Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0345:0344
Extra
PDB:
ATOM 1 O3' C A 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 2 P A A 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 3 OP1 A A 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 4 OP2 A A 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 5 O5' A A 345 54.807 121.587 13.479 1.00 70.00 O
ATOM 6 C5' A A 345 55.992 121.658 12.691 1.00 72.09 C
ATOM 7 C4' A A 345 56.060 122.993 12.012 1.00 74.31 C
ATOM 8 O4' A A 345 55.032 123.051 10.985 1.00 75.94 O
ATOM 9 C3' A A 345 55.813 124.179 12.935 1.00 75.28 C
ATOM 10 O3' A A 345 56.639 125.255 12.526 1.00 77.35 O
ATOM 11 C2' A A 345 54.332 124.477 12.710 1.00 75.65 C
ATOM 12 O2' A A 345 53.976 125.821 12.962 1.00 75.50 O
ATOM 13 C1' A A 345 54.179 124.149 11.227 1.00 76.32 C
ATOM 14 N9 A A 345 52.817 123.773 10.843 1.00 77.47 N
ATOM 15 C8 A A 345 52.110 122.648 11.199 1.00 77.39 C
ATOM 16 N7 A A 345 50.892 122.612 10.712 1.00 78.03 N
ATOM 17 C5 A A 345 50.786 123.789 9.982 1.00 78.46 C
ATOM 18 C6 A A 345 49.730 124.352 9.229 1.00 78.01 C
ATOM 19 N6 A A 345 48.532 123.778 9.084 1.00 77.46 N
ATOM 20 N1 A A 345 49.952 125.543 8.626 1.00 78.05 N
ATOM 21 C2 A A 345 51.153 126.123 8.771 1.00 78.89 C
ATOM 22 N3 A A 345 52.222 125.696 9.452 1.00 79.52 N
ATOM 23 C4 A A 345 51.969 124.511 10.044 1.00 79.01 C
ATOM 24 P G A 346 58.080 125.447 13.208 1.00 78.69 P
ATOM 25 OP1 G A 346 58.382 124.223 13.986 1.00 78.28 O
ATOM 26 OP2 G A 346 58.082 126.766 13.882 1.00 78.92 O
ATOM 27 O5' G A 346 59.099 125.477 11.982 1.00 79.71 O
TER
ATOM 1 O3' C B 343 53.452 126.348 17.903 1.00 63.93 O
ATOM 2 P C B 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 3 OP1 C B 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 4 OP2 C B 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 5 O5' C B 344 53.334 124.411 16.277 1.00 64.38 O
ATOM 6 C5' C B 344 53.139 123.275 17.141 1.00 65.52 C
ATOM 7 C4' C B 344 52.134 122.320 16.542 1.00 65.16 C
ATOM 8 O4' C B 344 50.868 123.000 16.350 1.00 65.12 O
ATOM 9 C3' C B 344 52.493 121.773 15.174 1.00 66.03 C
ATOM 10 O3' C B 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 11 C2' C B 344 51.126 121.411 14.603 1.00 66.18 C
ATOM 12 O2' C B 344 50.631 120.184 15.095 1.00 66.91 O
ATOM 13 C1' C B 344 50.253 122.538 15.163 1.00 66.23 C
ATOM 14 N1 C B 344 50.077 123.687 14.258 1.00 67.46 N
ATOM 15 C2 C B 344 48.986 123.700 13.372 1.00 68.12 C
ATOM 16 O2 C B 344 48.198 122.738 13.360 1.00 68.67 O
ATOM 17 N3 C B 344 48.819 124.763 12.552 1.00 68.45 N
ATOM 18 C4 C B 344 49.682 125.783 12.595 1.00 68.59 C
ATOM 19 N4 C B 344 49.472 126.819 11.777 1.00 69.26 N
ATOM 20 C5 C B 344 50.798 125.791 13.478 1.00 68.18 C
ATOM 21 C6 C B 344 50.957 124.734 14.282 1.00 67.83 C
