Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1953:A1952
Extra
PDB:
ATOM 1 O3' C A1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 2 P A A1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 3 OP1 A A1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 4 OP2 A A1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 5 O5' A A1953 102.021 108.299 105.056 1.00 66.76 O
ATOM 6 C5' A A1953 102.683 108.421 103.792 1.00 64.86 C
ATOM 7 C4' A A1953 102.382 109.766 103.193 1.00 63.85 C
ATOM 8 O4' A A1953 101.017 109.786 102.684 1.00 64.00 O
ATOM 9 C3' A A1953 102.523 110.932 104.173 1.00 62.08 C
ATOM 10 O3' A A1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 11 C2' A A1953 101.065 111.238 104.543 1.00 62.78 C
ATOM 12 O2' A A1953 100.819 112.592 104.900 1.00 61.48 O
ATOM 13 C1' A A1953 100.340 110.890 103.239 1.00 63.49 C
ATOM 14 N9 A A1953 98.913 110.576 103.371 1.00 63.87 N
ATOM 15 C8 A A1953 98.322 109.506 103.990 1.00 64.20 C
ATOM 16 N7 A A1953 97.015 109.511 103.916 1.00 65.61 N
ATOM 17 C5 A A1953 96.724 110.661 103.197 1.00 65.85 C
ATOM 18 C6 A A1953 95.507 111.230 102.763 1.00 67.68 C
ATOM 19 N6 A A1953 94.306 110.684 102.990 1.00 68.90 N
ATOM 20 N1 A A1953 95.569 112.392 102.074 1.00 67.55 N
ATOM 21 C2 A A1953 96.769 112.928 101.841 1.00 66.94 C
ATOM 22 N3 A A1953 97.975 112.484 102.186 1.00 65.24 N
ATOM 23 C4 A A1953 97.882 111.333 102.867 1.00 64.57 C
ATOM 24 P U A1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 25 OP1 U A1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 26 OP2 U A1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 27 O5' U A1954 104.260 114.179 103.204 1.00 57.14 O
TER
ATOM 1 O3' G B1951 103.463 112.575 108.176 1.00 60.05 O
ATOM 2 P C B1952 101.934 112.384 108.600 1.00 60.37 P
ATOM 3 OP1 C B1952 101.284 113.431 107.771 1.00 59.16 O
ATOM 4 OP2 C B1952 101.786 112.429 110.080 1.00 59.95 O
ATOM 5 O5' C B1952 101.516 110.926 108.076 1.00 61.94 O
ATOM 6 C5' C B1952 101.556 109.764 108.943 1.00 62.21 C
ATOM 7 C4' C B1952 100.353 108.868 108.722 1.00 64.02 C
ATOM 8 O4' C B1952 99.131 109.584 109.048 1.00 64.99 O
ATOM 9 C3' C B1952 100.121 108.340 107.317 1.00 65.43 C
ATOM 10 O3' C B1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 11 C2' C B1952 98.621 108.035 107.303 1.00 65.48 C
ATOM 12 O2' C B1952 98.280 106.764 107.809 1.00 65.47 O
ATOM 13 C1' C B1952 98.062 109.123 108.223 1.00 64.90 C
ATOM 14 N1 C B1952 97.509 110.269 107.469 1.00 65.12 N
ATOM 15 C2 C B1952 96.116 110.337 107.213 1.00 64.98 C
ATOM 16 O2 C B1952 95.372 109.426 107.623 1.00 65.84 O
ATOM 17 N3 C B1952 95.626 111.398 106.524 1.00 64.72 N
ATOM 18 C4 C B1952 96.454 112.361 106.102 1.00 64.84 C
ATOM 19 N4 C B1952 95.935 113.390 105.440 1.00 64.57 N
ATOM 20 C5 C B1952 97.858 112.312 106.342 1.00 64.81 C
ATOM 21 C6 C B1952 98.337 111.261 107.020 1.00 65.02 C
