ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02407:02538

Extra

PDB:
ATOM 1 O3' C A2406 74.532 115.020 161.228 1.00 63.03 O
ATOM 2 P A A2407 75.519 114.517 162.398 1.00 61.51 P
ATOM 3 OP1 A A2407 76.895 114.846 161.940 1.00 60.59 O
ATOM 4 OP2 A A2407 75.190 113.120 162.798 1.00 59.85 O
ATOM 5 O5' A A2407 75.202 115.486 163.620 1.00 61.61 O
ATOM 6 C5' A A2407 74.023 115.323 164.425 1.00 60.61 C
ATOM 7 C4' A A2407 73.930 116.458 165.412 1.00 60.74 C
ATOM 8 O4' A A2407 75.131 116.454 166.229 1.00 59.28 O
ATOM 9 C3' A A2407 73.921 117.844 164.784 1.00 60.73 C
ATOM 10 O3' A A2407 72.614 118.229 164.358 1.00 62.48 O
ATOM 11 C2' A A2407 74.472 118.713 165.907 1.00 59.40 C
ATOM 12 O2' A A2407 73.518 118.999 166.911 1.00 59.17 O
ATOM 13 C1' A A2407 75.539 117.789 166.495 1.00 58.20 C
ATOM 14 N9 A A2407 76.877 117.986 165.928 1.00 57.16 N
ATOM 15 C8 A A2407 77.646 117.085 165.224 1.00 56.12 C
ATOM 16 N7 A A2407 78.818 117.554 164.870 1.00 55.00 N
ATOM 17 C5 A A2407 78.825 118.849 165.369 1.00 53.80 C
ATOM 18 C6 A A2407 79.786 119.873 165.332 1.00 53.46 C
ATOM 19 N6 A A2407 80.993 119.744 164.774 1.00 52.84 N
ATOM 20 N1 A A2407 79.468 121.051 165.905 1.00 53.89 N
ATOM 21 C2 A A2407 78.272 121.177 166.489 1.00 53.93 C
ATOM 22 N3 A A2407 77.292 120.287 166.605 1.00 53.93 N
ATOM 23 C4 A A2407 77.634 119.131 166.015 1.00 54.90 C
ATOM 24 P G A2408 72.429 119.035 162.977 1.00 62.06 P
ATOM 25 OP1 G A2408 70.982 119.347 162.811 1.00 61.22 O
ATOM 26 OP2 G A2408 73.145 118.280 161.918 1.00 62.65 O
ATOM 27 O5' G A2408 73.221 120.398 163.212 1.00 61.63 O
TER

ATOM 1 O3' G B2537 87.614 126.291 170.194 1.00 82.32 O
ATOM 2 P A B2538 87.146 127.470 169.199 1.00 84.80 P
ATOM 3 OP1 A B2538 88.043 128.625 169.460 1.00 85.18 O
ATOM 4 OP2 A B2538 85.675 127.654 169.300 1.00 84.22 O
ATOM 5 O5' A B2538 87.493 126.921 167.745 1.00 83.84 O
ATOM 6 C5' A B2538 88.856 126.864 167.277 1.00 82.94 C
ATOM 7 C4' A B2538 88.915 126.181 165.931 1.00 82.55 C
ATOM 8 O4' A B2538 88.437 124.814 166.070 1.00 81.81 O
ATOM 9 C3' A B2538 88.015 126.788 164.865 1.00 82.43 C
ATOM 10 O3' A B2538 88.630 127.883 164.199 1.00 82.69 O
ATOM 11 C2' A B2538 87.782 125.610 163.935 1.00 81.83 C
ATOM 12 O2' A B2538 88.892 125.382 163.092 1.00 81.91 O
ATOM 13 C1' A B2538 87.650 124.464 164.943 1.00 80.72 C
ATOM 14 N9 A B2538 86.272 124.264 165.401 1.00 79.23 N
ATOM 15 C8 A B2538 85.577 125.018 166.319 1.00 78.84 C
ATOM 16 N7 A B2538 84.354 124.601 166.529 1.00 78.31 N
ATOM 17 C5 A B2538 84.231 123.499 165.695 1.00 78.01 C
ATOM 18 C6 A B2538 83.170 122.616 165.455 1.00 77.70 C
ATOM 19 N6 A B2538 81.983 122.711 166.055 1.00 77.29 N
ATOM 20 N1 A B2538 83.369 121.619 164.564 1.00 78.04 N
ATOM 21 C2 A B2538 84.563 121.528 163.961 1.00 78.24 C
ATOM 22 N3 A B2538 85.639 122.299 164.103 1.00 78.54 N
ATOM 23 C4 A B2538 85.405 123.278 164.995 1.00 78.63 C
ATOM 24 P G B2539 87.832 129.272 164.040 1.00 84.27 P
ATOM 25 OP1 G B2539 88.646 130.111 163.118 1.00 83.10 O
ATOM 26 OP2 G B2539 87.491 129.782 165.396 1.00 82.63 O
ATOM 27 O5' G B2539 86.467 128.880 163.310 1.00 83.81 O
TER

Atoms:
OP1: (76.895,114.846,161.940)
OP2: (75.190,113.120,162.798)
C3': (73.921,117.844,164.784)
C1': (75.539,117.789,166.495)
C5': (74.023,115.323,164.425)
O4': (75.131,116.454,166.229)
C8: (77.646,117.085,165.224)
O2': (73.518,118.999,166.911)
C6: (79.786,119.873,165.332)
C5: (78.825,118.849,165.369)
C4: (77.634,119.131,166.015)
P: (75.519,114.517,162.398)
C4': (73.930,116.458,165.412)
C2': (74.472,118.713,165.907)
C2: (78.272,121.177,166.489)
N1: (79.468,121.051,165.905)
N3: (77.292,120.287,166.605)
N6: (80.993,119.744,164.774)
N7: (78.818,117.554,164.870)
N9: (76.877,117.986,165.928)
O5': (75.202,115.486,163.620)
O3': (72.614,118.229,164.358)
OP1: (88.043,128.625,169.460)
OP2: (85.675,127.654,169.300)
C3': (88.015,126.788,164.865)
C1': (87.650,124.464,164.943)
C5': (88.856,126.864,167.277)
O4': (88.437,124.814,166.070)
C8: (85.577,125.018,166.319)
O2': (88.892,125.382,163.092)
C6: (83.170,122.616,165.455)
C5: (84.231,123.499,165.695)
C4: (85.405,123.278,164.995)
P: (87.146,127.470,169.199)
C4': (88.915,126.181,165.931)
C2': (87.782,125.610,163.935)
C2: (84.563,121.528,163.961)
N1: (83.369,121.619,164.564)
N3: (85.639,122.299,164.103)
N6: (81.983,122.711,166.055)
N7: (84.354,124.601,166.529)
N9: (86.272,124.264,165.401)
O5': (87.493,126.921,167.745)
O3': (88.630,127.883,164.199)
Image (generated by PyMOL):
PyMOL image
show in jmol