ATOM 22 P A B 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 23 OP1 A B 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 24 OP2 A B 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 25 O5' A B 345 54.807 121.587 13.479 1.00 70.00 O
TER
ATOM 2 P A A 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 3 OP1 A A 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 4 OP2 A A 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 5 O5' A A 345 54.807 121.587 13.479 1.00 70.00 O
ATOM 6 C5' A A 345 55.992 121.658 12.691 1.00 72.09 C
ATOM 7 C4' A A 345 56.060 122.993 12.012 1.00 74.31 C
ATOM 8 O4' A A 345 55.032 123.051 10.985 1.00 75.94 O
ATOM 9 C3' A A 345 55.813 124.179 12.935 1.00 75.28 C
ATOM 10 O3' A A 345 56.639 125.255 12.526 1.00 77.35 O
ATOM 11 C2' A A 345 54.332 124.477 12.710 1.00 75.65 C
ATOM 12 O2' A A 345 53.976 125.821 12.962 1.00 75.50 O
ATOM 13 C1' A A 345 54.179 124.149 11.227 1.00 76.32 C
ATOM 14 N9 A A 345 52.817 123.773 10.843 1.00 77.47 N
ATOM 15 C8 A A 345 52.110 122.648 11.199 1.00 77.39 C
ATOM 16 N7 A A 345 50.892 122.612 10.712 1.00 78.03 N
ATOM 17 C5 A A 345 50.786 123.789 9.982 1.00 78.46 C
ATOM 18 C6 A A 345 49.730 124.352 9.229 1.00 78.01 C
ATOM 19 N6 A A 345 48.532 123.778 9.084 1.00 77.46 N
ATOM 20 N1 A A 345 49.952 125.543 8.626 1.00 78.05 N
ATOM 21 C2 A A 345 51.153 126.123 8.771 1.00 78.89 C
ATOM 22 N3 A A 345 52.222 125.696 9.452 1.00 79.52 N
ATOM 23 C4 A A 345 51.969 124.511 10.044 1.00 79.01 C
ATOM 24 P G A 346 58.080 125.447 13.208 1.00 78.69 P
ATOM 25 OP1 G A 346 58.382 124.223 13.986 1.00 78.28 O
ATOM 26 OP2 G A 346 58.082 126.766 13.882 1.00 78.92 O
ATOM 27 O5' G A 346 59.099 125.477 11.982 1.00 79.71 O
TER
ATOM 1 O3' C B 343 53.452 126.348 17.903 1.00 63.93 O
ATOM 2 P C B 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 3 OP1 C B 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 4 OP2 C B 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 5 O5' C B 344 53.334 124.411 16.277 1.00 64.38 O
ATOM 6 C5' C B 344 53.139 123.275 17.141 1.00 65.52 C
ATOM 7 C4' C B 344 52.134 122.320 16.542 1.00 65.16 C
ATOM 8 O4' C B 344 50.868 123.000 16.350 1.00 65.12 O
ATOM 9 C3' C B 344 52.493 121.773 15.174 1.00 66.03 C
ATOM 10 O3' C B 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 11 C2' C B 344 51.126 121.411 14.603 1.00 66.18 C
ATOM 12 O2' C B 344 50.631 120.184 15.095 1.00 66.91 O
ATOM 13 C1' C B 344 50.253 122.538 15.163 1.00 66.23 C
ATOM 14 N1 C B 344 50.077 123.687 14.258 1.00 67.46 N
ATOM 15 C2 C B 344 48.986 123.700 13.372 1.00 68.12 C
ATOM 16 O2 C B 344 48.198 122.738 13.360 1.00 68.67 O
ATOM 17 N3 C B 344 48.819 124.763 12.552 1.00 68.45 N
ATOM 18 C4 C B 344 49.682 125.783 12.595 1.00 68.59 C
ATOM 19 N4 C B 344 49.472 126.819 11.777 1.00 69.26 N
