ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A587:A283

Extra

PDB:
ATOM 1 O3' A A 586 120.587 85.871 7.281 1.00 53.60 O
ATOM 2 P A A 587 121.595 86.913 7.967 1.00 51.20 P
ATOM 3 OP1 A A 587 121.158 87.056 9.365 1.00 46.10 O
ATOM 4 OP2 A A 587 121.688 88.113 7.109 1.00 46.10 O
ATOM 5 O5' A A 587 123.015 86.194 7.992 1.00 51.20 O
ATOM 6 C5' A A 587 123.341 85.239 9.013 1.00 51.20 C
ATOM 7 C4' A A 587 124.756 84.734 8.835 1.00 51.20 C
ATOM 8 O4' A A 587 124.902 84.124 7.527 1.00 51.20 O
ATOM 9 C3' A A 587 125.834 85.793 8.858 1.00 51.20 C
ATOM 10 O3' A A 587 126.202 86.139 10.175 1.00 51.20 O
ATOM 11 C2' A A 587 126.961 85.126 8.093 1.00 51.20 C
ATOM 12 O2' A A 587 127.633 84.179 8.890 1.00 51.20 O
ATOM 13 C1' A A 587 126.190 84.390 7.007 1.00 51.20 C
ATOM 14 N9 A A 587 126.035 85.227 5.821 1.00 46.10 N
ATOM 15 C8 A A 587 124.905 85.862 5.378 1.00 46.10 C
ATOM 16 N7 A A 587 125.089 86.572 4.296 1.00 46.10 N
ATOM 17 C5 A A 587 126.431 86.383 3.998 1.00 46.10 C
ATOM 18 C6 A A 587 127.253 86.875 2.965 1.00 46.10 C
ATOM 19 N6 A A 587 126.827 87.702 2.008 1.00 46.10 N
ATOM 20 N1 A A 587 128.544 86.494 2.953 1.00 46.10 N
ATOM 21 C2 A A 587 128.976 85.687 3.923 1.00 46.10 C
ATOM 22 N3 A A 587 128.306 85.165 4.953 1.00 46.10 N
ATOM 23 C4 A A 587 127.023 85.555 4.927 1.00 46.10 C
ATOM 24 P G A 588 126.458 87.685 10.529 1.00 59.83 P
ATOM 25 OP1 G A 588 126.957 87.777 11.931 1.00 56.33 O
ATOM 26 OP2 G A 588 125.245 88.454 10.119 1.00 56.33 O
ATOM 27 O5' G A 588 127.659 88.065 9.563 1.00 59.83 O
TER

ATOM 1 O3' G B 282 128.275 87.682 -1.954 1.00 41.34 O
ATOM 2 P G B 283 129.085 88.957 -1.403 1.00 38.63 P
ATOM 3 OP1 G B 283 128.091 90.070 -1.339 1.00 37.75 O
ATOM 4 OP2 G B 283 130.336 89.132 -2.199 1.00 37.75 O
ATOM 5 O5' G B 283 129.474 88.541 0.081 1.00 38.63 O
ATOM 6 C5' G B 283 130.717 88.922 0.651 1.00 38.63 C
ATOM 7 C4' G B 283 131.382 87.712 1.240 1.00 38.63 C
ATOM 8 O4' G B 283 131.566 86.730 0.195 1.00 38.63 O
ATOM 9 C3' G B 283 132.768 87.961 1.789 1.00 38.63 C
ATOM 10 O3' G B 283 132.682 88.411 3.119 1.00 38.63 O
ATOM 11 C2' G B 283 133.433 86.604 1.651 1.00 38.63 C
ATOM 12 O2' G B 283 133.052 85.719 2.677 1.00 38.63 O
ATOM 13 C1' G B 283 132.832 86.108 0.338 1.00 38.63 C
ATOM 14 N9 G B 283 133.636 86.469 -0.828 1.00 37.75 N
ATOM 15 C8 G B 283 133.226 87.206 -1.915 1.00 37.75 C
ATOM 16 N7 G B 283 134.168 87.386 -2.797 1.00 37.75 N
ATOM 17 C5 G B 283 135.268 86.723 -2.268 1.00 37.75 C
ATOM 18 C6 G B 283 136.573 86.556 -2.785 1.00 37.75 C
ATOM 19 O6 G B 283 137.037 86.962 -3.860 1.00 37.75 O
ATOM 20 N1 G B 283 137.367 85.818 -1.926 1.00 37.75 N
ATOM 21 C2 G B 283 136.961 85.288 -0.730 1.00 37.75 C
ATOM 22 N2 G B 283 137.875 84.595 -0.044 1.00 37.75 N
ATOM 23 N3 G B 283 135.748 85.424 -0.241 1.00 37.75 N
ATOM 24 C4 G B 283 134.957 86.150 -1.055 1.00 37.75 C
ATOM 25 P U B 284 133.561 89.667 3.579 1.00 44.78 P
ATOM 26 OP1 U B 284 133.184 90.049 4.957 1.00 39.97 O
ATOM 27 OP2 U B 284 133.469 90.685 2.493 1.00 39.97 O
ATOM 28 O5' U B 284 135.025 89.041 3.646 1.00 44.78 O
TER

Atoms:
OP1: (121.158,87.056,9.365)
OP2: (121.688,88.113,7.109)
C3': (125.834,85.793,8.858)
C1': (126.190,84.390,7.007)
C5': (123.341,85.239,9.013)
O4': (124.902,84.124,7.527)
C8: (124.905,85.862,5.378)
O2': (127.633,84.179,8.890)
C6: (127.253,86.875,2.965)
C5: (126.431,86.383,3.998)
C4: (127.023,85.555,4.927)
P: (121.595,86.913,7.967)
C4': (124.756,84.734,8.835)
C2': (126.961,85.126,8.093)
C2: (128.976,85.687,3.923)
N1: (128.544,86.494,2.953)
N3: (128.306,85.165,4.953)
N6: (126.827,87.702,2.008)
N7: (125.089,86.572,4.296)
N9: (126.035,85.227,5.821)
O5': (123.015,86.194,7.992)
O3': (126.202,86.139,10.175)
OP1: (128.091,90.070,-1.339)
OP2: (130.336,89.132,-2.199)
C3': (132.768,87.961,1.789)
C1': (132.832,86.108,0.338)
C5': (130.717,88.922,0.651)
O6: (137.037,86.962,-3.860)
O4': (131.566,86.730,0.195)
C8: (133.226,87.206,-1.915)
C2: (136.961,85.288,-0.730)
C6: (136.573,86.556,-2.785)
C5: (135.268,86.723,-2.268)
C4: (134.957,86.150,-1.055)
P: (129.085,88.957,-1.403)
C4': (131.382,87.712,1.240)
C2': (133.433,86.604,1.651)
O2': (133.052,85.719,2.677)
N1: (137.367,85.818,-1.926)
N2: (137.875,84.595,-0.044)
N3: (135.748,85.424,-0.241)
N7: (134.168,87.386,-2.797)
N9: (133.636,86.469,-0.828)
O5': (129.474,88.541,0.081)
O3': (132.682,88.411,3.119)
Image (generated by PyMOL):
PyMOL image
show in jmol