Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0192:0424
Extra
PDB:
ATOM 1 O3' G A 191 64.482 97.773 16.348 1.00 49.07 O
ATOM 2 P A A 192 64.142 99.337 16.231 1.00 48.02 P
ATOM 3 OP1 A A 192 62.772 99.580 16.759 1.00 47.53 O
ATOM 4 OP2 A A 192 64.491 99.799 14.862 1.00 49.81 O
ATOM 5 O5' A A 192 65.186 99.984 17.237 1.00 47.46 O
ATOM 6 C5' A A 192 66.593 99.681 17.137 1.00 42.69 C
ATOM 7 C4' A A 192 67.406 100.914 17.452 1.00 40.17 C
ATOM 8 O4' A A 192 67.161 101.930 16.440 1.00 38.48 O
ATOM 9 C3' A A 192 67.014 101.608 18.741 1.00 38.51 C
ATOM 10 O3' A A 192 67.564 100.976 19.881 1.00 39.04 O
ATOM 11 C2' A A 192 67.533 103.014 18.509 1.00 37.56 C
ATOM 12 O2' A A 192 68.934 103.101 18.662 1.00 37.84 O
ATOM 13 C1' A A 192 67.156 103.213 17.042 1.00 37.26 C
ATOM 14 N9 A A 192 65.810 103.765 16.920 1.00 35.50 N
ATOM 15 C8 A A 192 64.676 103.162 16.434 1.00 34.15 C
ATOM 16 N7 A A 192 63.607 103.921 16.495 1.00 36.17 N
ATOM 17 C5 A A 192 64.069 105.107 17.053 1.00 34.73 C
ATOM 18 C6 A A 192 63.422 106.313 17.398 1.00 34.82 C
ATOM 19 N6 A A 192 62.117 106.538 17.230 1.00 34.59 N
ATOM 20 N1 A A 192 64.176 107.292 17.938 1.00 35.41 N
ATOM 21 C2 A A 192 65.489 107.067 18.121 1.00 36.35 C
ATOM 22 N3 A A 192 66.206 105.980 17.845 1.00 32.93 N
ATOM 23 C4 A A 192 65.427 105.027 17.309 1.00 34.99 C
ATOM 24 P U A 193 66.726 100.956 21.252 1.00 37.77 P
ATOM 25 OP1 U A 193 67.633 100.329 22.254 1.00 36.34 O
ATOM 26 OP2 U A 193 65.374 100.395 21.027 1.00 37.52 O
ATOM 27 O5' U A 193 66.519 102.499 21.583 1.00 39.22 O
TER
ATOM 1 O3' A B 423 60.706 117.616 16.538 1.00 43.72 O
ATOM 2 P A B 424 59.953 117.510 17.943 1.00 44.26 P
ATOM 3 OP1 A B 424 59.144 118.742 18.108 1.00 46.08 O
ATOM 4 OP2 A B 424 60.960 117.149 18.975 1.00 46.97 O
ATOM 5 O5' A B 424 58.975 116.273 17.742 1.00 45.10 O
ATOM 6 C5' A B 424 57.781 116.385 16.955 1.00 42.74 C
ATOM 7 C4' A B 424 56.984 115.117 17.073 1.00 43.52 C
ATOM 8 O4' A B 424 57.736 114.032 16.477 1.00 42.01 O
ATOM 9 C3' A B 424 56.737 114.672 18.507 1.00 43.30 C
ATOM 10 O3' A B 424 55.588 115.321 19.033 1.00 44.80 O
ATOM 11 C2' A B 424 56.564 113.167 18.365 1.00 42.64 C
ATOM 12 O2' A B 424 55.263 112.814 17.938 1.00 41.88 O
ATOM 13 C1' A B 424 57.563 112.855 17.245 1.00 41.63 C
ATOM 14 N9 A B 424 58.889 112.421 17.676 1.00 41.82 N
ATOM 15 C8 A B 424 59.968 113.203 18.004 1.00 40.98 C
ATOM 16 N7 A B 424 61.054 112.519 18.268 1.00 42.02 N
ATOM 17 C5 A B 424 60.658 111.196 18.123 1.00 41.35 C
ATOM 18 C6 A B 424 61.352 109.978 18.253 1.00 41.21 C
ATOM 19 N6 A B 424 62.644 109.887 18.566 1.00 41.66 N
ATOM 20 N1 A B 424 60.661 108.838 18.047 1.00 42.06 N
ATOM 21 C2 A B 424 59.361 108.926 17.737 1.00 42.99 C
ATOM 22 N3 A B 424 58.601 110.007 17.583 1.00 41.21 N
ATOM 23 C4 A B 424 59.320 111.122 17.786 1.00 41.56 C