ATOM 20 C5 C B 344 50.798 125.791 13.478 1.00 68.18 C
ATOM 21 C6 C B 344 50.957 124.734 14.282 1.00 67.83 C
ATOM 22 P A B 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 23 OP1 A B 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 24 OP2 A B 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 25 O5' A B 345 54.807 121.587 13.479 1.00 70.00 O
TER
Atoms:
OP1: (53.533,119.497,13.103)
OP2: (55.548,119.560,14.700)
C3': (55.813,124.179,12.935)
C1': (54.179,124.149,11.227)
C5': (55.992,121.658,12.691)
O4': (55.032,123.051,10.985)
C8: (52.110,122.648,11.199)
O2': (53.976,125.821,12.962)
C6: (49.730,124.352,9.229)
C5: (50.786,123.789,9.982)
C4: (51.969,124.511,10.044)
P: (54.344,120.214,14.123)
C4': (56.060,122.993,12.012)
C2': (54.332,124.477,12.710)
C2: (51.153,126.123,8.771)
N1: (49.952,125.543,8.626)
N3: (52.222,125.696,9.452)
N6: (48.532,123.778,9.084)
N7: (50.892,122.612,10.712)
N9: (52.817,123.773,10.843)
O5': (54.807,121.587,13.479)
O3': (56.639,125.255,12.526)
OP2: (55.548,119.560,14.700)
C3': (55.813,124.179,12.935)
C1': (54.179,124.149,11.227)
C5': (55.992,121.658,12.691)
O4': (55.032,123.051,10.985)
C8: (52.110,122.648,11.199)
O2': (53.976,125.821,12.962)
C6: (49.730,124.352,9.229)
C5: (50.786,123.789,9.982)
C4: (51.969,124.511,10.044)
P: (54.344,120.214,14.123)
C4': (56.060,122.993,12.012)
C2': (54.332,124.477,12.710)
C2: (51.153,126.123,8.771)
N1: (49.952,125.543,8.626)
N3: (52.222,125.696,9.452)
N6: (48.532,123.778,9.084)
N7: (50.892,122.612,10.712)
N9: (52.817,123.773,10.843)
O5': (54.807,121.587,13.479)
O3': (56.639,125.255,12.526)
C2: (48.986,123.700,13.372)
OP1: (55.508,125.051,17.312)
OP2: (54.360,126.581,15.604)
C4: (49.682,125.783,12.595)
O5': (53.334,124.411,16.277)
C3': (52.493,121.773,15.174)
C1': (50.253,122.538,15.163)
O4': (50.868,123.000,16.350)
C5': (53.139,123.275,17.141)
P: (54.266,125.623,16.724)
O2: (48.198,122.738,13.360)
C4': (52.134,122.320,16.542)
C2': (51.126,121.411,14.603)
O2': (50.631,120.184,15.095)
N1: (50.077,123.687,14.258)
N3: (48.819,124.763,12.552)
N4: (49.472,126.819,11.777)
C6: (50.957,124.734,14.282)
C5: (50.798,125.791,13.478)
O3': (53.363,120.649,15.324)
OP1: (55.508,125.051,17.312)
OP2: (54.360,126.581,15.604)
C4: (49.682,125.783,12.595)
O5': (53.334,124.411,16.277)
C3': (52.493,121.773,15.174)
C1': (50.253,122.538,15.163)
O4': (50.868,123.000,16.350)
C5': (53.139,123.275,17.141)
P: (54.266,125.623,16.724)
O2: (48.198,122.738,13.360)
C4': (52.134,122.320,16.542)
C2': (51.126,121.411,14.603)
O2': (50.631,120.184,15.095)
N1: (50.077,123.687,14.258)
N3: (48.819,124.763,12.552)
N4: (49.472,126.819,11.777)
C6: (50.957,124.734,14.282)
C5: (50.798,125.791,13.478)
O3': (53.363,120.649,15.324)
Image (generated by PyMOL):