Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1298:A123
Extra
PDB:
ATOM 1 O3' G A1297 -21.572 -40.221 41.416 1.00 2.32 O
ATOM 2 P A A1298 -20.964 -38.803 41.882 1.00 13.28 P
ATOM 3 OP1 A A1298 -22.121 -37.979 42.334 1.00 45.86 O
ATOM 4 OP2 A A1298 -20.046 -38.293 40.841 1.00 45.85 O
ATOM 5 O5' A A1298 -20.109 -39.151 43.174 1.00 33.54 O
ATOM 6 C5' A A1298 -19.117 -40.163 43.108 1.00 33.54 C
ATOM 7 C4' A A1298 -18.325 -40.195 44.370 1.00 33.54 C
ATOM 8 O4' A A1298 -17.510 -41.384 44.360 1.00 33.54 O
ATOM 9 C3' A A1298 -17.343 -39.056 44.567 1.00 33.54 C
ATOM 10 O3' A A1298 -17.981 -37.920 45.155 1.00 33.54 O
ATOM 11 C2' A A1298 -16.326 -39.672 45.517 1.00 33.54 C
ATOM 12 O2' A A1298 -16.760 -39.592 46.857 1.00 33.54 O
ATOM 13 C1' A A1298 -16.330 -41.142 45.085 1.00 33.54 C
ATOM 14 N9 A A1298 -15.172 -41.522 44.274 1.00 33.98 N
ATOM 15 C8 A A1298 -14.086 -42.249 44.709 1.00 34.03 C
ATOM 16 N7 A A1298 -13.130 -42.361 43.818 1.00 34.16 N
ATOM 17 C5 A A1298 -13.623 -41.681 42.721 1.00 34.19 C
ATOM 18 C6 A A1298 -13.070 -41.409 41.489 1.00 34.16 C
ATOM 19 N6 A A1298 -11.830 -41.753 41.162 1.00 34.01 N
ATOM 20 N1 A A1298 -13.826 -40.739 40.598 1.00 34.07 N
ATOM 21 C2 A A1298 -15.058 -40.344 40.963 1.00 34.01 C
ATOM 22 N3 A A1298 -15.681 -40.511 42.119 1.00 33.88 N
ATOM 23 C4 A A1298 -14.899 -41.195 42.969 1.00 34.04 C
ATOM 24 P C A1299 -17.202 -36.505 45.232 1.00 13.46 P
ATOM 25 OP1 C A1299 -15.768 -36.773 45.488 1.00 13.46 O
ATOM 26 OP2 C A1299 -17.947 -35.611 46.142 1.00 13.46 O
ATOM 27 O5' C A1299 -17.302 -35.935 43.755 1.00 21.84 O
TER
ATOM 1 O3' C B 122 -17.418 -42.696 47.714 1.00 16.95 O
ATOM 2 P G B 123 -16.290 -42.599 48.859 1.00 43.62 P
ATOM 3 OP1 G B 123 -15.139 -41.839 48.304 1.00 48.95 O
ATOM 4 OP2 G B 123 -16.069 -43.956 49.431 1.00 49.05 O
ATOM 5 O5' G B 123 -17.003 -41.707 49.968 1.00 24.70 O
ATOM 6 C5' G B 123 -16.558 -41.685 51.321 1.00 24.70 C
ATOM 7 C4' G B 123 -17.460 -40.793 52.133 1.00 24.70 C
ATOM 8 O4' G B 123 -18.775 -41.402 52.246 1.00 24.70 O
ATOM 9 C3' G B 123 -17.026 -40.583 53.568 1.00 24.70 C
ATOM 10 O3' G B 123 -16.031 -39.582 53.668 1.00 24.70 O
ATOM 11 C2' G B 123 -18.335 -40.232 54.268 1.00 24.70 C
ATOM 12 O2' G B 123 -18.742 -38.886 54.096 1.00 24.70 O
ATOM 13 C1' G B 123 -19.320 -41.138 53.534 1.00 24.70 C
ATOM 14 N9 G B 123 -19.493 -42.404 54.244 1.00 33.29 N
ATOM 15 C8 G B 123 -19.154 -43.657 53.803 1.00 33.11 C
ATOM 16 N7 G B 123 -19.444 -44.596 54.658 1.00 32.97 N
ATOM 17 C5 G B 123 -20.004 -43.923 55.729 1.00 32.92 C
ATOM 18 C6 G B 123 -20.503 -44.418 56.941 1.00 33.01 C
ATOM 19 O6 G B 123 -20.551 -45.584 57.326 1.00 33.13 O
ATOM 20 N1 G B 123 -20.974 -43.399 57.754 1.00 33.10 N
ATOM 21 C2 G B 123 -20.945 -42.068 57.439 1.00 33.12 C
ATOM 22 N2 G B 123 -21.424 -41.234 58.368 1.00 33.16 N
ATOM 23 N3 G B 123 -20.476 -41.589 56.301 1.00 33.08 N
ATOM 24 C4 G B 123 -20.031 -42.570 55.497 1.00 33.03 C
