Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01833:01813
Extra
PDB:
ATOM 1 O3' U A1832 122.194 133.132 61.983 1.00 37.67 O
ATOM 2 P A A1833 123.761 133.075 62.304 1.00 40.14 P
ATOM 3 OP1 A A1833 124.212 134.486 62.443 1.00 41.36 O
ATOM 4 OP2 A A1833 124.433 132.183 61.327 1.00 36.44 O
ATOM 5 O5' A A1833 123.818 132.389 63.736 1.00 38.67 O
ATOM 6 C5' A A1833 123.279 133.062 64.886 1.00 40.44 C
ATOM 7 C4' A A1833 123.144 132.096 66.036 1.00 41.13 C
ATOM 8 O4' A A1833 122.174 131.082 65.661 1.00 41.02 O
ATOM 9 C3' A A1833 124.422 131.349 66.409 1.00 42.25 C
ATOM 10 O3' A A1833 124.460 131.094 67.808 1.00 43.83 O
ATOM 11 C2' A A1833 124.276 130.043 65.639 1.00 40.87 C
ATOM 12 O2' A A1833 124.995 128.979 66.226 1.00 41.80 O
ATOM 13 C1' A A1833 122.769 129.806 65.733 1.00 40.42 C
ATOM 14 N9 A A1833 122.257 128.987 64.636 1.00 38.32 N
ATOM 15 C8 A A1833 121.798 129.377 63.400 1.00 37.10 C
ATOM 16 N7 A A1833 121.487 128.375 62.613 1.00 36.28 N
ATOM 17 C5 A A1833 121.741 127.253 63.388 1.00 35.88 C
ATOM 18 C6 A A1833 121.637 125.881 63.123 1.00 36.88 C
ATOM 19 N6 A A1833 121.247 125.377 61.946 1.00 37.01 N
ATOM 20 N1 A A1833 121.963 125.025 64.119 1.00 37.19 N
ATOM 21 C2 A A1833 122.375 125.528 65.291 1.00 37.23 C
ATOM 22 N3 A A1833 122.524 126.794 65.655 1.00 36.01 N
ATOM 23 C4 A A1833 122.190 127.616 64.645 1.00 36.65 C
ATOM 24 P C A1834 125.604 131.773 68.707 1.00 45.74 P
ATOM 25 OP1 C A1834 126.750 132.079 67.808 1.00 47.70 O
ATOM 26 OP2 C A1834 125.816 130.924 69.911 1.00 43.59 O
ATOM 27 O5' C A1834 124.970 133.158 69.177 1.00 45.17 O
TER
ATOM 1 O3' C B1812 119.374 121.258 60.650 1.00 42.27 O
ATOM 2 P G B1813 120.927 121.367 60.261 1.00 40.83 P
ATOM 3 OP1 G B1813 121.065 120.604 58.997 1.00 41.22 O
ATOM 4 OP2 G B1813 121.749 120.992 61.437 1.00 41.24 O
ATOM 5 O5' G B1813 121.153 122.917 59.967 1.00 41.26 O
ATOM 6 C5' G B1813 120.396 123.590 58.941 1.00 42.48 C
ATOM 7 C4' G B1813 121.317 124.355 58.017 1.00 41.73 C
ATOM 8 O4' G B1813 121.946 125.437 58.751 1.00 42.24 O
ATOM 9 C3' G B1813 122.456 123.549 57.394 1.00 43.24 C
ATOM 10 O3' G B1813 122.776 124.074 56.110 1.00 44.46 O
ATOM 11 C2' G B1813 123.615 123.857 58.332 1.00 43.31 C
ATOM 12 O2' G B1813 124.887 123.705 57.731 1.00 46.88 O
ATOM 13 C1' G B1813 123.347 125.328 58.628 1.00 40.77 C
ATOM 14 N9 G B1813 123.972 125.853 59.835 1.00 37.73 N
ATOM 15 C8 G B1813 124.683 125.161 60.780 1.00 36.25 C
ATOM 16 N7 G B1813 125.157 125.926 61.723 1.00 36.57 N
ATOM 17 C5 G B1813 124.728 127.197 61.381 1.00 36.87 C
ATOM 18 C6 G B1813 124.954 128.440 62.015 1.00 36.95 C
ATOM 19 O6 G B1813 125.621 128.676 63.030 1.00 36.97 O
ATOM 20 N1 G B1813 124.318 129.477 61.343 1.00 36.13 N
ATOM 21 C2 G B1813 123.571 129.337 60.202 1.00 37.19 C
ATOM 22 N2 G B1813 123.008 130.452 59.712 1.00 38.14 N
