Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1001:A1000
Extra
PDB:
ATOM 1 O3' C A1000 -86.685-102.414 -14.474 1.00 0.01 O
ATOM 2 P A A1001 -86.924-102.953 -12.992 1.00 0.01 P
ATOM 3 OP1 A A1001 -87.196-101.818 -12.131 1.00 0.01 O
ATOM 4 OP2 A A1001 -85.785-103.800 -12.685 1.00 0.01 O
ATOM 5 O5' A A1001 -88.218-103.819 -13.114 1.00 0.01 O
ATOM 6 C5' A A1001 -88.563-104.713 -12.078 1.00 0.01 C
ATOM 7 C4' A A1001 -90.037-104.745 -11.837 1.00 0.01 C
ATOM 8 O4' A A1001 -90.465-103.448 -11.377 1.00 0.01 O
ATOM 9 C3' A A1001 -90.888-105.077 -13.050 1.00 0.01 C
ATOM 10 O3' A A1001 -91.959-105.896 -12.645 1.00 0.01 O
ATOM 11 C2' A A1001 -91.425-103.733 -13.485 1.00 0.01 C
ATOM 12 O2' A A1001 -92.667-103.813 -14.125 1.00 0.01 O
ATOM 13 C1' A A1001 -91.540-102.999 -12.152 1.00 0.01 C
ATOM 14 N9 A A1001 -91.453-101.540 -12.252 1.00 0.01 N
ATOM 15 C8 A A1001 -90.347-100.790 -12.461 1.00 0.01 C
ATOM 16 N7 A A1001 -90.569 -99.512 -12.499 1.00 0.01 N
ATOM 17 C5 A A1001 -91.921 -99.410 -12.288 1.00 0.01 C
ATOM 18 C6 A A1001 -92.792 -98.321 -12.214 1.00 0.01 C
ATOM 19 N6 A A1001 -92.430 -97.068 -12.344 1.00 0.01 N
ATOM 20 N1 A A1001 -94.080 -98.527 -12.010 1.00 0.01 N
ATOM 21 C2 A A1001 -94.441 -99.792 -11.877 1.00 0.01 C
ATOM 22 N3 A A1001 -93.716-100.895 -11.916 1.00 0.01 N
ATOM 23 C4 A A1001 -92.452-100.642 -12.128 1.00 0.01 C
ATOM 24 P A A1002 -91.683-107.419 -12.302 1.00 0.01 P
ATOM 25 OP1 A A1002 -90.226-107.572 -12.125 1.00 0.01 O
ATOM 26 OP2 A A1002 -92.361-108.212 -13.322 1.00 0.01 O
ATOM 27 O5' A A1002 -92.402-107.627 -10.916 1.00 0.01 O
TER
ATOM 1 O3' C B 999 -90.392-105.920 -18.158 1.00 0.01 O
ATOM 2 P C B1000 -90.065-105.680 -16.632 1.00 0.01 P
ATOM 3 OP1 C B1000 -89.013-106.638 -16.287 1.00 0.01 O
ATOM 4 OP2 C B1000 -91.336-105.724 -15.885 1.00 0.01 O
ATOM 5 O5' C B1000 -89.474-104.207 -16.624 1.00 0.01 O
ATOM 6 C5' C B1000 -88.097-104.001 -16.828 1.00 0.01 C
ATOM 7 C4' C B1000 -87.704-102.561 -16.668 1.00 0.01 C
ATOM 8 O4' C B1000 -88.593-101.702 -17.416 1.00 0.01 O
ATOM 9 C3' C B1000 -87.756-101.986 -15.279 1.00 0.01 C
ATOM 10 O3' C B1000 -86.685-102.414 -14.474 1.00 0.01 O
ATOM 11 C2' C B1000 -87.736-100.486 -15.581 1.00 0.01 C
ATOM 12 O2' C B1000 -86.444-100.041 -15.942 1.00 0.01 O
ATOM 13 C1' C B1000 -88.622-100.426 -16.816 1.00 0.01 C
ATOM 14 N1 C B1000 -89.978-100.113 -16.445 1.00 0.01 N
ATOM 15 C2 C B1000 -90.158 -98.809 -16.083 1.00 0.01 C
ATOM 16 O2 C B1000 -89.149 -98.089 -16.186 1.00 0.01 O
ATOM 17 N3 C B1000 -91.393 -98.430 -15.650 1.00 0.01 N
ATOM 18 C4 C B1000 -92.384 -99.326 -15.561 1.00 0.01 C
ATOM 19 N4 C B1000 -93.602 -98.970 -15.140 1.00 0.01 N
ATOM 20 C5 C B1000 -92.167-100.676 -15.905 1.00 0.01 C
ATOM 21 C6 C B1000 -90.956-101.036 -16.320 1.00 0.01 C
ATOM 22 P A B1001 -86.924-102.953 -12.992 1.00 0.01 P