ATOM 25 P G B 124 -14.807 -39.793 54.682 1.00 46.21 P
ATOM 26 OP1 G B 124 -13.595 -39.255 54.002 1.00 39.60 O
ATOM 27 OP2 G B 124 -14.816 -41.206 55.166 1.00 39.68 O
ATOM 28 O5' G B 124 -15.183 -38.858 55.917 1.00 52.41 O
TER
ATOM 2 P A A1298 -20.964 -38.803 41.882 1.00 13.28 P
ATOM 3 OP1 A A1298 -22.121 -37.979 42.334 1.00 45.86 O
ATOM 4 OP2 A A1298 -20.046 -38.293 40.841 1.00 45.85 O
ATOM 5 O5' A A1298 -20.109 -39.151 43.174 1.00 33.54 O
ATOM 6 C5' A A1298 -19.117 -40.163 43.108 1.00 33.54 C
ATOM 7 C4' A A1298 -18.325 -40.195 44.370 1.00 33.54 C
ATOM 8 O4' A A1298 -17.510 -41.384 44.360 1.00 33.54 O
ATOM 9 C3' A A1298 -17.343 -39.056 44.567 1.00 33.54 C
ATOM 10 O3' A A1298 -17.981 -37.920 45.155 1.00 33.54 O
ATOM 11 C2' A A1298 -16.326 -39.672 45.517 1.00 33.54 C
ATOM 12 O2' A A1298 -16.760 -39.592 46.857 1.00 33.54 O
ATOM 13 C1' A A1298 -16.330 -41.142 45.085 1.00 33.54 C
ATOM 14 N9 A A1298 -15.172 -41.522 44.274 1.00 33.98 N
ATOM 15 C8 A A1298 -14.086 -42.249 44.709 1.00 34.03 C
ATOM 16 N7 A A1298 -13.130 -42.361 43.818 1.00 34.16 N
ATOM 17 C5 A A1298 -13.623 -41.681 42.721 1.00 34.19 C
ATOM 18 C6 A A1298 -13.070 -41.409 41.489 1.00 34.16 C
ATOM 19 N6 A A1298 -11.830 -41.753 41.162 1.00 34.01 N
ATOM 20 N1 A A1298 -13.826 -40.739 40.598 1.00 34.07 N
ATOM 21 C2 A A1298 -15.058 -40.344 40.963 1.00 34.01 C
ATOM 22 N3 A A1298 -15.681 -40.511 42.119 1.00 33.88 N
ATOM 23 C4 A A1298 -14.899 -41.195 42.969 1.00 34.04 C
ATOM 24 P C A1299 -17.202 -36.505 45.232 1.00 13.46 P
ATOM 25 OP1 C A1299 -15.768 -36.773 45.488 1.00 13.46 O
ATOM 26 OP2 C A1299 -17.947 -35.611 46.142 1.00 13.46 O
ATOM 27 O5' C A1299 -17.302 -35.935 43.755 1.00 21.84 O
TER
ATOM 1 O3' C B 122 -17.418 -42.696 47.714 1.00 16.95 O
ATOM 2 P G B 123 -16.290 -42.599 48.859 1.00 43.62 P
ATOM 3 OP1 G B 123 -15.139 -41.839 48.304 1.00 48.95 O
ATOM 4 OP2 G B 123 -16.069 -43.956 49.431 1.00 49.05 O
ATOM 5 O5' G B 123 -17.003 -41.707 49.968 1.00 24.70 O
ATOM 6 C5' G B 123 -16.558 -41.685 51.321 1.00 24.70 C
ATOM 7 C4' G B 123 -17.460 -40.793 52.133 1.00 24.70 C
ATOM 8 O4' G B 123 -18.775 -41.402 52.246 1.00 24.70 O
ATOM 9 C3' G B 123 -17.026 -40.583 53.568 1.00 24.70 C
ATOM 10 O3' G B 123 -16.031 -39.582 53.668 1.00 24.70 O
ATOM 11 C2' G B 123 -18.335 -40.232 54.268 1.00 24.70 C
ATOM 12 O2' G B 123 -18.742 -38.886 54.096 1.00 24.70 O
ATOM 13 C1' G B 123 -19.320 -41.138 53.534 1.00 24.70 C
ATOM 14 N9 G B 123 -19.493 -42.404 54.244 1.00 33.29 N
ATOM 15 C8 G B 123 -19.154 -43.657 53.803 1.00 33.11 C
ATOM 16 N7 G B 123 -19.444 -44.596 54.658 1.00 32.97 N
ATOM 17 C5 G B 123 -20.004 -43.923 55.729 1.00 32.92 C
ATOM 18 C6 G B 123 -20.503 -44.418 56.941 1.00 33.01 C
ATOM 19 O6 G B 123 -20.551 -45.584 57.326 1.00 33.13 O
ATOM 20 N1 G B 123 -20.974 -43.399 57.754 1.00 33.10 N
ATOM 21 C2 G B 123 -20.945 -42.068 57.439 1.00 33.12 C
ATOM 22 N2 G B 123 -21.424 -41.234 58.368 1.00 33.16 N
ATOM 23 N3 G B 123 -20.476 -41.589 56.301 1.00 33.08 N
