ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QRS:B11:B42

Extra

PDB:
ATOM 1 O3' C A 10 29.315 23.139 24.598 1.00 12.67 O
ATOM 2 P A A 11 28.754 24.626 24.754 1.00 10.53 P
ATOM 3 OP1 A A 11 29.619 25.584 24.047 1.00 11.54 O
ATOM 4 OP2 A A 11 28.484 24.822 26.194 1.00 12.26 O
ATOM 5 O5' A A 11 27.343 24.577 24.024 1.00 14.92 O
ATOM 6 C5' A A 11 27.199 23.986 22.739 1.00 18.61 C
ATOM 7 C4' A A 11 25.735 23.839 22.405 1.00 22.29 C
ATOM 8 O4' A A 11 25.142 22.814 23.243 1.00 24.57 O
ATOM 9 C3' A A 11 24.877 25.071 22.650 1.00 23.07 C
ATOM 10 O3' A A 11 24.966 25.924 21.516 1.00 22.52 O
ATOM 11 C2' A A 11 23.487 24.456 22.803 1.00 24.57 C
ATOM 12 O2' A A 11 22.936 24.085 21.558 1.00 25.38 O
ATOM 13 C1' A A 11 23.801 23.161 23.552 1.00 24.86 C
ATOM 14 N9 A A 11 23.662 23.231 25.009 1.00 26.68 N
ATOM 15 C8 A A 11 24.660 23.363 25.937 1.00 27.08 C
ATOM 16 N7 A A 11 24.232 23.396 27.173 1.00 27.77 N
ATOM 17 C5 A A 11 22.857 23.283 27.053 1.00 28.89 C
ATOM 18 C6 A A 11 21.822 23.266 28.004 1.00 29.74 C
ATOM 19 N6 A A 11 22.014 23.401 29.319 1.00 30.59 N
ATOM 20 N1 A A 11 20.560 23.116 27.553 1.00 31.03 N
ATOM 21 C2 A A 11 20.360 23.009 26.240 1.00 30.06 C
ATOM 22 N3 A A 11 21.244 23.029 25.250 1.00 30.60 N
ATOM 23 C4 A A 11 22.492 23.171 25.727 1.00 28.49 C
ATOM 24 P A A 12 24.375 27.414 21.570 1.00 23.18 P
ATOM 25 OP1 A A 12 24.766 28.101 20.323 1.00 24.80 O
ATOM 26 OP2 A A 12 24.739 28.008 22.870 1.00 27.21 O
ATOM 27 O5' A A 12 22.789 27.231 21.535 1.00 25.43 O
TER

ATOM 1 O3' C B 41 14.677 15.047 33.901 1.00 85.91 O
ATOM 2 P A B 42 13.636 16.275 33.863 1.00 86.79 P
ATOM 3 OP1 A B 42 12.696 16.092 35.003 1.00 86.74 O
ATOM 4 OP2 A B 42 13.101 16.382 32.476 1.00 87.02 O
ATOM 5 O5' A B 42 14.516 17.575 34.155 1.00 84.83 O
ATOM 6 C5' A B 42 14.826 17.972 35.492 1.00 81.82 C
ATOM 7 C4' A B 42 15.110 19.460 35.552 1.00 79.85 C
ATOM 8 O4' A B 42 16.068 19.776 34.517 1.00 76.74 O
ATOM 9 C3' A B 42 13.951 20.405 35.249 1.00 80.02 C
ATOM 10 O3' A B 42 13.166 20.768 36.399 1.00 84.60 O
ATOM 11 C2' A B 42 14.668 21.683 34.811 1.00 77.36 C
ATOM 12 O2' A B 42 14.949 22.537 35.901 1.00 77.23 O
ATOM 13 C1' A B 42 15.979 21.152 34.225 1.00 74.45 C
ATOM 14 N9 A B 42 16.152 21.367 32.792 1.00 69.39 N
ATOM 15 C8 A B 42 15.223 21.304 31.790 1.00 67.82 C
ATOM 16 N7 A B 42 15.700 21.611 30.608 1.00 66.59 N
ATOM 17 C5 A B 42 17.040 21.878 30.849 1.00 65.85 C
ATOM 18 C6 A B 42 18.100 22.261 30.005 1.00 64.27 C
ATOM 19 N6 A B 42 17.972 22.463 28.695 1.00 62.87 N
ATOM 20 N1 A B 42 19.313 22.437 30.564 1.00 64.15 N
ATOM 21 C2 A B 42 19.444 22.245 31.880 1.00 64.96 C
ATOM 22 N3 A B 42 18.527 21.893 32.776 1.00 65.75 N
ATOM 23 C4 A B 42 17.333 21.722 32.188 1.00 66.85 C
ATOM 24 P U B 43 13.632 20.337 37.886 1.00 87.36 P
ATOM 25 OP1 U B 43 14.876 21.079 38.238 1.00 86.10 O
ATOM 26 OP2 U B 43 13.614 18.855 37.977 1.00 86.89 O
ATOM 27 O5' U B 43 12.467 20.888 38.824 1.00 89.63 O
TER

Atoms:
OP1: (29.619,25.584,24.047)
OP2: (28.484,24.822,26.194)
C3': (24.877,25.071,22.650)
C1': (23.801,23.161,23.552)
C5': (27.199,23.986,22.739)
O4': (25.142,22.814,23.243)
C8: (24.660,23.363,25.937)
O2': (22.936,24.085,21.558)
C6: (21.822,23.266,28.004)
C5: (22.857,23.283,27.053)
C4: (22.492,23.171,25.727)
P: (28.754,24.626,24.754)
C4': (25.735,23.839,22.405)
C2': (23.487,24.456,22.803)
C2: (20.360,23.009,26.240)
N1: (20.560,23.116,27.553)
N3: (21.244,23.029,25.250)
N6: (22.014,23.401,29.319)
N7: (24.232,23.396,27.173)
N9: (23.662,23.231,25.009)
O5': (27.343,24.577,24.024)
O3': (24.966,25.924,21.516)
OP1: (12.696,16.092,35.003)
OP2: (13.101,16.382,32.476)
C3': (13.951,20.405,35.249)
C1': (15.979,21.152,34.225)
C5': (14.826,17.972,35.492)
O4': (16.068,19.776,34.517)
C8: (15.223,21.304,31.790)
O2': (14.949,22.537,35.901)
C6: (18.100,22.261,30.005)
C5: (17.040,21.878,30.849)
C4: (17.333,21.722,32.188)
P: (13.636,16.275,33.863)
C4': (15.110,19.460,35.552)
C2': (14.668,21.683,34.811)
C2: (19.444,22.245,31.880)
N1: (19.313,22.437,30.564)
N3: (18.527,21.893,32.776)
N6: (17.972,22.463,28.695)
N7: (15.700,21.611,30.608)
N9: (16.152,21.367,32.792)
O5': (14.516,17.575,34.155)
O3': (13.166,20.768,36.399)
Image (generated by PyMOL):
PyMOL image
show in jmol