ATOM 23 OP1 A B1001 -87.196-101.818 -12.131 1.00 0.01 O
ATOM 24 OP2 A B1001 -85.785-103.800 -12.685 1.00 0.01 O
ATOM 25 O5' A B1001 -88.218-103.819 -13.114 1.00 0.01 O
TER
ATOM 2 P A A1001 -86.924-102.953 -12.992 1.00 0.01 P
ATOM 3 OP1 A A1001 -87.196-101.818 -12.131 1.00 0.01 O
ATOM 4 OP2 A A1001 -85.785-103.800 -12.685 1.00 0.01 O
ATOM 5 O5' A A1001 -88.218-103.819 -13.114 1.00 0.01 O
ATOM 6 C5' A A1001 -88.563-104.713 -12.078 1.00 0.01 C
ATOM 7 C4' A A1001 -90.037-104.745 -11.837 1.00 0.01 C
ATOM 8 O4' A A1001 -90.465-103.448 -11.377 1.00 0.01 O
ATOM 9 C3' A A1001 -90.888-105.077 -13.050 1.00 0.01 C
ATOM 10 O3' A A1001 -91.959-105.896 -12.645 1.00 0.01 O
ATOM 11 C2' A A1001 -91.425-103.733 -13.485 1.00 0.01 C
ATOM 12 O2' A A1001 -92.667-103.813 -14.125 1.00 0.01 O
ATOM 13 C1' A A1001 -91.540-102.999 -12.152 1.00 0.01 C
ATOM 14 N9 A A1001 -91.453-101.540 -12.252 1.00 0.01 N
ATOM 15 C8 A A1001 -90.347-100.790 -12.461 1.00 0.01 C
ATOM 16 N7 A A1001 -90.569 -99.512 -12.499 1.00 0.01 N
ATOM 17 C5 A A1001 -91.921 -99.410 -12.288 1.00 0.01 C
ATOM 18 C6 A A1001 -92.792 -98.321 -12.214 1.00 0.01 C
ATOM 19 N6 A A1001 -92.430 -97.068 -12.344 1.00 0.01 N
ATOM 20 N1 A A1001 -94.080 -98.527 -12.010 1.00 0.01 N
ATOM 21 C2 A A1001 -94.441 -99.792 -11.877 1.00 0.01 C
ATOM 22 N3 A A1001 -93.716-100.895 -11.916 1.00 0.01 N
ATOM 23 C4 A A1001 -92.452-100.642 -12.128 1.00 0.01 C
ATOM 24 P A A1002 -91.683-107.419 -12.302 1.00 0.01 P
ATOM 25 OP1 A A1002 -90.226-107.572 -12.125 1.00 0.01 O
ATOM 26 OP2 A A1002 -92.361-108.212 -13.322 1.00 0.01 O
ATOM 27 O5' A A1002 -92.402-107.627 -10.916 1.00 0.01 O
TER
ATOM 1 O3' C B 999 -90.392-105.920 -18.158 1.00 0.01 O
ATOM 2 P C B1000 -90.065-105.680 -16.632 1.00 0.01 P
ATOM 3 OP1 C B1000 -89.013-106.638 -16.287 1.00 0.01 O
ATOM 4 OP2 C B1000 -91.336-105.724 -15.885 1.00 0.01 O
ATOM 5 O5' C B1000 -89.474-104.207 -16.624 1.00 0.01 O
ATOM 6 C5' C B1000 -88.097-104.001 -16.828 1.00 0.01 C
ATOM 7 C4' C B1000 -87.704-102.561 -16.668 1.00 0.01 C
ATOM 8 O4' C B1000 -88.593-101.702 -17.416 1.00 0.01 O
ATOM 9 C3' C B1000 -87.756-101.986 -15.279 1.00 0.01 C
ATOM 10 O3' C B1000 -86.685-102.414 -14.474 1.00 0.01 O
ATOM 11 C2' C B1000 -87.736-100.486 -15.581 1.00 0.01 C
ATOM 12 O2' C B1000 -86.444-100.041 -15.942 1.00 0.01 O
ATOM 13 C1' C B1000 -88.622-100.426 -16.816 1.00 0.01 C
ATOM 14 N1 C B1000 -89.978-100.113 -16.445 1.00 0.01 N
ATOM 15 C2 C B1000 -90.158 -98.809 -16.083 1.00 0.01 C
ATOM 16 O2 C B1000 -89.149 -98.089 -16.186 1.00 0.01 O
ATOM 17 N3 C B1000 -91.393 -98.430 -15.650 1.00 0.01 N
ATOM 18 C4 C B1000 -92.384 -99.326 -15.561 1.00 0.01 C
ATOM 19 N4 C B1000 -93.602 -98.970 -15.140 1.00 0.01 N
ATOM 20 C5 C B1000 -92.167-100.676 -15.905 1.00 0.01 C
ATOM 21 C6 C B1000 -90.956-101.036 -16.320 1.00 0.01 C
ATOM 22 P A B1001 -86.924-102.953 -12.992 1.00 0.01 P
