ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1022:A1023

Extra

PDB:
ATOM 1 O3' A A1021 -119.902 -84.670 -28.196 1.00 12.09 O
ATOM 2 P A A1022 -119.617 -83.385 -29.129 1.00 57.96 P
ATOM 3 OP1 A A1022 -120.912 -82.847 -29.640 1.00 42.55 O
ATOM 4 OP2 A A1022 -118.529 -83.735 -30.085 1.00 42.62 O
ATOM 5 O5' A A1022 -119.051 -82.302 -28.112 1.00 47.00 O
ATOM 6 C5' A A1022 -117.752 -82.467 -27.522 1.00 47.00 C
ATOM 7 C4' A A1022 -117.644 -81.659 -26.250 1.00 47.00 C
ATOM 8 O4' A A1022 -118.731 -82.007 -25.339 1.00 47.00 O
ATOM 9 C3' A A1022 -116.370 -81.924 -25.464 1.00 47.00 C
ATOM 10 O3' A A1022 -115.265 -81.167 -25.915 1.00 47.00 O
ATOM 11 C2' A A1022 -116.809 -81.629 -24.040 1.00 47.00 C
ATOM 12 O2' A A1022 -116.904 -80.245 -23.778 1.00 47.00 O
ATOM 13 C1' A A1022 -118.211 -82.241 -24.043 1.00 47.00 C
ATOM 14 N9 A A1022 -118.135 -83.696 -23.869 1.00 54.11 N
ATOM 15 C8 A A1022 -117.101 -84.545 -24.244 1.00 54.13 C
ATOM 16 N7 A A1022 -117.324 -85.808 -23.980 1.00 54.15 N
ATOM 17 C5 A A1022 -118.576 -85.798 -23.391 1.00 54.13 C
ATOM 18 C6 A A1022 -119.358 -86.817 -22.893 1.00 54.16 C
ATOM 19 N6 A A1022 -118.989 -88.094 -22.918 1.00 54.18 N
ATOM 20 N1 A A1022 -120.551 -86.487 -22.362 1.00 54.13 N
ATOM 21 C2 A A1022 -120.917 -85.193 -22.350 1.00 54.09 C
ATOM 22 N3 A A1022 -120.264 -84.133 -22.799 1.00 54.05 N
ATOM 23 C4 A A1022 -119.086 -84.506 -23.312 1.00 54.08 C
ATOM 24 P G A1023 -113.890 -81.918 -26.279 1.00 26.03 P
ATOM 25 OP1 G A1023 -112.797 -80.955 -25.959 1.00 48.85 O
ATOM 26 OP2 G A1023 -113.983 -82.485 -27.651 1.00 49.17 O
ATOM 27 O5' G A1023 -113.822 -83.128 -25.248 1.00 67.10 O
TER