ATOM 22 P A B1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 23 OP1 A B1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 24 OP2 A B1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 25 O5' A B1953 102.021 108.299 105.056 1.00 66.76 O
TER
ATOM 2 P A A1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 3 OP1 A A1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 4 OP2 A A1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 5 O5' A A1953 102.021 108.299 105.056 1.00 66.76 O
ATOM 6 C5' A A1953 102.683 108.421 103.792 1.00 64.86 C
ATOM 7 C4' A A1953 102.382 109.766 103.193 1.00 63.85 C
ATOM 8 O4' A A1953 101.017 109.786 102.684 1.00 64.00 O
ATOM 9 C3' A A1953 102.523 110.932 104.173 1.00 62.08 C
ATOM 10 O3' A A1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 11 C2' A A1953 101.065 111.238 104.543 1.00 62.78 C
ATOM 12 O2' A A1953 100.819 112.592 104.900 1.00 61.48 O
ATOM 13 C1' A A1953 100.340 110.890 103.239 1.00 63.49 C
ATOM 14 N9 A A1953 98.913 110.576 103.371 1.00 63.87 N
ATOM 15 C8 A A1953 98.322 109.506 103.990 1.00 64.20 C
ATOM 16 N7 A A1953 97.015 109.511 103.916 1.00 65.61 N
ATOM 17 C5 A A1953 96.724 110.661 103.197 1.00 65.85 C
ATOM 18 C6 A A1953 95.507 111.230 102.763 1.00 67.68 C
ATOM 19 N6 A A1953 94.306 110.684 102.990 1.00 68.90 N
ATOM 20 N1 A A1953 95.569 112.392 102.074 1.00 67.55 N
ATOM 21 C2 A A1953 96.769 112.928 101.841 1.00 66.94 C
ATOM 22 N3 A A1953 97.975 112.484 102.186 1.00 65.24 N
ATOM 23 C4 A A1953 97.882 111.333 102.867 1.00 64.57 C
ATOM 24 P U A1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 25 OP1 U A1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 26 OP2 U A1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 27 O5' U A1954 104.260 114.179 103.204 1.00 57.14 O
TER
ATOM 1 O3' G B1951 103.463 112.575 108.176 1.00 60.05 O
ATOM 2 P C B1952 101.934 112.384 108.600 1.00 60.37 P
ATOM 3 OP1 C B1952 101.284 113.431 107.771 1.00 59.16 O
ATOM 4 OP2 C B1952 101.786 112.429 110.080 1.00 59.95 O
ATOM 5 O5' C B1952 101.516 110.926 108.076 1.00 61.94 O
ATOM 6 C5' C B1952 101.556 109.764 108.943 1.00 62.21 C
ATOM 7 C4' C B1952 100.353 108.868 108.722 1.00 64.02 C
ATOM 8 O4' C B1952 99.131 109.584 109.048 1.00 64.99 O
ATOM 9 C3' C B1952 100.121 108.340 107.317 1.00 65.43 C
ATOM 10 O3' C B1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 11 C2' C B1952 98.621 108.035 107.303 1.00 65.48 C
ATOM 12 O2' C B1952 98.280 106.764 107.809 1.00 65.47 O
ATOM 13 C1' C B1952 98.062 109.123 108.223 1.00 64.90 C
ATOM 14 N1 C B1952 97.509 110.269 107.469 1.00 65.12 N
ATOM 15 C2 C B1952 96.116 110.337 107.213 1.00 64.98 C
ATOM 16 O2 C B1952 95.372 109.426 107.623 1.00 65.84 O
ATOM 17 N3 C B1952 95.626 111.398 106.524 1.00 64.72 N
ATOM 18 C4 C B1952 96.454 112.361 106.102 1.00 64.84 C
ATOM 19 N4 C B1952 95.935 113.390 105.440 1.00 64.57 N
