ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01833:01813

Extra

PDB:
ATOM 1 O3' U A1832 121.946 132.234 61.586 1.00 43.28 O
ATOM 2 P A A1833 123.533 132.178 61.845 1.00 44.23 P
ATOM 3 OP1 A A1833 124.022 133.588 61.886 1.00 47.52 O
ATOM 4 OP2 A A1833 124.155 131.217 60.904 1.00 43.34 O
ATOM 5 O5' A A1833 123.641 131.554 63.303 1.00 41.07 O
ATOM 6 C5' A A1833 122.963 132.167 64.414 1.00 40.79 C
ATOM 7 C4' A A1833 122.872 131.197 65.568 1.00 41.44 C
ATOM 8 O4' A A1833 121.953 130.126 65.219 1.00 41.98 O
ATOM 9 C3' A A1833 124.183 130.523 65.944 1.00 43.15 C
ATOM 10 O3' A A1833 124.216 130.273 67.346 1.00 45.91 O
ATOM 11 C2' A A1833 124.110 129.217 65.159 1.00 42.52 C
ATOM 12 O2' A A1833 124.932 128.193 65.693 1.00 42.25 O
ATOM 13 C1' A A1833 122.622 128.884 65.278 1.00 41.82 C
ATOM 14 N9 A A1833 122.109 128.034 64.201 1.00 41.94 N
ATOM 15 C8 A A1833 121.592 128.426 62.988 1.00 40.86 C
ATOM 16 N7 A A1833 121.256 127.426 62.210 1.00 41.29 N
ATOM 17 C5 A A1833 121.557 126.299 62.964 1.00 41.76 C
ATOM 18 C6 A A1833 121.435 124.916 62.695 1.00 42.98 C
ATOM 19 N6 A A1833 120.954 124.425 61.549 1.00 43.45 N
ATOM 20 N1 A A1833 121.831 124.049 63.656 1.00 42.15 N
ATOM 21 C2 A A1833 122.308 124.546 64.808 1.00 44.78 C
ATOM 22 N3 A A1833 122.468 125.826 65.178 1.00 44.34 N
ATOM 23 C4 A A1833 122.072 126.659 64.197 1.00 41.66 C
ATOM 24 P C A1834 125.338 130.978 68.259 1.00 47.47 P
ATOM 25 OP1 C A1834 126.522 131.308 67.426 1.00 49.98 O
ATOM 26 OP2 C A1834 125.502 130.133 69.464 1.00 46.96 O
ATOM 27 O5' C A1834 124.676 132.354 68.701 1.00 49.52 O
TER

ATOM 1 O3' C B1812 119.134 120.211 60.227 1.00 47.73 O
ATOM 2 P G B1813 120.708 120.247 59.904 1.00 46.64 P
ATOM 3 OP1 G B1813 120.908 119.425 58.694 1.00 47.33 O
ATOM 4 OP2 G B1813 121.465 119.928 61.135 1.00 45.97 O
ATOM 5 O5' G B1813 120.980 121.766 59.508 1.00 47.00 O
ATOM 6 C5' G B1813 120.207 122.394 58.474 1.00 44.92 C
ATOM 7 C4' G B1813 121.100 123.206 57.569 1.00 46.60 C
ATOM 8 O4' G B1813 121.674 124.302 58.329 1.00 44.56 O
ATOM 9 C3' G B1813 122.275 122.467 56.921 1.00 46.88 C
ATOM 10 O3' G B1813 122.570 123.031 55.648 1.00 49.52 O
ATOM 11 C2' G B1813 123.436 122.832 57.838 1.00 46.82 C
ATOM 12 O2' G B1813 124.688 122.794 57.177 1.00 43.80 O
ATOM 13 C1' G B1813 123.074 124.272 58.194 1.00 45.60 C
ATOM 14 N9 G B1813 123.673 124.798 59.415 1.00 44.82 N
ATOM 15 C8 G B1813 124.335 124.108 60.400 1.00 43.25 C
ATOM 16 N7 G B1813 124.816 124.886 61.330 1.00 43.51 N
ATOM 17 C5 G B1813 124.440 126.161 60.937 1.00 43.71 C
ATOM 18 C6 G B1813 124.697 127.411 61.532 1.00 44.07 C
ATOM 19 O6 G B1813 125.359 127.655 62.543 1.00 47.82 O
ATOM 20 N1 G B1813 124.103 128.448 60.820 1.00 43.03 N
ATOM 21 C2 G B1813 123.373 128.297 59.668 1.00 43.78 C
ATOM 22 N2 G B1813 122.863 129.410 59.129 1.00 43.34 N
ATOM 23 N3 G B1813 123.155 127.136 59.087 1.00 44.90 N
ATOM 24 C4 G B1813 123.711 126.117 59.773 1.00 44.23 C
ATOM 25 P C B1814 121.588 122.778 54.410 1.00 50.89 P
ATOM 26 OP1 C B1814 121.006 121.425 54.553 1.00 51.86 O
ATOM 27 OP2 C B1814 122.311 123.136 53.162 1.00 53.84 O
ATOM 28 O5' C B1814 120.450 123.865 54.635 1.00 50.92 O
TER

Atoms:
OP1: (124.022,133.588,61.886)
OP2: (124.155,131.217,60.904)
C3': (124.183,130.523,65.944)
C1': (122.622,128.884,65.278)
C5': (122.963,132.167,64.414)
O4': (121.953,130.126,65.219)
C8: (121.592,128.426,62.988)
O2': (124.932,128.193,65.693)
C6: (121.435,124.916,62.695)
C5: (121.557,126.299,62.964)
C4: (122.072,126.659,64.197)
P: (123.533,132.178,61.845)
C4': (122.872,131.197,65.568)
C2': (124.110,129.217,65.159)
C2: (122.308,124.546,64.808)
N1: (121.831,124.049,63.656)
N3: (122.468,125.826,65.178)
N6: (120.954,124.425,61.549)
N7: (121.256,127.426,62.210)
N9: (122.109,128.034,64.201)
O5': (123.641,131.554,63.303)
O3': (124.216,130.273,67.346)
OP1: (120.908,119.425,58.694)
OP2: (121.465,119.928,61.135)
C3': (122.275,122.467,56.921)
C1': (123.074,124.272,58.194)
C5': (120.207,122.394,58.474)
O6: (125.359,127.655,62.543)
O4': (121.674,124.302,58.329)
C8: (124.335,124.108,60.400)
C2: (123.373,128.297,59.668)
C6: (124.697,127.411,61.532)
C5: (124.440,126.161,60.937)
C4: (123.711,126.117,59.773)
P: (120.708,120.247,59.904)
C4': (121.100,123.206,57.569)
C2': (123.436,122.832,57.838)
O2': (124.688,122.794,57.177)
N1: (124.103,128.448,60.820)
N2: (122.863,129.410,59.129)
N3: (123.155,127.136,59.087)
N7: (124.816,124.886,61.330)
N9: (123.673,124.798,59.415)
O5': (120.980,121.766,59.508)
O3': (122.570,123.031,55.648)
Image (generated by PyMOL):
PyMOL image
show in jmol