ATOM 23 OP1 A B1001 -87.196-101.818 -12.131 1.00 0.01 O
ATOM 24 OP2 A B1001 -85.785-103.800 -12.685 1.00 0.01 O
ATOM 25 O5' A B1001 -88.218-103.819 -13.114 1.00 0.01 O
TER
Atoms:
OP1: (-87.196,-101.818,-12.131)
OP2: (-85.785,-103.800,-12.685)
C3': (-90.888,-105.077,-13.050)
C1': (-91.540,-102.999,-12.152)
C5': (-88.563,-104.713,-12.078)
O4': (-90.465,-103.448,-11.377)
C8: (-90.347,-100.790,-12.461)
O2': (-92.667,-103.813,-14.125)
C6: (-92.792,-98.321,-12.214)
C5: (-91.921,-99.410,-12.288)
C4: (-92.452,-100.642,-12.128)
P: (-86.924,-102.953,-12.992)
C4': (-90.037,-104.745,-11.837)
C2': (-91.425,-103.733,-13.485)
C2: (-94.441,-99.792,-11.877)
N1: (-94.080,-98.527,-12.010)
N3: (-93.716,-100.895,-11.916)
N6: (-92.430,-97.068,-12.344)
N7: (-90.569,-99.512,-12.499)
N9: (-91.453,-101.540,-12.252)
O5': (-88.218,-103.819,-13.114)
O3': (-91.959,-105.896,-12.645)
OP2: (-85.785,-103.800,-12.685)
C3': (-90.888,-105.077,-13.050)
C1': (-91.540,-102.999,-12.152)
C5': (-88.563,-104.713,-12.078)
O4': (-90.465,-103.448,-11.377)
C8: (-90.347,-100.790,-12.461)
O2': (-92.667,-103.813,-14.125)
C6: (-92.792,-98.321,-12.214)
C5: (-91.921,-99.410,-12.288)
C4: (-92.452,-100.642,-12.128)
P: (-86.924,-102.953,-12.992)
C4': (-90.037,-104.745,-11.837)
C2': (-91.425,-103.733,-13.485)
C2: (-94.441,-99.792,-11.877)
N1: (-94.080,-98.527,-12.010)
N3: (-93.716,-100.895,-11.916)
N6: (-92.430,-97.068,-12.344)
N7: (-90.569,-99.512,-12.499)
N9: (-91.453,-101.540,-12.252)
O5': (-88.218,-103.819,-13.114)
O3': (-91.959,-105.896,-12.645)
C2: (-90.158,-98.809,-16.083)
OP1: (-89.013,-106.638,-16.287)
OP2: (-91.336,-105.724,-15.885)
C4: (-92.384,-99.326,-15.561)
O5': (-89.474,-104.207,-16.624)
C3': (-87.756,-101.986,-15.279)
C1': (-88.622,-100.426,-16.816)
O4': (-88.593,-101.702,-17.416)
C5': (-88.097,-104.001,-16.828)
P: (-90.065,-105.680,-16.632)
O2: (-89.149,-98.089,-16.186)
C4': (-87.704,-102.561,-16.668)
C2': (-87.736,-100.486,-15.581)
O2': (-86.444,-100.041,-15.942)
N1: (-89.978,-100.113,-16.445)
N3: (-91.393,-98.430,-15.650)
N4: (-93.602,-98.970,-15.140)
C6: (-90.956,-101.036,-16.320)
C5: (-92.167,-100.676,-15.905)
O3': (-86.685,-102.414,-14.474)
OP1: (-89.013,-106.638,-16.287)
OP2: (-91.336,-105.724,-15.885)
C4: (-92.384,-99.326,-15.561)
O5': (-89.474,-104.207,-16.624)
C3': (-87.756,-101.986,-15.279)
C1': (-88.622,-100.426,-16.816)
O4': (-88.593,-101.702,-17.416)
C5': (-88.097,-104.001,-16.828)
P: (-90.065,-105.680,-16.632)
O2: (-89.149,-98.089,-16.186)
C4': (-87.704,-102.561,-16.668)
C2': (-87.736,-100.486,-15.581)
O2': (-86.444,-100.041,-15.942)
N1: (-89.978,-100.113,-16.445)
N3: (-91.393,-98.430,-15.650)
N4: (-93.602,-98.970,-15.140)
C6: (-90.956,-101.036,-16.320)
C5: (-92.167,-100.676,-15.905)
O3': (-86.685,-102.414,-14.474)
Image (generated by PyMOL):