Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2407:A2406
Extra
PDB:
ATOM 1 O3' G A2406 -115.618 -45.958 -44.168 1.00 41.26 O
ATOM 2 P A A2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 3 OP1 A A2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 4 OP2 A A2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 5 O5' A A2407 -114.467 -48.139 -44.622 1.00 60.10 O
ATOM 6 C5' A A2407 -114.619 -48.062 -46.050 1.00 60.10 C
ATOM 7 C4' A A2407 -113.430 -48.698 -46.729 1.00 60.10 C
ATOM 8 O4' A A2407 -113.351 -50.098 -46.359 1.00 60.10 O
ATOM 9 C3' A A2407 -113.463 -48.694 -48.249 1.00 60.10 C
ATOM 10 O3' A A2407 -112.921 -47.478 -48.760 1.00 60.10 O
ATOM 11 C2' A A2407 -112.590 -49.893 -48.612 1.00 60.10 C
ATOM 12 O2' A A2407 -111.210 -49.588 -48.650 1.00 60.10 O
ATOM 13 C1' A A2407 -112.872 -50.855 -47.456 1.00 60.10 C
ATOM 14 N9 A A2407 -113.862 -51.884 -47.779 1.00 49.57 N
ATOM 15 C8 A A2407 -115.202 -51.898 -47.483 1.00 49.49 C
ATOM 16 N7 A A2407 -115.819 -52.984 -47.877 1.00 49.45 N
ATOM 17 C5 A A2407 -114.820 -53.733 -48.477 1.00 49.50 C
ATOM 18 C6 A A2407 -114.826 -55.003 -49.080 1.00 49.54 C
ATOM 19 N6 A A2407 -115.910 -55.775 -49.170 1.00 49.52 N
ATOM 20 N1 A A2407 -113.662 -55.463 -49.586 1.00 49.54 N
ATOM 21 C2 A A2407 -112.571 -54.691 -49.481 1.00 49.52 C
ATOM 22 N3 A A2407 -112.440 -53.483 -48.928 1.00 49.47 N
ATOM 23 C4 A A2407 -113.614 -53.060 -48.438 1.00 49.51 C
ATOM 24 P A A2408 -113.674 -46.696 -49.949 1.00 74.53 P
ATOM 25 OP1 A A2408 -112.690 -45.695 -50.456 1.00 60.87 O
ATOM 26 OP2 A A2408 -115.004 -46.241 -49.477 1.00 60.92 O
ATOM 27 O5' A A2408 -113.921 -47.818 -51.057 1.00 54.70 O
TER
ATOM 1 O3' U B2405 -118.292 -50.145 -44.384 1.00 36.72 O
ATOM 2 P G B2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 3 OP1 G B2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 4 OP2 G B2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 5 O5' G B2406 -118.871 -48.055 -45.631 1.00 41.26 O
ATOM 6 C5' G B2406 -118.030 -46.964 -46.094 1.00 41.26 C
ATOM 7 C4' G B2406 -117.834 -45.956 -44.987 1.00 41.26 C
ATOM 8 O4' G B2406 -119.114 -45.718 -44.357 1.00 41.26 O
ATOM 9 C3' G B2406 -116.922 -46.436 -43.879 1.00 41.26 C
ATOM 10 O3' G B2406 -115.618 -45.958 -44.168 1.00 41.26 O
ATOM 11 C2' G B2406 -117.472 -45.746 -42.640 1.00 41.26 C
ATOM 12 O2' G B2406 -116.966 -44.436 -42.526 1.00 41.26 O
ATOM 13 C1' G B2406 -118.966 -45.655 -42.956 1.00 41.26 C
ATOM 14 N9 G B2406 -119.831 -46.682 -42.382 1.00 45.99 N
ATOM 15 C8 G B2406 -119.721 -48.045 -42.532 1.00 46.04 C
ATOM 16 N7 G B2406 -120.703 -48.703 -41.975 1.00 46.06 N
ATOM 17 C5 G B2406 -121.501 -47.718 -41.405 1.00 46.06 C
ATOM 18 C6 G B2406 -122.730 -47.820 -40.683 1.00 46.08 C
ATOM 19 O6 G B2406 -123.386 -48.828 -40.407 1.00 46.06 O
ATOM 20 N1 G B2406 -123.191 -46.575 -40.283 1.00 46.07 N
ATOM 21 C2 G B2406 -122.570 -45.382 -40.544 1.00 46.03 C
ATOM 22 N2 G B2406 -123.180 -44.297 -40.067 1.00 46.04 N
ATOM 23 N3 G B2406 -121.435 -45.265 -41.224 1.00 46.00 N
ATOM 24 C4 G B2406 -120.962 -46.466 -41.623 1.00 46.01 C
