Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1833:A1813
Extra
PDB:
ATOM 1 O3' U A1832 122.282 133.198 62.338 1.00 50.22 O
ATOM 2 P A A1833 123.844 133.058 62.614 1.00 49.16 P
ATOM 3 OP1 A A1833 124.330 134.472 62.613 1.00 49.49 O
ATOM 4 OP2 A A1833 124.396 132.096 61.629 1.00 49.08 O
ATOM 5 O5' A A1833 123.912 132.415 64.073 1.00 47.92 O
ATOM 6 C5' A A1833 123.370 133.111 65.220 1.00 47.47 C
ATOM 7 C4' A A1833 123.206 132.161 66.383 1.00 47.02 C
ATOM 8 O4' A A1833 122.249 131.141 65.989 1.00 47.73 O
ATOM 9 C3' A A1833 124.470 131.411 66.788 1.00 47.17 C
ATOM 10 O3' A A1833 124.446 131.101 68.176 1.00 47.71 O
ATOM 11 C2' A A1833 124.359 130.132 65.977 1.00 47.82 C
ATOM 12 O2' A A1833 125.105 129.047 66.486 1.00 49.81 O
ATOM 13 C1' A A1833 122.860 129.867 66.063 1.00 47.16 C
ATOM 14 N9 A A1833 122.380 129.032 64.963 1.00 45.34 N
ATOM 15 C8 A A1833 121.973 129.416 63.712 1.00 44.84 C
ATOM 16 N7 A A1833 121.665 128.410 62.926 1.00 44.49 N
ATOM 17 C5 A A1833 121.869 127.290 63.722 1.00 43.51 C
ATOM 18 C6 A A1833 121.740 125.911 63.475 1.00 43.02 C
ATOM 19 N6 A A1833 121.358 125.397 62.298 1.00 42.53 N
ATOM 20 N1 A A1833 122.026 125.063 64.492 1.00 42.87 N
ATOM 21 C2 A A1833 122.416 125.574 65.669 1.00 42.32 C
ATOM 22 N3 A A1833 122.581 126.845 66.018 1.00 42.12 N
ATOM 23 C4 A A1833 122.290 127.660 64.987 1.00 43.81 C
ATOM 24 P C A1834 125.608 131.662 69.128 1.00 48.66 P
ATOM 25 OP1 C A1834 126.738 131.837 68.188 1.00 48.75 O
ATOM 26 OP2 C A1834 125.778 130.768 70.308 1.00 47.87 O
ATOM 27 O5' C A1834 125.073 133.109 69.582 1.00 49.05 O
TER
ATOM 1 O3' C B1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 2 P G B1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 3 OP1 G B1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 4 OP2 G B1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 5 O5' G B1813 121.188 122.923 60.333 1.00 47.01 O
ATOM 6 C5' G B1813 120.459 123.584 59.275 1.00 47.40 C
ATOM 7 C4' G B1813 121.416 124.310 58.347 1.00 48.24 C
ATOM 8 O4' G B1813 122.087 125.367 59.083 1.00 48.52 O
ATOM 9 C3' G B1813 122.536 123.481 57.718 1.00 49.28 C
ATOM 10 O3' G B1813 122.906 124.032 56.461 1.00 49.47 O
ATOM 11 C2' G B1813 123.701 123.753 58.649 1.00 48.70 C
ATOM 12 O2' G B1813 124.952 123.523 58.040 1.00 50.45 O
ATOM 13 C1' G B1813 123.482 125.233 58.938 1.00 47.48 C
ATOM 14 N9 G B1813 124.111 125.738 60.152 1.00 46.40 N
ATOM 15 C8 G B1813 124.819 125.028 61.089 1.00 45.74 C
ATOM 16 N7 G B1813 125.262 125.770 62.064 1.00 45.59 N
ATOM 17 C5 G B1813 124.821 127.047 61.756 1.00 45.38 C
ATOM 18 C6 G B1813 125.006 128.267 62.447 1.00 45.96 C
ATOM 19 O6 G B1813 125.617 128.470 63.508 1.00 45.83 O
ATOM 20 N1 G B1813 124.400 129.326 61.782 1.00 47.13 N
ATOM 21 C2 G B1813 123.708 129.222 60.597 1.00 47.03 C
ATOM 22 N2 G B1813 123.218 130.357 60.093 1.00 47.53 N
ATOM 23 N3 G B1813 123.519 128.086 59.949 1.00 46.95 N
ATOM 24 C4 G B1813 124.105 127.046 60.579 1.00 46.31 C
