (53.742,120.183,13.111)
OP2: (55.435,119.443,14.912)
C3': (56.270,124.261,13.172)
C1': (54.640,124.166,11.478)
C5': (56.471,121.731,13.083)
O4': (55.454,123.023,11.304)
C8: (52.512,122.742,11.277)
O2': (54.394,125.868,13.195)
C6: (50.273,124.709,9.377)
C5: (51.279,124.036,10.116)
C4: (52.490,124.697,10.274)
P: (54.531,120.481,14.342)
C4': (56.504,123.022,12.315)
C2': (54.783,124.531,12.953)
C2: (51.793,126.440,9.108)
N1: (50.570,125.931,8.878)
N3: (52.817,125.912,9.787)
N6: (49.054,124.209,9.150)
N7: (51.311,122.798,10.750)
N9: (53.277,123.862,11.037)
O5': (55.409,121.769,14.047)
O3': (57.053,125.323,12.662)
OP2: (55.435,119.443,14.912)
C3': (56.270,124.261,13.172)
C1': (54.640,124.166,11.478)
C5': (56.471,121.731,13.083)
O4': (55.454,123.023,11.304)
C8: (52.512,122.742,11.277)
O2': (54.394,125.868,13.195)
C6: (50.273,124.709,9.377)
C5: (51.279,124.036,10.116)
C4: (52.490,124.697,10.274)
P: (54.531,120.481,14.342)
C4': (56.504,123.022,12.315)
C2': (54.783,124.531,12.953)
C2: (51.793,126.440,9.108)
N1: (50.570,125.931,8.878)
N3: (52.817,125.912,9.787)
N6: (49.054,124.209,9.150)
N7: (51.311,122.798,10.750)
N9: (53.277,123.862,11.037)
O5': (55.409,121.769,14.047)
O3': (57.053,125.323,12.662)
C2: (49.058,124.188,13.707)
OP1: (55.871,125.137,17.613)
OP2: (54.939,126.811,15.901)
C4: (49.753,126.185,12.726)
O5': (53.705,124.704,16.501)
C3': (52.727,122.134,15.330)
C1': (50.514,122.988,15.309)
O4': (51.163,123.460,16.475)
C5': (53.417,123.567,17.337)
P: (54.709,125.838,16.998)
O2: (48.218,123.287,13.870)
C4': (52.371,122.692,16.696)
C2': (51.355,121.847,14.726)
O2': (50.801,120.625,15.159)
N1: (50.278,124.124,14.403)
N3: (48.827,125.230,12.876)
N4: (49.479,127.195,11.892)
C6: (51.219,125.107,14.240)
C5: (51.000,126.146,13.423)
O3': (53.509,120.951,15.496)
OP1: (55.871,125.137,17.613)
OP2: (54.939,126.811,15.901)
C4: (49.753,126.185,12.726)
O5': (53.705,124.704,16.501)
C3': (52.727,122.134,15.330)
C1': (50.514,122.988,15.309)
O4': (51.163,123.460,16.475)
C5': (53.417,123.567,17.337)
P: (54.709,125.838,16.998)
O2: (48.218,123.287,13.870)
C4': (52.371,122.692,16.696)
C2': (51.355,121.847,14.726)
O2': (50.801,120.625,15.159)
N1: (50.278,124.124,14.403)
N3: (48.827,125.230,12.876)
N4: (49.479,127.195,11.892)
C6: (51.219,125.107,14.240)
C5: (51.000,126.146,13.423)
O3': (53.509,120.951,15.496)
Image (generated by PyMOL):