ATOM 25 P A B2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 26 OP1 A B2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 27 OP2 A B2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 28 O5' A B2407 -114.467 -48.139 -44.622 1.00 60.10 O
TER
ATOM 2 P A A2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 3 OP1 A A2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 4 OP2 A A2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 5 O5' A A2407 -114.467 -48.139 -44.622 1.00 60.10 O
ATOM 6 C5' A A2407 -114.619 -48.062 -46.050 1.00 60.10 C
ATOM 7 C4' A A2407 -113.430 -48.698 -46.729 1.00 60.10 C
ATOM 8 O4' A A2407 -113.351 -50.098 -46.359 1.00 60.10 O
ATOM 9 C3' A A2407 -113.463 -48.694 -48.249 1.00 60.10 C
ATOM 10 O3' A A2407 -112.921 -47.478 -48.760 1.00 60.10 O
ATOM 11 C2' A A2407 -112.590 -49.893 -48.612 1.00 60.10 C
ATOM 12 O2' A A2407 -111.210 -49.588 -48.650 1.00 60.10 O
ATOM 13 C1' A A2407 -112.872 -50.855 -47.456 1.00 60.10 C
ATOM 14 N9 A A2407 -113.862 -51.884 -47.779 1.00 49.57 N
ATOM 15 C8 A A2407 -115.202 -51.898 -47.483 1.00 49.49 C
ATOM 16 N7 A A2407 -115.819 -52.984 -47.877 1.00 49.45 N
ATOM 17 C5 A A2407 -114.820 -53.733 -48.477 1.00 49.50 C
ATOM 18 C6 A A2407 -114.826 -55.003 -49.080 1.00 49.54 C
ATOM 19 N6 A A2407 -115.910 -55.775 -49.170 1.00 49.52 N
ATOM 20 N1 A A2407 -113.662 -55.463 -49.586 1.00 49.54 N
ATOM 21 C2 A A2407 -112.571 -54.691 -49.481 1.00 49.52 C
ATOM 22 N3 A A2407 -112.440 -53.483 -48.928 1.00 49.47 N
ATOM 23 C4 A A2407 -113.614 -53.060 -48.438 1.00 49.51 C
ATOM 24 P A A2408 -113.674 -46.696 -49.949 1.00 74.53 P
ATOM 25 OP1 A A2408 -112.690 -45.695 -50.456 1.00 60.87 O
ATOM 26 OP2 A A2408 -115.004 -46.241 -49.477 1.00 60.92 O
ATOM 27 O5' A A2408 -113.921 -47.818 -51.057 1.00 54.70 O
TER
ATOM 1 O3' U B2405 -118.292 -50.145 -44.384 1.00 36.72 O
ATOM 2 P G B2406 -118.475 -49.580 -45.873 1.00 38.88 P
ATOM 3 OP1 G B2406 -119.650 -50.322 -46.418 1.00 29.56 O
ATOM 4 OP2 G B2406 -117.168 -49.606 -46.605 1.00 29.58 O
ATOM 5 O5' G B2406 -118.871 -48.055 -45.631 1.00 41.26 O
ATOM 6 C5' G B2406 -118.030 -46.964 -46.094 1.00 41.26 C
ATOM 7 C4' G B2406 -117.834 -45.956 -44.987 1.00 41.26 C
ATOM 8 O4' G B2406 -119.114 -45.718 -44.357 1.00 41.26 O
ATOM 9 C3' G B2406 -116.922 -46.436 -43.879 1.00 41.26 C
ATOM 10 O3' G B2406 -115.618 -45.958 -44.168 1.00 41.26 O
ATOM 11 C2' G B2406 -117.472 -45.746 -42.640 1.00 41.26 C
ATOM 12 O2' G B2406 -116.966 -44.436 -42.526 1.00 41.26 O
ATOM 13 C1' G B2406 -118.966 -45.655 -42.956 1.00 41.26 C
ATOM 14 N9 G B2406 -119.831 -46.682 -42.382 1.00 45.99 N
ATOM 15 C8 G B2406 -119.721 -48.045 -42.532 1.00 46.04 C
ATOM 16 N7 G B2406 -120.703 -48.703 -41.975 1.00 46.06 N
ATOM 17 C5 G B2406 -121.501 -47.718 -41.405 1.00 46.06 C
ATOM 18 C6 G B2406 -122.730 -47.820 -40.683 1.00 46.08 C
ATOM 19 O6 G B2406 -123.386 -48.828 -40.407 1.00 46.06 O
ATOM 20 N1 G B2406 -123.191 -46.575 -40.283 1.00 46.07 N
ATOM 21 C2 G B2406 -122.570 -45.382 -40.544 1.00 46.03 C
ATOM 22 N2 G B2406 -123.180 -44.297 -40.067 1.00 46.04 N
ATOM 23 N3 G B2406 -121.435 -45.265 -41.224 1.00 46.00 N
