ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0473:0497

Extra

PDB:
ATOM 1 O3' A A 472 22.560 155.783 45.150 1.00 36.25 O
ATOM 2 P A A 473 24.017 156.235 45.659 1.00 38.35 P
ATOM 3 OP1 A A 473 24.709 156.805 44.477 1.00 36.91 O
ATOM 4 OP2 A A 473 24.647 155.105 46.396 1.00 38.15 O
ATOM 5 O5' A A 473 23.698 157.411 46.692 1.00 35.44 O
ATOM 6 C5' A A 473 24.666 158.432 46.973 1.00 33.66 C
ATOM 7 C4' A A 473 24.106 159.438 47.956 1.00 35.44 C
ATOM 8 O4' A A 473 23.586 158.748 49.132 1.00 34.28 O
ATOM 9 C3' A A 473 25.142 160.435 48.484 1.00 36.99 C
ATOM 10 O3' A A 473 24.513 161.666 48.873 1.00 39.03 O
ATOM 11 C2' A A 473 25.576 159.751 49.779 1.00 36.06 C
ATOM 12 O2' A A 473 26.182 160.602 50.729 1.00 38.34 O
ATOM 13 C1' A A 473 24.218 159.272 50.279 1.00 35.46 C
ATOM 14 N9 A A 473 24.195 158.291 51.367 1.00 35.44 N
ATOM 15 C8 A A 473 24.906 157.126 51.522 1.00 34.73 C
ATOM 16 N7 A A 473 24.651 156.500 52.649 1.00 34.26 N
ATOM 17 C5 A A 473 23.706 157.304 53.272 1.00 33.10 C
ATOM 18 C6 A A 473 23.030 157.195 54.500 1.00 33.89 C
ATOM 19 N6 A A 473 23.207 156.192 55.358 1.00 33.04 N
ATOM 20 N1 A A 473 22.149 158.168 54.822 1.00 33.56 N
ATOM 21 C2 A A 473 21.964 159.172 53.959 1.00 34.07 C
ATOM 22 N3 A A 473 22.537 159.385 52.777 1.00 33.99 N
ATOM 23 C4 A A 473 23.410 158.404 52.490 1.00 34.06 C
ATOM 24 P A A 474 23.863 162.653 47.779 1.00 39.41 P
ATOM 25 OP1 A A 474 23.793 161.969 46.456 1.00 37.93 O
ATOM 26 OP2 A A 474 24.554 163.959 47.886 1.00 41.70 O
ATOM 27 O5' A A 474 22.387 162.855 48.344 1.00 37.60 O
TER

ATOM 1 O3' A B 496 14.259 152.096 62.652 1.00 44.92 O
ATOM 2 P A B 497 14.207 153.535 63.359 1.00 47.38 P
ATOM 3 OP1 A B 497 13.406 153.355 64.593 1.00 48.36 O
ATOM 4 OP2 A B 497 13.819 154.576 62.366 1.00 47.72 O
ATOM 5 O5' A B 497 15.702 153.801 63.810 1.00 45.60 O
ATOM 6 C5' A B 497 16.699 154.035 62.837 1.00 47.14 C
ATOM 7 C4' A B 497 18.055 153.795 63.418 1.00 46.73 C
ATOM 8 O4' A B 497 19.027 153.894 62.354 1.00 47.25 O
ATOM 9 C3' A B 497 18.503 154.780 64.484 1.00 48.16 C
ATOM 10 O3' A B 497 19.424 154.151 65.361 1.00 53.72 O
ATOM 11 C2' A B 497 19.168 155.878 63.663 1.00 47.67 C
ATOM 12 O2' A B 497 20.209 156.509 64.374 1.00 49.63 O
ATOM 13 C1' A B 497 19.730 155.112 62.461 1.00 46.73 C
ATOM 14 N9 A B 497 19.565 155.838 61.197 1.00 45.02 N
ATOM 15 C8 A B 497 18.560 156.710 60.851 1.00 44.74 C
ATOM 16 N7 A B 497 18.719 157.259 59.674 1.00 44.82 N
ATOM 17 C5 A B 497 19.899 156.703 59.202 1.00 43.52 C
ATOM 18 C6 A B 497 20.629 156.894 58.012 1.00 43.33 C
ATOM 19 N6 A B 497 20.272 157.746 57.050 1.00 42.79 N
ATOM 20 N1 A B 497 21.760 156.178 57.847 1.00 41.38 N
ATOM 21 C2 A B 497 22.131 155.338 58.820 1.00 41.58 C
ATOM 22 N3 A B 497 21.540 155.081 59.986 1.00 42.95 N
ATOM 23 C4 A B 497 20.418 155.807 60.119 1.00 43.37 C
ATOM 24 P U B 498 19.303 154.376 66.950 1.00 55.32 P
ATOM 25 OP1 U B 498 17.893 154.149 67.347 1.00 55.71 O
ATOM 26 OP2 U B 498 19.960 155.655 67.298 1.00 56.58 O
ATOM 27 O5' U B 498 20.167 153.189 67.569 1.00 59.10 O
TER

Atoms:
OP1: (24.709,156.805,44.477)
OP2: (24.647,155.105,46.396)
C3': (25.142,160.435,48.484)
C1': (24.218,159.272,50.279)
C5': (24.666,158.432,46.973)
O4': (23.586,158.748,49.132)
C8: (24.906,157.126,51.522)
O2': (26.182,160.602,50.729)
C6: (23.030,157.195,54.500)
C5: (23.706,157.304,53.272)
C4: (23.410,158.404,52.490)
P: (24.017,156.235,45.659)
C4': (24.106,159.438,47.956)
C2': (25.576,159.751,49.779)
C2: (21.964,159.172,53.959)
N1: (22.149,158.168,54.822)
N3: (22.537,159.385,52.777)
N6: (23.207,156.192,55.358)
N7: (24.651,156.500,52.649)
N9: (24.195,158.291,51.367)
O5': (23.698,157.411,46.692)
O3': (24.513,161.666,48.873)
OP1: (13.406,153.355,64.593)
OP2: (13.819,154.576,62.366)
C3': (18.503,154.780,64.484)
C1': (19.730,155.112,62.461)
C5': (16.699,154.035,62.837)
O4': (19.027,153.894,62.354)
C8: (18.560,156.710,60.851)
O2': (20.209,156.509,64.374)
C6: (20.629,156.894,58.012)
C5: (19.899,156.703,59.202)
C4: (20.418,155.807,60.119)
P: (14.207,153.535,63.359)
C4': (18.055,153.795,63.418)
C2': (19.168,155.878,63.663)
C2: (22.131,155.338,58.820)
N1: (21.760,156.178,57.847)
N3: (21.540,155.081,59.986)
N6: (20.272,157.746,57.050)
N7: (18.719,157.259,59.674)
N9: (19.565,155.838,61.197)
O5': (15.702,153.801,63.810)
O3': (19.424,154.151,65.361)
Image (generated by PyMOL):
PyMOL image
show in jmol