ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2719:A1747

Extra

PDB:
ATOM 1 O3' A A2718 99.809 210.785 109.925 1.00 90.46 O
ATOM 2 P A A2719 98.595 209.873 110.429 1.00 89.14 P
ATOM 3 OP1 A A2719 97.461 210.784 110.732 1.00 89.27 O
ATOM 4 OP2 A A2719 99.141 209.001 111.496 1.00 87.78 O
ATOM 5 O5' A A2719 98.223 208.993 109.148 1.00 88.01 O
ATOM 6 C5' A A2719 97.682 209.608 107.955 1.00 87.23 C
ATOM 7 C4' A A2719 97.651 208.617 106.804 1.00 87.20 C
ATOM 8 O4' A A2719 99.006 208.232 106.442 1.00 86.99 O
ATOM 9 C3' A A2719 96.948 207.297 107.085 1.00 87.13 C
ATOM 10 O3' A A2719 95.535 207.413 106.955 1.00 86.56 O
ATOM 11 C2' A A2719 97.590 206.354 106.067 1.00 86.92 C
ATOM 12 O2' A A2719 97.077 206.413 104.750 1.00 87.01 O
ATOM 13 C1' A A2719 99.033 206.857 106.083 1.00 86.52 C
ATOM 14 N9 A A2719 99.799 206.140 107.097 1.00 85.73 N
ATOM 15 C8 A A2719 99.954 206.438 108.431 1.00 85.62 C
ATOM 16 N7 A A2719 100.683 205.569 109.084 1.00 85.53 N
ATOM 17 C5 A A2719 101.041 204.642 108.114 1.00 85.44 C
ATOM 18 C6 A A2719 101.819 203.475 108.166 1.00 84.97 C
ATOM 19 N6 A A2719 102.408 203.034 109.276 1.00 84.37 N
ATOM 20 N1 A A2719 101.977 202.772 107.022 1.00 85.17 N
ATOM 21 C2 A A2719 101.396 203.228 105.905 1.00 85.47 C
ATOM 22 N3 A A2719 100.647 204.314 105.728 1.00 85.25 N
ATOM 23 C4 A A2719 100.506 204.984 106.886 1.00 85.62 C
ATOM 24 P C A2720 94.580 206.963 108.170 1.00 85.57 P
ATOM 25 OP1 C A2720 93.203 206.979 107.624 1.00 86.34 O
ATOM 26 OP2 C A2720 94.901 207.753 109.393 1.00 85.73 O
ATOM 27 O5' C A2720 94.965 205.444 108.423 1.00 84.09 O
TER

ATOM 1 O3' U B1746 103.173 199.081 111.171 1.00 68.34 O
ATOM 2 P G B1747 103.988 199.163 109.805 1.00 69.70 P
ATOM 3 OP1 G B1747 103.803 200.544 109.305 1.00 70.23 O
ATOM 4 OP2 G B1747 103.604 198.011 108.943 1.00 68.71 O
ATOM 5 O5' G B1747 105.502 198.976 110.265 1.00 68.66 O
ATOM 6 C5' G B1747 106.155 199.970 111.063 1.00 67.06 C
ATOM 7 C4' G B1747 107.523 199.496 111.466 1.00 66.52 C
ATOM 8 O4' G B1747 107.396 198.294 112.266 1.00 66.28 O
ATOM 9 C3' G B1747 108.424 199.063 110.323 1.00 65.89 C
ATOM 10 O3' G B1747 109.060 200.148 109.648 1.00 65.73 O
ATOM 11 C2' G B1747 109.425 198.170 111.036 1.00 67.09 C
ATOM 12 O2' G B1747 110.443 198.899 111.689 1.00 67.48 O
ATOM 13 C1' G B1747 108.527 197.465 112.054 1.00 68.31 C
ATOM 14 N9 G B1747 108.085 196.159 111.568 1.00 71.42 N
ATOM 15 C8 G B1747 106.923 195.853 110.897 1.00 71.98 C
ATOM 16 N7 G B1747 106.852 194.597 110.545 1.00 71.96 N
ATOM 17 C5 G B1747 108.028 194.034 111.024 1.00 72.24 C
ATOM 18 C6 G B1747 108.520 192.697 110.937 1.00 72.17 C
ATOM 19 O6 G B1747 107.997 191.714 110.403 1.00 70.89 O
ATOM 20 N1 G B1747 109.759 192.568 111.555 1.00 73.48 N
ATOM 21 C2 G B1747 110.441 193.586 112.176 1.00 74.09 C
ATOM 22 N2 G B1747 111.617 193.270 112.716 1.00 74.66 N
ATOM 23 N3 G B1747 109.999 194.829 112.261 1.00 73.71 N
ATOM 24 C4 G B1747 108.794 194.981 111.668 1.00 72.54 C
ATOM 25 P C B1748 109.972 199.857 108.350 1.00 65.87 P
ATOM 26 OP1 C B1748 110.711 201.110 108.045 1.00 66.17 O
ATOM 27 OP2 C B1748 109.122 199.235 107.300 1.00 66.68 O
ATOM 28 O5' C B1748 111.029 198.776 108.861 1.00 65.35 O
TER

Atoms:
OP1: (97.461,210.784,110.732)
OP2: (99.141,209.001,111.496)
C3': (96.948,207.297,107.085)
C1': (99.033,206.857,106.083)
C5': (97.682,209.608,107.955)
O4': (99.006,208.232,106.442)
C8: (99.954,206.438,108.431)
O2': (97.077,206.413,104.750)
C6: (101.819,203.475,108.166)
C5: (101.041,204.642,108.114)
C4: (100.506,204.984,106.886)
P: (98.595,209.873,110.429)
C4': (97.651,208.617,106.804)
C2': (97.590,206.354,106.067)
C2: (101.396,203.228,105.905)
N1: (101.977,202.772,107.022)
N3: (100.647,204.314,105.728)
N6: (102.408,203.034,109.276)
N7: (100.683,205.569,109.084)
N9: (99.799,206.140,107.097)
O5': (98.223,208.993,109.148)
O3': (95.535,207.413,106.955)
OP1: (103.803,200.544,109.305)
OP2: (103.604,198.011,108.943)
C3': (108.424,199.063,110.323)
C1': (108.527,197.465,112.054)
C5': (106.155,199.970,111.063)
O6: (107.997,191.714,110.403)
O4': (107.396,198.294,112.266)
C8: (106.923,195.853,110.897)
C2: (110.441,193.586,112.176)
C6: (108.520,192.697,110.937)
C5: (108.028,194.034,111.024)
C4: (108.794,194.981,111.668)
P: (103.988,199.163,109.805)
C4': (107.523,199.496,111.466)
C2': (109.425,198.170,111.036)
O2': (110.443,198.899,111.689)
N1: (109.759,192.568,111.555)
N2: (111.617,193.270,112.716)
N3: (109.999,194.829,112.261)
N7: (106.852,194.597,110.545)
N9: (108.085,196.159,111.568)
O5': (105.502,198.976,110.265)
O3': (109.060,200.148,109.648)
Image (generated by PyMOL):
PyMOL image
show in jmol