ATOM 24 P A B 425 55.515 115.667 20.598 1.00 48.75 P
ATOM 25 OP1 A B 425 54.378 116.596 20.805 1.00 47.18 O
ATOM 26 OP2 A B 425 56.870 116.044 21.079 1.00 49.23 O
ATOM 27 O5' A B 425 55.129 114.278 21.267 1.00 49.02 O
TER
ATOM 2 P A A 192 64.142 99.337 16.231 1.00 48.02 P
ATOM 3 OP1 A A 192 62.772 99.580 16.759 1.00 47.53 O
ATOM 4 OP2 A A 192 64.491 99.799 14.862 1.00 49.81 O
ATOM 5 O5' A A 192 65.186 99.984 17.237 1.00 47.46 O
ATOM 6 C5' A A 192 66.593 99.681 17.137 1.00 42.69 C
ATOM 7 C4' A A 192 67.406 100.914 17.452 1.00 40.17 C
ATOM 8 O4' A A 192 67.161 101.930 16.440 1.00 38.48 O
ATOM 9 C3' A A 192 67.014 101.608 18.741 1.00 38.51 C
ATOM 10 O3' A A 192 67.564 100.976 19.881 1.00 39.04 O
ATOM 11 C2' A A 192 67.533 103.014 18.509 1.00 37.56 C
ATOM 12 O2' A A 192 68.934 103.101 18.662 1.00 37.84 O
ATOM 13 C1' A A 192 67.156 103.213 17.042 1.00 37.26 C
ATOM 14 N9 A A 192 65.810 103.765 16.920 1.00 35.50 N
ATOM 15 C8 A A 192 64.676 103.162 16.434 1.00 34.15 C
ATOM 16 N7 A A 192 63.607 103.921 16.495 1.00 36.17 N
ATOM 17 C5 A A 192 64.069 105.107 17.053 1.00 34.73 C
ATOM 18 C6 A A 192 63.422 106.313 17.398 1.00 34.82 C
ATOM 19 N6 A A 192 62.117 106.538 17.230 1.00 34.59 N
ATOM 20 N1 A A 192 64.176 107.292 17.938 1.00 35.41 N
ATOM 21 C2 A A 192 65.489 107.067 18.121 1.00 36.35 C
ATOM 22 N3 A A 192 66.206 105.980 17.845 1.00 32.93 N
ATOM 23 C4 A A 192 65.427 105.027 17.309 1.00 34.99 C
ATOM 24 P U A 193 66.726 100.956 21.252 1.00 37.77 P
ATOM 25 OP1 U A 193 67.633 100.329 22.254 1.00 36.34 O
ATOM 26 OP2 U A 193 65.374 100.395 21.027 1.00 37.52 O
ATOM 27 O5' U A 193 66.519 102.499 21.583 1.00 39.22 O
TER
ATOM 1 O3' A B 423 60.706 117.616 16.538 1.00 43.72 O
ATOM 2 P A B 424 59.953 117.510 17.943 1.00 44.26 P
ATOM 3 OP1 A B 424 59.144 118.742 18.108 1.00 46.08 O
ATOM 4 OP2 A B 424 60.960 117.149 18.975 1.00 46.97 O
ATOM 5 O5' A B 424 58.975 116.273 17.742 1.00 45.10 O
ATOM 6 C5' A B 424 57.781 116.385 16.955 1.00 42.74 C
ATOM 7 C4' A B 424 56.984 115.117 17.073 1.00 43.52 C
ATOM 8 O4' A B 424 57.736 114.032 16.477 1.00 42.01 O
ATOM 9 C3' A B 424 56.737 114.672 18.507 1.00 43.30 C
ATOM 10 O3' A B 424 55.588 115.321 19.033 1.00 44.80 O
ATOM 11 C2' A B 424 56.564 113.167 18.365 1.00 42.64 C
ATOM 12 O2' A B 424 55.263 112.814 17.938 1.00 41.88 O
ATOM 13 C1' A B 424 57.563 112.855 17.245 1.00 41.63 C
ATOM 14 N9 A B 424 58.889 112.421 17.676 1.00 41.82 N
ATOM 15 C8 A B 424 59.968 113.203 18.004 1.00 40.98 C
ATOM 16 N7 A B 424 61.054 112.519 18.268 1.00 42.02 N
ATOM 17 C5 A B 424 60.658 111.196 18.123 1.00 41.35 C
ATOM 18 C6 A B 424 61.352 109.978 18.253 1.00 41.21 C
ATOM 19 N6 A B 424 62.644 109.887 18.566 1.00 41.66 N
ATOM 20 N1 A B 424 60.661 108.838 18.047 1.00 42.06 N
ATOM 21 C2 A B 424 59.361 108.926 17.737 1.00 42.99 C
