ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A343:A307

Extra

PDB:
ATOM 1 O3' C A 342 140.289 58.094 4.782 1.00 47.46 O
ATOM 2 P A A 343 141.752 58.661 4.483 1.00 44.87 P
ATOM 3 OP1 A A 343 142.207 58.017 3.224 1.00 41.96 O
ATOM 4 OP2 A A 343 142.615 58.597 5.688 1.00 41.96 O
ATOM 5 O5' A A 343 141.449 60.205 4.271 1.00 44.87 O
ATOM 6 C5' A A 343 140.934 60.679 3.049 1.00 44.87 C
ATOM 7 C4' A A 343 139.586 61.333 3.238 1.00 44.87 C
ATOM 8 O4' A A 343 139.541 62.229 2.106 1.00 44.87 O
ATOM 9 C3' A A 343 138.383 60.393 3.092 1.00 44.87 C
ATOM 10 O3' A A 343 137.532 60.388 4.239 1.00 44.87 O
ATOM 11 C2' A A 343 137.584 60.970 1.921 1.00 44.87 C
ATOM 12 O2' A A 343 136.624 61.918 2.326 1.00 44.87 O
ATOM 13 C1' A A 343 138.646 61.734 1.143 1.00 44.87 C
ATOM 14 N9 A A 343 139.386 60.947 0.148 1.00 41.96 N
ATOM 15 C8 A A 343 140.662 60.450 0.188 1.00 41.96 C
ATOM 16 N7 A A 343 140.997 59.771 -0.876 1.00 41.96 N
ATOM 17 C5 A A 343 139.866 59.831 -1.677 1.00 41.96 C
ATOM 18 C6 A A 343 139.570 59.309 -2.954 1.00 41.96 C
ATOM 19 N6 A A 343 140.433 58.601 -3.693 1.00 41.96 N
ATOM 20 N1 A A 343 138.340 59.549 -3.460 1.00 41.96 N
ATOM 21 C2 A A 343 137.484 60.270 -2.735 1.00 41.96 C
ATOM 22 N3 A A 343 137.646 60.812 -1.537 1.00 41.96 N
ATOM 23 C4 A A 343 138.871 60.552 -1.058 1.00 41.96 C
ATOM 24 P G A 344 136.333 59.298 4.359 1.00 36.66 P
ATOM 25 OP1 G A 344 136.976 58.011 4.684 1.00 39.30 O
ATOM 26 OP2 G A 344 135.407 59.371 3.191 1.00 39.30 O
ATOM 27 O5' G A 344 135.565 59.690 5.701 1.00 36.66 O
TER

ATOM 1 O3' G B 306 140.874 55.654 -5.181 1.00 50.69 O
ATOM 2 P G B 307 140.127 56.061 -6.541 1.00 53.86 P
ATOM 3 OP1 G B 307 140.206 57.545 -6.651 1.00 50.37 O
ATOM 4 OP2 G B 307 138.799 55.384 -6.595 1.00 50.37 O
ATOM 5 O5' G B 307 141.035 55.415 -7.672 1.00 53.86 O
ATOM 6 C5' G B 307 142.214 56.083 -8.144 1.00 53.86 C
ATOM 7 C4' G B 307 142.659 55.480 -9.455 1.00 53.86 C
ATOM 8 O4' G B 307 143.152 54.127 -9.237 1.00 53.86 O
ATOM 9 C3' G B 307 141.554 55.315 -10.481 1.00 53.86 C
ATOM 10 O3' G B 307 141.297 56.491 -11.220 1.00 53.86 O
ATOM 11 C2' G B 307 142.087 54.191 -11.352 1.00 53.86 C
ATOM 12 O2' G B 307 143.054 54.675 -12.257 1.00 53.86 O
ATOM 13 C1' G B 307 142.755 53.291 -10.313 1.00 53.86 C
ATOM 14 N9 G B 307 141.806 52.307 -9.798 1.00 50.37 N
ATOM 15 C8 G B 307 141.144 52.353 -8.593 1.00 50.37 C
ATOM 16 N7 G B 307 140.307 51.365 -8.427 1.00 50.37 N
ATOM 17 C5 G B 307 140.432 50.609 -9.584 1.00 50.37 C
ATOM 18 C6 G B 307 139.764 49.425 -9.979 1.00 50.37 C
ATOM 19 O6 G B 307 138.894 48.792 -9.374 1.00 50.37 O
ATOM 20 N1 G B 307 140.190 48.990 -11.221 1.00 50.37 N
ATOM 21 C2 G B 307 141.128 49.614 -11.995 1.00 50.37 C
ATOM 22 N2 G B 307 141.387 49.031 -13.167 1.00 50.37 N
ATOM 23 N3 G B 307 141.760 50.726 -11.648 1.00 50.37 N
ATOM 24 C4 G B 307 141.363 51.166 -10.437 1.00 50.37 C
ATOM 25 P G B 308 139.842 56.702 -11.869 1.00 57.92 P
ATOM 26 OP1 G B 308 139.901 57.915 -12.739 1.00 58.48 O
ATOM 27 OP2 G B 308 138.824 56.626 -10.776 1.00 58.48 O
ATOM 28 O5' G B 308 139.647 55.435 -12.820 1.00 57.92 O
TER

Atoms:
OP1: (142.207,58.017,3.224)
OP2: (142.615,58.597,5.688)
C3': (138.383,60.393,3.092)
C1': (138.646,61.734,1.143)
C5': (140.934,60.679,3.049)
O4': (139.541,62.229,2.106)
C8: (140.662,60.450,0.188)
O2': (136.624,61.918,2.326)
C6: (139.570,59.309,-2.954)
C5: (139.866,59.831,-1.677)
C4: (138.871,60.552,-1.058)
P: (141.752,58.661,4.483)
C4': (139.586,61.333,3.238)
C2': (137.584,60.970,1.921)
C2: (137.484,60.270,-2.735)
N1: (138.340,59.549,-3.460)
N3: (137.646,60.812,-1.537)
N6: (140.433,58.601,-3.693)
N7: (140.997,59.771,-0.876)
N9: (139.386,60.947,0.148)
O5': (141.449,60.205,4.271)
O3': (137.532,60.388,4.239)
OP1: (140.206,57.545,-6.651)
OP2: (138.799,55.384,-6.595)
C3': (141.554,55.315,-10.481)
C1': (142.755,53.291,-10.313)
C5': (142.214,56.083,-8.144)
O6: (138.894,48.792,-9.374)
O4': (143.152,54.127,-9.237)
C8: (141.144,52.353,-8.593)
C2: (141.128,49.614,-11.995)
C6: (139.764,49.425,-9.979)
C5: (140.432,50.609,-9.584)
C4: (141.363,51.166,-10.437)
P: (140.127,56.061,-6.541)
C4': (142.659,55.480,-9.455)
C2': (142.087,54.191,-11.352)
O2': (143.054,54.675,-12.257)
N1: (140.190,48.990,-11.221)
N2: (141.387,49.031,-13.167)
N3: (141.760,50.726,-11.648)
N7: (140.307,51.365,-8.427)
N9: (141.806,52.307,-9.798)
O5': (141.035,55.415,-7.672)
O3': (141.297,56.491,-11.220)
Image (generated by PyMOL):
PyMOL image
show in jmol