ATOM 25 P C B1814 121.964 123.803 55.191 1.00 50.89 P
ATOM 26 OP1 C B1814 121.274 122.493 55.376 1.00 48.77 O
ATOM 27 OP2 C B1814 122.739 124.047 53.957 1.00 51.02 O
ATOM 28 O5' C B1814 120.905 124.978 55.345 1.00 51.47 O
TER
ATOM 2 P A A1833 123.844 133.058 62.614 1.00 49.16 P
ATOM 3 OP1 A A1833 124.330 134.472 62.613 1.00 49.49 O
ATOM 4 OP2 A A1833 124.396 132.096 61.629 1.00 49.08 O
ATOM 5 O5' A A1833 123.912 132.415 64.073 1.00 47.92 O
ATOM 6 C5' A A1833 123.370 133.111 65.220 1.00 47.47 C
ATOM 7 C4' A A1833 123.206 132.161 66.383 1.00 47.02 C
ATOM 8 O4' A A1833 122.249 131.141 65.989 1.00 47.73 O
ATOM 9 C3' A A1833 124.470 131.411 66.788 1.00 47.17 C
ATOM 10 O3' A A1833 124.446 131.101 68.176 1.00 47.71 O
ATOM 11 C2' A A1833 124.359 130.132 65.977 1.00 47.82 C
ATOM 12 O2' A A1833 125.105 129.047 66.486 1.00 49.81 O
ATOM 13 C1' A A1833 122.860 129.867 66.063 1.00 47.16 C
ATOM 14 N9 A A1833 122.380 129.032 64.963 1.00 45.34 N
ATOM 15 C8 A A1833 121.973 129.416 63.712 1.00 44.84 C
ATOM 16 N7 A A1833 121.665 128.410 62.926 1.00 44.49 N
ATOM 17 C5 A A1833 121.869 127.290 63.722 1.00 43.51 C
ATOM 18 C6 A A1833 121.740 125.911 63.475 1.00 43.02 C
ATOM 19 N6 A A1833 121.358 125.397 62.298 1.00 42.53 N
ATOM 20 N1 A A1833 122.026 125.063 64.492 1.00 42.87 N
ATOM 21 C2 A A1833 122.416 125.574 65.669 1.00 42.32 C
ATOM 22 N3 A A1833 122.581 126.845 66.018 1.00 42.12 N
ATOM 23 C4 A A1833 122.290 127.660 64.987 1.00 43.81 C
ATOM 24 P C A1834 125.608 131.662 69.128 1.00 48.66 P
ATOM 25 OP1 C A1834 126.738 131.837 68.188 1.00 48.75 O
ATOM 26 OP2 C A1834 125.778 130.768 70.308 1.00 47.87 O
ATOM 27 O5' C A1834 125.073 133.109 69.582 1.00 49.05 O
TER
ATOM 1 O3' C B1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 2 P G B1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 3 OP1 G B1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 4 OP2 G B1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 5 O5' G B1813 121.188 122.923 60.333 1.00 47.01 O
ATOM 6 C5' G B1813 120.459 123.584 59.275 1.00 47.40 C
ATOM 7 C4' G B1813 121.416 124.310 58.347 1.00 48.24 C
ATOM 8 O4' G B1813 122.087 125.367 59.083 1.00 48.52 O
ATOM 9 C3' G B1813 122.536 123.481 57.718 1.00 49.28 C
ATOM 10 O3' G B1813 122.906 124.032 56.461 1.00 49.47 O
ATOM 11 C2' G B1813 123.701 123.753 58.649 1.00 48.70 C
ATOM 12 O2' G B1813 124.952 123.523 58.040 1.00 50.45 O
ATOM 13 C1' G B1813 123.482 125.233 58.938 1.00 47.48 C
ATOM 14 N9 G B1813 124.111 125.738 60.152 1.00 46.40 N
ATOM 15 C8 G B1813 124.819 125.028 61.089 1.00 45.74 C
ATOM 16 N7 G B1813 125.262 125.770 62.064 1.00 45.59 N
ATOM 17 C5 G B1813 124.821 127.047 61.756 1.00 45.38 C
ATOM 18 C6 G B1813 125.006 128.267 62.447 1.00 45.96 C
ATOM 19 O6 G B1813 125.617 128.470 63.508 1.00 45.83 O
ATOM 20 N1 G B1813 124.400 129.326 61.782 1.00 47.13 N
ATOM 21 C2 G B1813 123.708 129.222 60.597 1.00 47.03 C
ATOM 22 N2 G B1813 123.218 130.357 60.093 1.00 47.53 N