ATOM 24 C4 G B 123 -20.031 -42.570 55.497 1.00 33.03 C
ATOM 25 P G B 124 -14.807 -39.793 54.682 1.00 46.21 P
ATOM 26 OP1 G B 124 -13.595 -39.255 54.002 1.00 39.60 O
ATOM 27 OP2 G B 124 -14.816 -41.206 55.166 1.00 39.68 O
ATOM 28 O5' G B 124 -15.183 -38.858 55.917 1.00 52.41 O
TER
Atoms:
OP1: (-22.121,-37.979,42.334)
OP2: (-20.046,-38.293,40.841)
C3': (-17.343,-39.056,44.567)
C1': (-16.330,-41.142,45.085)
C5': (-19.117,-40.163,43.108)
O4': (-17.510,-41.384,44.360)
C8: (-14.086,-42.249,44.709)
O2': (-16.760,-39.592,46.857)
C6: (-13.070,-41.409,41.489)
C5: (-13.623,-41.681,42.721)
C4: (-14.899,-41.195,42.969)
P: (-20.964,-38.803,41.882)
C4': (-18.325,-40.195,44.370)
C2': (-16.326,-39.672,45.517)
C2: (-15.058,-40.344,40.963)
N1: (-13.826,-40.739,40.598)
N3: (-15.681,-40.511,42.119)
N6: (-11.830,-41.753,41.162)
N7: (-13.130,-42.361,43.818)
N9: (-15.172,-41.522,44.274)
O5': (-20.109,-39.151,43.174)
O3': (-17.981,-37.920,45.155)
OP2: (-20.046,-38.293,40.841)
C3': (-17.343,-39.056,44.567)
C1': (-16.330,-41.142,45.085)
C5': (-19.117,-40.163,43.108)
O4': (-17.510,-41.384,44.360)
C8: (-14.086,-42.249,44.709)
O2': (-16.760,-39.592,46.857)
C6: (-13.070,-41.409,41.489)
C5: (-13.623,-41.681,42.721)
C4: (-14.899,-41.195,42.969)
P: (-20.964,-38.803,41.882)
C4': (-18.325,-40.195,44.370)
C2': (-16.326,-39.672,45.517)
C2: (-15.058,-40.344,40.963)
N1: (-13.826,-40.739,40.598)
N3: (-15.681,-40.511,42.119)
N6: (-11.830,-41.753,41.162)
N7: (-13.130,-42.361,43.818)
N9: (-15.172,-41.522,44.274)
O5': (-20.109,-39.151,43.174)
O3': (-17.981,-37.920,45.155)
OP1: (-15.139,-41.839,48.304)
OP2: (-16.069,-43.956,49.431)
C3': (-17.026,-40.583,53.568)
C1': (-19.320,-41.138,53.534)
C5': (-16.558,-41.685,51.321)
O6: (-20.551,-45.584,57.326)
O4': (-18.775,-41.402,52.246)
C8: (-19.154,-43.657,53.803)
C2: (-20.945,-42.068,57.439)
C6: (-20.503,-44.418,56.941)
C5: (-20.004,-43.923,55.729)
C4: (-20.031,-42.570,55.497)
P: (-16.290,-42.599,48.859)
C4': (-17.460,-40.793,52.133)
C2': (-18.335,-40.232,54.268)
O2': (-18.742,-38.886,54.096)
N1: (-20.974,-43.399,57.754)
N2: (-21.424,-41.234,58.368)
N3: (-20.476,-41.589,56.301)
N7: (-19.444,-44.596,54.658)
N9: (-19.493,-42.404,54.244)
O5': (-17.003,-41.707,49.968)
O3': (-16.031,-39.582,53.668)
OP2: (-16.069,-43.956,49.431)
C3': (-17.026,-40.583,53.568)
C1': (-19.320,-41.138,53.534)
C5': (-16.558,-41.685,51.321)
O6: (-20.551,-45.584,57.326)
O4': (-18.775,-41.402,52.246)
C8: (-19.154,-43.657,53.803)
C2: (-20.945,-42.068,57.439)
C6: (-20.503,-44.418,56.941)
C5: (-20.004,-43.923,55.729)
C4: (-20.031,-42.570,55.497)
P: (-16.290,-42.599,48.859)
C4': (-17.460,-40.793,52.133)
C2': (-18.335,-40.232,54.268)
O2': (-18.742,-38.886,54.096)
N1: (-20.974,-43.399,57.754)
N2: (-21.424,-41.234,58.368)
N3: (-20.476,-41.589,56.301)
N7: (-19.444,-44.596,54.658)
N9: (-19.493,-42.404,54.244)
O5': (-17.003,-41.707,49.968)
O3': (-16.031,-39.582,53.668)
Image (generated by PyMOL):