ATOM 22 N3 A B 424 58.601 110.007 17.583 1.00 41.21 N
ATOM 23 C4 A B 424 59.320 111.122 17.786 1.00 41.56 C
ATOM 24 P A B 425 55.515 115.667 20.598 1.00 48.75 P
ATOM 25 OP1 A B 425 54.378 116.596 20.805 1.00 47.18 O
ATOM 26 OP2 A B 425 56.870 116.044 21.079 1.00 49.23 O
ATOM 27 O5' A B 425 55.129 114.278 21.267 1.00 49.02 O
TER
Atoms:
OP1: (62.772,99.580,16.759)
OP2: (64.491,99.799,14.862)
C3': (67.014,101.608,18.741)
C1': (67.156,103.213,17.042)
C5': (66.593,99.681,17.137)
O4': (67.161,101.930,16.440)
C8: (64.676,103.162,16.434)
O2': (68.934,103.101,18.662)
C6: (63.422,106.313,17.398)
C5: (64.069,105.107,17.053)
C4: (65.427,105.027,17.309)
P: (64.142,99.337,16.231)
C4': (67.406,100.914,17.452)
C2': (67.533,103.014,18.509)
C2: (65.489,107.067,18.121)
N1: (64.176,107.292,17.938)
N3: (66.206,105.980,17.845)
N6: (62.117,106.538,17.230)
N7: (63.607,103.921,16.495)
N9: (65.810,103.765,16.920)
O5': (65.186,99.984,17.237)
O3': (67.564,100.976,19.881)
OP2: (64.491,99.799,14.862)
C3': (67.014,101.608,18.741)
C1': (67.156,103.213,17.042)
C5': (66.593,99.681,17.137)
O4': (67.161,101.930,16.440)
C8: (64.676,103.162,16.434)
O2': (68.934,103.101,18.662)
C6: (63.422,106.313,17.398)
C5: (64.069,105.107,17.053)
C4: (65.427,105.027,17.309)
P: (64.142,99.337,16.231)
C4': (67.406,100.914,17.452)
C2': (67.533,103.014,18.509)
C2: (65.489,107.067,18.121)
N1: (64.176,107.292,17.938)
N3: (66.206,105.980,17.845)
N6: (62.117,106.538,17.230)
N7: (63.607,103.921,16.495)
N9: (65.810,103.765,16.920)
O5': (65.186,99.984,17.237)
O3': (67.564,100.976,19.881)
OP1: (59.144,118.742,18.108)
OP2: (60.960,117.149,18.975)
C3': (56.737,114.672,18.507)
C1': (57.563,112.855,17.245)
C5': (57.781,116.385,16.955)
O4': (57.736,114.032,16.477)
C8: (59.968,113.203,18.004)
O2': (55.263,112.814,17.938)
C6: (61.352,109.978,18.253)
C5: (60.658,111.196,18.123)
C4: (59.320,111.122,17.786)
P: (59.953,117.510,17.943)
C4': (56.984,115.117,17.073)
C2': (56.564,113.167,18.365)
C2: (59.361,108.926,17.737)
N1: (60.661,108.838,18.047)
N3: (58.601,110.007,17.583)
N6: (62.644,109.887,18.566)
N7: (61.054,112.519,18.268)
N9: (58.889,112.421,17.676)
O5': (58.975,116.273,17.742)
O3': (55.588,115.321,19.033)
OP2: (60.960,117.149,18.975)
C3': (56.737,114.672,18.507)
C1': (57.563,112.855,17.245)
C5': (57.781,116.385,16.955)
O4': (57.736,114.032,16.477)
C8: (59.968,113.203,18.004)
O2': (55.263,112.814,17.938)
C6: (61.352,109.978,18.253)
C5: (60.658,111.196,18.123)
C4: (59.320,111.122,17.786)
P: (59.953,117.510,17.943)
C4': (56.984,115.117,17.073)
C2': (56.564,113.167,18.365)
C2: (59.361,108.926,17.737)
N1: (60.661,108.838,18.047)
N3: (58.601,110.007,17.583)
N6: (62.644,109.887,18.566)
N7: (61.054,112.519,18.268)
N9: (58.889,112.421,17.676)
O5': (58.975,116.273,17.742)
O3': (55.588,115.321,19.033)
Image (generated by PyMOL):