ATOM 24 C4 G B2406 -120.962 -46.466 -41.623 1.00 46.01 C
ATOM 25 P A B2407 -114.337 -46.817 -43.739 1.00 43.04 P
ATOM 26 OP1 A B2407 -114.504 -47.163 -42.299 1.00 42.96 O
ATOM 27 OP2 A B2407 -113.120 -46.083 -44.183 1.00 43.07 O
ATOM 28 O5' A B2407 -114.467 -48.139 -44.622 1.00 60.10 O
TER
Atoms:
OP1: (-114.504,-47.163,-42.299)
OP2: (-113.120,-46.083,-44.183)
C3': (-113.463,-48.694,-48.249)
C1': (-112.872,-50.855,-47.456)
C5': (-114.619,-48.062,-46.050)
O4': (-113.351,-50.098,-46.359)
C8: (-115.202,-51.898,-47.483)
O2': (-111.210,-49.588,-48.650)
C6: (-114.826,-55.003,-49.080)
C5: (-114.820,-53.733,-48.477)
C4: (-113.614,-53.060,-48.438)
P: (-114.337,-46.817,-43.739)
C4': (-113.430,-48.698,-46.729)
C2': (-112.590,-49.893,-48.612)
C2: (-112.571,-54.691,-49.481)
N1: (-113.662,-55.463,-49.586)
N3: (-112.440,-53.483,-48.928)
N6: (-115.910,-55.775,-49.170)
N7: (-115.819,-52.984,-47.877)
N9: (-113.862,-51.884,-47.779)
O5': (-114.467,-48.139,-44.622)
O3': (-112.921,-47.478,-48.760)
OP2: (-113.120,-46.083,-44.183)
C3': (-113.463,-48.694,-48.249)
C1': (-112.872,-50.855,-47.456)
C5': (-114.619,-48.062,-46.050)
O4': (-113.351,-50.098,-46.359)
C8: (-115.202,-51.898,-47.483)
O2': (-111.210,-49.588,-48.650)
C6: (-114.826,-55.003,-49.080)
C5: (-114.820,-53.733,-48.477)
C4: (-113.614,-53.060,-48.438)
P: (-114.337,-46.817,-43.739)
C4': (-113.430,-48.698,-46.729)
C2': (-112.590,-49.893,-48.612)
C2: (-112.571,-54.691,-49.481)
N1: (-113.662,-55.463,-49.586)
N3: (-112.440,-53.483,-48.928)
N6: (-115.910,-55.775,-49.170)
N7: (-115.819,-52.984,-47.877)
N9: (-113.862,-51.884,-47.779)
O5': (-114.467,-48.139,-44.622)
O3': (-112.921,-47.478,-48.760)
OP1: (-119.650,-50.322,-46.418)
OP2: (-117.168,-49.606,-46.605)
C3': (-116.922,-46.436,-43.879)
C1': (-118.966,-45.655,-42.956)
C5': (-118.030,-46.964,-46.094)
O6: (-123.386,-48.828,-40.407)
O4': (-119.114,-45.718,-44.357)
C8: (-119.721,-48.045,-42.532)
C2: (-122.570,-45.382,-40.544)
C6: (-122.730,-47.820,-40.683)
C5: (-121.501,-47.718,-41.405)
C4: (-120.962,-46.466,-41.623)
P: (-118.475,-49.580,-45.873)
C4': (-117.834,-45.956,-44.987)
C2': (-117.472,-45.746,-42.640)
O2': (-116.966,-44.436,-42.526)
N1: (-123.191,-46.575,-40.283)
N2: (-123.180,-44.297,-40.067)
N3: (-121.435,-45.265,-41.224)
N7: (-120.703,-48.703,-41.975)
N9: (-119.831,-46.682,-42.382)
O5': (-118.871,-48.055,-45.631)
O3': (-115.618,-45.958,-44.168)
OP2: (-117.168,-49.606,-46.605)
C3': (-116.922,-46.436,-43.879)
C1': (-118.966,-45.655,-42.956)
C5': (-118.030,-46.964,-46.094)
O6: (-123.386,-48.828,-40.407)
O4': (-119.114,-45.718,-44.357)
C8: (-119.721,-48.045,-42.532)
C2: (-122.570,-45.382,-40.544)
C6: (-122.730,-47.820,-40.683)
C5: (-121.501,-47.718,-41.405)
C4: (-120.962,-46.466,-41.623)
P: (-118.475,-49.580,-45.873)
C4': (-117.834,-45.956,-44.987)
C2': (-117.472,-45.746,-42.640)
O2': (-116.966,-44.436,-42.526)
N1: (-123.191,-46.575,-40.283)
N2: (-123.180,-44.297,-40.067)
N3: (-121.435,-45.265,-41.224)
N7: (-120.703,-48.703,-41.975)
N9: (-119.831,-46.682,-42.382)
O5': (-118.871,-48.055,-45.631)
O3': (-115.618,-45.958,-44.168)
Image (generated by PyMOL):