ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XJR:A37:A10

Extra

PDB:
ATOM 1 O3' U A 36 44.456 31.659 36.986 1.00 74.96 O
ATOM 2 P A A 37 45.813 31.029 36.374 1.00 73.42 P
ATOM 3 OP1 A A 37 45.713 31.099 34.892 1.00 72.79 O
ATOM 4 OP2 A A 37 46.095 29.719 37.018 1.00 69.97 O
ATOM 5 O5' A A 37 46.884 32.093 36.888 1.00 71.02 O
ATOM 6 C5' A A 37 46.900 33.417 36.426 1.00 69.97 C
ATOM 7 C4' A A 37 47.915 34.151 37.301 1.00 71.67 C
ATOM 8 O4' A A 37 47.654 33.883 38.717 1.00 71.09 O
ATOM 9 C3' A A 37 49.359 33.742 37.056 1.00 72.31 C
ATOM 10 O3' A A 37 50.178 34.866 37.264 1.00 74.87 O
ATOM 11 C2' A A 37 49.567 32.658 38.115 1.00 72.15 C
ATOM 12 O2' A A 37 50.902 32.538 38.558 1.00 72.17 O
ATOM 13 C1' A A 37 48.731 33.190 39.292 1.00 69.89 C
ATOM 14 N9 A A 37 48.315 32.136 40.233 1.00 69.23 N
ATOM 15 C8 A A 37 47.845 30.870 39.965 1.00 67.61 C
ATOM 16 N7 A A 37 47.608 30.157 41.046 1.00 66.53 N
ATOM 17 C5 A A 37 47.946 31.016 42.085 1.00 67.22 C
ATOM 18 C6 A A 37 47.927 30.906 43.493 1.00 67.73 C
ATOM 19 N6 A A 37 47.543 29.825 44.169 1.00 67.47 N
ATOM 20 N1 A A 37 48.344 31.963 44.217 1.00 67.46 N
ATOM 21 C2 A A 37 48.758 33.075 43.608 1.00 66.65 C
ATOM 22 N3 A A 37 48.815 33.305 42.308 1.00 67.79 N
ATOM 23 C4 A A 37 48.390 32.232 41.600 1.00 68.08 C
ATOM 24 P C A 38 50.579 35.859 36.075 1.00 77.49 P
ATOM 25 OP1 C A 38 49.968 35.349 34.822 1.00 76.99 O
ATOM 26 OP2 C A 38 52.030 36.165 36.225 1.00 76.24 O
ATOM 27 O5' C A 38 49.758 37.182 36.440 1.00 78.65 O
TER

ATOM 1 O3' C B 9 49.930 28.573 47.867 1.00 73.54 O
ATOM 2 P G B 10 48.341 28.657 47.977 1.00 75.21 P
ATOM 3 OP1 G B 10 47.745 27.311 47.994 1.00 76.44 O
ATOM 4 OP2 G B 10 47.755 29.717 47.112 1.00 74.71 O
ATOM 5 O5' G B 10 48.350 29.179 49.484 1.00 78.02 O
ATOM 6 C5' G B 10 47.214 29.082 50.345 1.00 78.18 C
ATOM 7 C4' G B 10 47.568 29.767 51.654 1.00 78.08 C
ATOM 8 O4' G B 10 48.929 29.459 52.091 1.00 78.83 O
ATOM 9 C3' G B 10 47.601 31.282 51.580 1.00 76.25 C
ATOM 10 O3' G B 10 46.285 31.781 51.485 1.00 73.27 O
ATOM 11 C2' G B 10 48.298 31.556 52.911 1.00 76.66 C
ATOM 12 O2' G B 10 47.462 31.209 53.994 1.00 77.78 O
ATOM 13 C1' G B 10 49.437 30.542 52.869 1.00 77.63 C
ATOM 14 N9 G B 10 50.704 30.974 52.271 1.00 77.64 N
ATOM 15 C8 G B 10 51.138 30.635 51.013 1.00 77.70 C
ATOM 16 N7 G B 10 52.304 31.143 50.710 1.00 78.03 N
ATOM 17 C5 G B 10 52.677 31.865 51.825 1.00 77.63 C
ATOM 18 C6 G B 10 53.852 32.625 52.069 1.00 78.59 C
ATOM 19 O6 G B 10 54.822 32.815 51.329 1.00 78.37 O
ATOM 20 N1 G B 10 53.859 33.216 53.329 1.00 78.54 N
ATOM 21 C2 G B 10 52.843 33.070 54.234 1.00 77.58 C
ATOM 22 N2 G B 10 53.026 33.703 55.390 1.00 77.39 N
ATOM 23 N3 G B 10 51.741 32.357 54.019 1.00 77.84 N
ATOM 24 C4 G B 10 51.708 31.772 52.799 1.00 77.34 C
ATOM 25 P A B 11 46.062 33.231 50.878 1.00 74.19 P
ATOM 26 OP1 A B 11 44.640 33.728 50.964 1.00 73.85 O
ATOM 27 OP2 A B 11 46.748 33.247 49.569 1.00 73.80 O
ATOM 28 O5' A B 11 46.936 34.089 51.899 1.00 73.67 O
TER

Atoms:
OP1: (45.713,31.099,34.892)
OP2: (46.095,29.719,37.018)
C3': (49.359,33.742,37.056)
C1': (48.731,33.190,39.292)
C5': (46.900,33.417,36.426)
O4': (47.654,33.883,38.717)
C8: (47.845,30.870,39.965)
O2': (50.902,32.538,38.558)
C6: (47.927,30.906,43.493)
C5: (47.946,31.016,42.085)
C4: (48.390,32.232,41.600)
P: (45.813,31.029,36.374)
C4': (47.915,34.151,37.301)
C2': (49.567,32.658,38.115)
C2: (48.758,33.075,43.608)
N1: (48.344,31.963,44.217)
N3: (48.815,33.305,42.308)
N6: (47.543,29.825,44.169)
N7: (47.608,30.157,41.046)
N9: (48.315,32.136,40.233)
O5': (46.884,32.093,36.888)
O3': (50.178,34.866,37.264)
OP1: (47.745,27.311,47.994)
OP2: (47.755,29.717,47.112)
C3': (47.601,31.282,51.580)
C1': (49.437,30.542,52.869)
C5': (47.214,29.082,50.345)
O6: (54.822,32.815,51.329)
O4': (48.929,29.459,52.091)
C8: (51.138,30.635,51.013)
C2: (52.843,33.070,54.234)
C6: (53.852,32.625,52.069)
C5: (52.677,31.865,51.825)
C4: (51.708,31.772,52.799)
P: (48.341,28.657,47.977)
C4': (47.568,29.767,51.654)
C2': (48.298,31.556,52.911)
O2': (47.462,31.209,53.994)
N1: (53.859,33.216,53.329)
N2: (53.026,33.703,55.390)
N3: (51.741,32.357,54.019)
N7: (52.304,31.143,50.710)
N9: (50.704,30.974,52.271)
O5': (48.350,29.179,49.484)
O3': (46.285,31.781,51.485)
Image (generated by PyMOL):
PyMOL image
show in jmol