ATOM 20 C5 C B1952 97.858 112.312 106.342 1.00 64.81 C
ATOM 21 C6 C B1952 98.337 111.261 107.020 1.00 65.02 C
ATOM 22 P A B1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 23 OP1 A B1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 24 OP2 A B1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 25 O5' A B1953 102.021 108.299 105.056 1.00 66.76 O
TER
Atoms:
OP1: (100.222,106.662,104.654)
OP2: (102.539,105.933,105.522)
C3': (102.523,110.932,104.173)
C1': (100.340,110.890,103.239)
C5': (102.683,108.421,103.792)
O4': (101.017,109.786,102.684)
C8: (98.322,109.506,103.990)
O2': (100.819,112.592,104.900)
C6: (95.507,111.230,102.763)
C5: (96.724,110.661,103.197)
C4: (97.882,111.333,102.867)
P: (101.415,106.911,105.516)
C4': (102.382,109.766,103.193)
C2': (101.065,111.238,104.543)
C2: (96.769,112.928,101.841)
N1: (95.569,112.392,102.074)
N3: (97.975,112.484,102.186)
N6: (94.306,110.684,102.990)
N7: (97.015,109.511,103.916)
N9: (98.913,110.576,103.371)
O5': (102.021,108.299,105.056)
O3': (103.072,112.031,103.433)
OP2: (102.539,105.933,105.522)
C3': (102.523,110.932,104.173)
C1': (100.340,110.890,103.239)
C5': (102.683,108.421,103.792)
O4': (101.017,109.786,102.684)
C8: (98.322,109.506,103.990)
O2': (100.819,112.592,104.900)
C6: (95.507,111.230,102.763)
C5: (96.724,110.661,103.197)
C4: (97.882,111.333,102.867)
P: (101.415,106.911,105.516)
C4': (102.382,109.766,103.193)
C2': (101.065,111.238,104.543)
C2: (96.769,112.928,101.841)
N1: (95.569,112.392,102.074)
N3: (97.975,112.484,102.186)
N6: (94.306,110.684,102.990)
N7: (97.015,109.511,103.916)
N9: (98.913,110.576,103.371)
O5': (102.021,108.299,105.056)
O3': (103.072,112.031,103.433)
C2: (96.116,110.337,107.213)
OP1: (101.284,113.431,107.771)
OP2: (101.786,112.429,110.080)
C4: (96.454,112.361,106.102)
O5': (101.516,110.926,108.076)
C3': (100.121,108.340,107.317)
C1': (98.062,109.123,108.223)
O4': (99.131,109.584,109.048)
C5': (101.556,109.764,108.943)
P: (101.934,112.384,108.600)
O2: (95.372,109.426,107.623)
C4': (100.353,108.868,108.722)
C2': (98.621,108.035,107.303)
O2': (98.280,106.764,107.809)
N1: (97.509,110.269,107.469)
N3: (95.626,111.398,106.524)
N4: (95.935,113.390,105.440)
C6: (98.337,111.261,107.020)
C5: (97.858,112.312,106.342)
O3': (100.923,107.190,107.031)
OP1: (101.284,113.431,107.771)
OP2: (101.786,112.429,110.080)
C4: (96.454,112.361,106.102)
O5': (101.516,110.926,108.076)
C3': (100.121,108.340,107.317)
C1': (98.062,109.123,108.223)
O4': (99.131,109.584,109.048)
C5': (101.556,109.764,108.943)
P: (101.934,112.384,108.600)
O2: (95.372,109.426,107.623)
C4': (100.353,108.868,108.722)
C2': (98.621,108.035,107.303)
O2': (98.280,106.764,107.809)
N1: (97.509,110.269,107.469)
N3: (95.626,111.398,106.524)
N4: (95.935,113.390,105.440)
C6: (98.337,111.261,107.020)
C5: (97.858,112.312,106.342)
O3': (100.923,107.190,107.031)
Image (generated by PyMOL):