ATOM 1 O3' A B1022 -115.265 -81.167 -25.915 1.00 47.00 O
ATOM 2 P G B1023 -113.890 -81.918 -26.279 1.00 26.03 P
ATOM 3 OP1 G B1023 -112.797 -80.955 -25.959 1.00 48.85 O
ATOM 4 OP2 G B1023 -113.983 -82.485 -27.651 1.00 49.17 O
ATOM 5 O5' G B1023 -113.822 -83.128 -25.248 1.00 67.10 O
ATOM 6 C5' G B1023 -112.781 -83.189 -24.264 1.00 67.10 C
ATOM 7 C4' G B1023 -113.300 -83.805 -22.991 1.00 67.10 C
ATOM 8 O4' G B1023 -113.596 -85.204 -23.215 1.00 67.10 O
ATOM 9 C3' G B1023 -112.301 -83.796 -21.844 1.00 67.10 C
ATOM 10 O3' G B1023 -112.319 -82.476 -21.253 1.00 67.10 O
ATOM 11 C2' G B1023 -112.695 -85.013 -20.995 1.00 67.10 C
ATOM 12 O2' G B1023 -113.659 -84.785 -19.997 1.00 67.10 O
ATOM 13 C1' G B1023 -113.357 -85.930 -22.025 1.00 67.10 C
ATOM 14 N9 G B1023 -112.708 -87.202 -22.340 1.00 19.65 N
ATOM 15 C8 G B1023 -111.483 -87.414 -22.933 1.00 19.52 C
ATOM 16 N7 G B1023 -111.225 -88.681 -23.135 1.00 19.45 N
ATOM 17 C5 G B1023 -112.340 -89.340 -22.636 1.00 19.39 C
ATOM 18 C6 G B1023 -112.653 -90.717 -22.603 1.00 19.42 C
ATOM 19 O6 G B1023 -111.994 -91.672 -23.044 1.00 19.43 O
ATOM 20 N1 G B1023 -113.878 -90.944 -21.993 1.00 19.45 N
ATOM 21 C2 G B1023 -114.703 -89.971 -21.497 1.00 19.40 C
ATOM 22 N2 G B1023 -115.840 -90.375 -20.940 1.00 19.44 N
ATOM 23 N3 G B1023 -114.436 -88.690 -21.543 1.00 19.29 N
ATOM 24 C4 G B1023 -113.249 -88.444 -22.120 1.00 19.44 C
ATOM 25 P U B1024 -112.825 -82.237 -19.741 1.00 84.86 P
ATOM 26 OP1 U B1024 -112.571 -80.806 -19.435 1.00107.42 O
ATOM 27 OP2 U B1024 -112.232 -83.282 -18.853 1.00107.36 O
ATOM 28 O5' U B1024 -114.411 -82.412 -19.840 1.00 20.57 O
TER

Atoms:
OP1: (-120.912,-82.847,-29.640)
OP2: (-118.529,-83.735,-30.085)
C3': (-116.370,-81.924,-25.464)
C1': (-118.211,-82.241,-24.043)
C5': (-117.752,-82.467,-27.522)
O4': (-118.731,-82.007,-25.339)
C8: (-117.101,-84.545,-24.244)
O2': (-116.904,-80.245,-23.778)
C6: (-119.358,-86.817,-22.893)
C5: (-118.576,-85.798,-23.391)
C4: (-119.086,-84.506,-23.312)
P: (-119.617,-83.385,-29.129)
C4': (-117.644,-81.659,-26.250)
C2': (-116.809,-81.629,-24.040)
C2: (-120.917,-85.193,-22.350)
N1: (-120.551,-86.487,-22.362)
N3: (-120.264,-84.133,-22.799)
N6: (-118.989,-88.094,-22.918)
N7: (-117.324,-85.808,-23.980)
N9: (-118.135,-83.696,-23.869)
O5': (-119.051,-82.302,-28.112)
O3': (-115.265,-81.167,-25.915)
OP1: (-112.797,-80.955,-25.959)
OP2: (-113.983,-82.485,-27.651)
C3': (-112.301,-83.796,-21.844)
C1': (-113.357,-85.930,-22.025)
C5': (-112.781,-83.189,-24.264)
O6: (-111.994,-91.672,-23.044)
O4': (-113.596,-85.204,-23.215)
C8: (-111.483,-87.414,-22.933)
C2: (-114.703,-89.971,-21.497)
C6: (-112.653,-90.717,-22.603)
C5: (-112.340,-89.340,-22.636)
C4: (-113.249,-88.444,-22.120)
P: (-113.890,-81.918,-26.279)
C4': (-113.300,-83.805,-22.991)
C2': (-112.695,-85.013,-20.995)
O2': (-113.659,-84.785,-19.997)
N1: (-113.878,-90.944,-21.993)
N2: (-115.840,-90.375,-20.940)
N3: (-114.436,-88.690,-21.543)
N7: (-111.225,-88.681,-23.135)
N9: (-112.708,-87.202,-22.340)
O5': (-113.822,-83.128,-25.248)
O3': (-112.319,-82.476,-21.253)
Image (generated by PyMOL):
PyMOL image
show in jmol