ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Y39:D26:D38

Extra

PDB:
ATOM 1 O3' A A 25 112.619 65.372 18.855 1.00 73.84 O
ATOM 2 P A A 26 112.203 66.887 18.487 1.00 74.57 P
ATOM 3 OP1 A A 26 111.397 67.428 19.610 1.00 75.07 O
ATOM 4 OP2 A A 26 111.654 66.928 17.102 1.00 74.25 O
ATOM 5 O5' A A 26 113.596 67.646 18.508 1.00 73.20 O
ATOM 6 C5' A A 26 113.790 68.856 17.811 1.00 71.05 C
ATOM 7 C4' A A 26 115.245 69.197 17.850 1.00 70.56 C
ATOM 8 O4' A A 26 115.984 68.121 17.226 1.00 70.27 O
ATOM 9 C3' A A 26 115.666 70.437 17.097 1.00 70.94 C
ATOM 10 O3' A A 26 115.495 71.570 17.938 1.00 70.72 O
ATOM 11 C2' A A 26 117.142 70.154 16.849 1.00 70.12 C
ATOM 12 O2' A A 26 117.918 70.415 17.996 1.00 69.68 O
ATOM 13 C1' A A 26 117.120 68.647 16.573 1.00 69.57 C
ATOM 14 N9 A A 26 117.007 68.334 15.152 1.00 69.54 N
ATOM 15 C8 A A 26 115.909 67.881 14.468 1.00 68.95 C
ATOM 16 N7 A A 26 116.113 67.731 13.181 1.00 68.90 N
ATOM 17 C5 A A 26 117.441 68.102 13.008 1.00 69.03 C
ATOM 18 C6 A A 26 118.267 68.174 11.872 1.00 68.30 C
ATOM 19 N6 A A 26 117.867 67.870 10.634 1.00 67.63 N
ATOM 20 N1 A A 26 119.539 68.580 12.052 1.00 68.56 N
ATOM 21 C2 A A 26 119.947 68.894 13.285 1.00 68.20 C
ATOM 22 N3 A A 26 119.271 68.873 14.424 1.00 68.72 N
ATOM 23 C4 A A 26 118.007 68.463 14.216 1.00 69.55 C
ATOM 24 P U A 27 114.903 72.928 17.331 1.00 70.63 P
ATOM 25 OP1 U A 27 114.996 73.952 18.412 1.00 71.91 O
ATOM 26 OP2 U A 27 113.591 72.631 16.701 1.00 69.65 O
ATOM 27 O5' U A 27 115.920 73.311 16.165 1.00 71.69 O
TER

ATOM 1 O3' A B 37 121.251 70.249 8.013 1.00 51.73 O
ATOM 2 P G B 38 120.235 69.177 7.399 1.00 53.41 P
ATOM 3 OP1 G B 38 118.993 69.214 8.212 1.00 54.88 O
ATOM 4 OP2 G B 38 120.978 67.895 7.251 1.00 53.19 O
ATOM 5 O5' G B 38 119.883 69.764 5.962 1.00 53.61 O
ATOM 6 C5' G B 38 118.843 70.722 5.810 1.00 56.48 C
ATOM 7 C4' G B 38 118.694 71.117 4.359 1.00 58.93 C
ATOM 8 O4' G B 38 119.874 71.843 3.928 1.00 59.92 O
ATOM 9 C3' G B 38 118.523 69.968 3.375 1.00 60.14 C
ATOM 10 O3' G B 38 117.785 70.425 2.254 1.00 62.23 O
ATOM 11 C2' G B 38 119.948 69.715 2.913 1.00 60.28 C
ATOM 12 O2' G B 38 119.973 69.172 1.611 1.00 61.63 O
ATOM 13 C1' G B 38 120.510 71.137 2.880 1.00 59.88 C
ATOM 14 N9 G B 38 121.945 71.195 3.124 1.00 58.00 N
ATOM 15 C8 G B 38 122.559 71.362 4.337 1.00 57.70 C
ATOM 16 N7 G B 38 123.859 71.394 4.254 1.00 58.25 N
ATOM 17 C5 G B 38 124.118 71.236 2.902 1.00 58.41 C
ATOM 18 C6 G B 38 125.349 71.209 2.207 1.00 57.86 C
ATOM 19 O6 G B 38 126.489 71.325 2.665 1.00 58.70 O
ATOM 20 N1 G B 38 125.160 71.034 0.841 1.00 57.62 N
ATOM 21 C2 G B 38 123.939 70.906 0.223 1.00 58.62 C
ATOM 22 N2 G B 38 123.963 70.756 -1.110 1.00 59.05 N
ATOM 23 N3 G B 38 122.778 70.928 0.865 1.00 58.79 N
ATOM 24 C4 G B 38 122.944 71.101 2.192 1.00 58.35 C
ATOM 25 P U B 39 116.190 70.590 2.351 1.00 64.60 P
ATOM 26 OP1 U B 39 115.943 72.052 2.486 1.00 64.25 O
ATOM 27 OP2 U B 39 115.639 69.651 3.373 1.00 62.95 O
ATOM 28 O5' U B 39 115.693 70.125 0.912 1.00 64.73 O
TER

Atoms:
OP1: (111.397,67.428,19.610)
OP2: (111.654,66.928,17.102)
C3': (115.666,70.437,17.097)
C1': (117.120,68.647,16.573)
C5': (113.790,68.856,17.811)
O4': (115.984,68.121,17.226)
C8: (115.909,67.881,14.468)
O2': (117.918,70.415,17.996)
C6: (118.267,68.174,11.872)
C5: (117.441,68.102,13.008)
C4: (118.007,68.463,14.216)
P: (112.203,66.887,18.487)
C4': (115.245,69.197,17.850)
C2': (117.142,70.154,16.849)
C2: (119.947,68.894,13.285)
N1: (119.539,68.580,12.052)
N3: (119.271,68.873,14.424)
N6: (117.867,67.870,10.634)
N7: (116.113,67.731,13.181)
N9: (117.007,68.334,15.152)
O5': (113.596,67.646,18.508)
O3': (115.495,71.570,17.938)
OP1: (118.993,69.214,8.212)
OP2: (120.978,67.895,7.251)
C3': (118.523,69.968,3.375)
C1': (120.510,71.137,2.880)
C5': (118.843,70.722,5.810)
O6: (126.489,71.325,2.665)
O4': (119.874,71.843,3.928)
C8: (122.559,71.362,4.337)
C2: (123.939,70.906,0.223)
C6: (125.349,71.209,2.207)
C5: (124.118,71.236,2.902)
C4: (122.944,71.101,2.192)
P: (120.235,69.177,7.399)
C4': (118.694,71.117,4.359)
C2': (119.948,69.715,2.913)
O2': (119.973,69.172,1.611)
N1: (125.160,71.034,0.841)
N2: (123.963,70.756,-1.110)
N3: (122.778,70.928,0.865)
N7: (123.859,71.394,4.254)
N9: (121.945,71.195,3.124)
O5': (119.883,69.764,5.962)
O3': (117.785,70.425,2.254)
Image (generated by PyMOL):
PyMOL image
show in jmol