ATOM 23 N3 G B1813 123.519 128.086 59.949 1.00 46.95 N
ATOM 24 C4 G B1813 124.105 127.046 60.579 1.00 46.31 C
ATOM 25 P C B1814 121.964 123.803 55.191 1.00 50.89 P
ATOM 26 OP1 C B1814 121.274 122.493 55.376 1.00 48.77 O
ATOM 27 OP2 C B1814 122.739 124.047 53.957 1.00 51.02 O
ATOM 28 O5' C B1814 120.905 124.978 55.345 1.00 51.47 O
TER
Atoms:
OP1: (124.330,134.472,62.613)
OP2: (124.396,132.096,61.629)
C3': (124.470,131.411,66.788)
C1': (122.860,129.867,66.063)
C5': (123.370,133.111,65.220)
O4': (122.249,131.141,65.989)
C8: (121.973,129.416,63.712)
O2': (125.105,129.047,66.486)
C6: (121.740,125.911,63.475)
C5: (121.869,127.290,63.722)
C4: (122.290,127.660,64.987)
P: (123.844,133.058,62.614)
C4': (123.206,132.161,66.383)
C2': (124.359,130.132,65.977)
C2: (122.416,125.574,65.669)
N1: (122.026,125.063,64.492)
N3: (122.581,126.845,66.018)
N6: (121.358,125.397,62.298)
N7: (121.665,128.410,62.926)
N9: (122.380,129.032,64.963)
O5': (123.912,132.415,64.073)
O3': (124.446,131.101,68.176)
OP2: (124.396,132.096,61.629)
C3': (124.470,131.411,66.788)
C1': (122.860,129.867,66.063)
C5': (123.370,133.111,65.220)
O4': (122.249,131.141,65.989)
C8: (121.973,129.416,63.712)
O2': (125.105,129.047,66.486)
C6: (121.740,125.911,63.475)
C5: (121.869,127.290,63.722)
C4: (122.290,127.660,64.987)
P: (123.844,133.058,62.614)
C4': (123.206,132.161,66.383)
C2': (124.359,130.132,65.977)
C2: (122.416,125.574,65.669)
N1: (122.026,125.063,64.492)
N3: (122.581,126.845,66.018)
N6: (121.358,125.397,62.298)
N7: (121.665,128.410,62.926)
N9: (122.380,129.032,64.963)
O5': (123.912,132.415,64.073)
O3': (124.446,131.101,68.176)
OP1: (121.151,120.624,59.370)
OP2: (121.743,120.950,61.846)
C3': (122.536,123.481,57.718)
C1': (123.482,125.233,58.938)
C5': (120.459,123.584,59.275)
O6: (125.617,128.470,63.508)
O4': (122.087,125.367,59.083)
C8: (124.819,125.028,61.089)
C2: (123.708,129.222,60.597)
C6: (125.006,128.267,62.447)
C5: (124.821,127.047,61.756)
C4: (124.105,127.046,60.579)
P: (120.973,121.366,60.634)
C4': (121.416,124.310,58.347)
C2': (123.701,123.753,58.649)
O2': (124.952,123.523,58.040)
N1: (124.400,129.326,61.782)
N2: (123.218,130.357,60.093)
N3: (123.519,128.086,59.949)
N7: (125.262,125.770,62.064)
N9: (124.111,125.738,60.152)
O5': (121.188,122.923,60.333)
O3': (122.906,124.032,56.461)
OP2: (121.743,120.950,61.846)
C3': (122.536,123.481,57.718)
C1': (123.482,125.233,58.938)
C5': (120.459,123.584,59.275)
O6: (125.617,128.470,63.508)
O4': (122.087,125.367,59.083)
C8: (124.819,125.028,61.089)
C2: (123.708,129.222,60.597)
C6: (125.006,128.267,62.447)
C5: (124.821,127.047,61.756)
C4: (124.105,127.046,60.579)
P: (120.973,121.366,60.634)
C4': (121.416,124.310,58.347)
C2': (123.701,123.753,58.649)
O2': (124.952,123.523,58.040)
N1: (124.400,129.326,61.782)
N2: (123.218,130.357,60.093)
N3: (123.519,128.086,59.949)
N7: (125.262,125.770,62.064)
N9: (124.111,125.738,60.152)
O5': (121.188,122.923,60.333)
O3': (122.906,124.032,56.461)
Image (generated by PyMOL):