ATOM 23 N3 G B1813 123.380 128.187 59.587 1.00 38.43 N
ATOM 24 C4 G B1813 123.980 127.166 60.229 1.00 37.64 C
ATOM 25 P C B1814 121.783 123.821 54.875 1.00 47.72 P
ATOM 26 OP1 C B1814 121.174 122.473 55.036 1.00 47.35 O
ATOM 27 OP2 C B1814 122.488 124.156 53.617 1.00 48.36 O
ATOM 28 O5' C B1814 120.663 124.925 55.103 1.00 47.19 O
TER
ATOM 2 P A A1833 123.761 133.075 62.304 1.00 40.14 P
ATOM 3 OP1 A A1833 124.212 134.486 62.443 1.00 41.36 O
ATOM 4 OP2 A A1833 124.433 132.183 61.327 1.00 36.44 O
ATOM 5 O5' A A1833 123.818 132.389 63.736 1.00 38.67 O
ATOM 6 C5' A A1833 123.279 133.062 64.886 1.00 40.44 C
ATOM 7 C4' A A1833 123.144 132.096 66.036 1.00 41.13 C
ATOM 8 O4' A A1833 122.174 131.082 65.661 1.00 41.02 O
ATOM 9 C3' A A1833 124.422 131.349 66.409 1.00 42.25 C
ATOM 10 O3' A A1833 124.460 131.094 67.808 1.00 43.83 O
ATOM 11 C2' A A1833 124.276 130.043 65.639 1.00 40.87 C
ATOM 12 O2' A A1833 124.995 128.979 66.226 1.00 41.80 O
ATOM 13 C1' A A1833 122.769 129.806 65.733 1.00 40.42 C
ATOM 14 N9 A A1833 122.257 128.987 64.636 1.00 38.32 N
ATOM 15 C8 A A1833 121.798 129.377 63.400 1.00 37.10 C
ATOM 16 N7 A A1833 121.487 128.375 62.613 1.00 36.28 N
ATOM 17 C5 A A1833 121.741 127.253 63.388 1.00 35.88 C
ATOM 18 C6 A A1833 121.637 125.881 63.123 1.00 36.88 C
ATOM 19 N6 A A1833 121.247 125.377 61.946 1.00 37.01 N
ATOM 20 N1 A A1833 121.963 125.025 64.119 1.00 37.19 N
ATOM 21 C2 A A1833 122.375 125.528 65.291 1.00 37.23 C
ATOM 22 N3 A A1833 122.524 126.794 65.655 1.00 36.01 N
ATOM 23 C4 A A1833 122.190 127.616 64.645 1.00 36.65 C
ATOM 24 P C A1834 125.604 131.773 68.707 1.00 45.74 P
ATOM 25 OP1 C A1834 126.750 132.079 67.808 1.00 47.70 O
ATOM 26 OP2 C A1834 125.816 130.924 69.911 1.00 43.59 O
ATOM 27 O5' C A1834 124.970 133.158 69.177 1.00 45.17 O
TER
ATOM 1 O3' C B1812 119.374 121.258 60.650 1.00 42.27 O
ATOM 2 P G B1813 120.927 121.367 60.261 1.00 40.83 P
ATOM 3 OP1 G B1813 121.065 120.604 58.997 1.00 41.22 O
ATOM 4 OP2 G B1813 121.749 120.992 61.437 1.00 41.24 O
ATOM 5 O5' G B1813 121.153 122.917 59.967 1.00 41.26 O
ATOM 6 C5' G B1813 120.396 123.590 58.941 1.00 42.48 C
ATOM 7 C4' G B1813 121.317 124.355 58.017 1.00 41.73 C
ATOM 8 O4' G B1813 121.946 125.437 58.751 1.00 42.24 O
ATOM 9 C3' G B1813 122.456 123.549 57.394 1.00 43.24 C
ATOM 10 O3' G B1813 122.776 124.074 56.110 1.00 44.46 O
ATOM 11 C2' G B1813 123.615 123.857 58.332 1.00 43.31 C
ATOM 12 O2' G B1813 124.887 123.705 57.731 1.00 46.88 O
ATOM 13 C1' G B1813 123.347 125.328 58.628 1.00 40.77 C
ATOM 14 N9 G B1813 123.972 125.853 59.835 1.00 37.73 N
ATOM 15 C8 G B1813 124.683 125.161 60.780 1.00 36.25 C
ATOM 16 N7 G B1813 125.157 125.926 61.723 1.00 36.57 N
ATOM 17 C5 G B1813 124.728 127.197 61.381 1.00 36.87 C
ATOM 18 C6 G B1813 124.954 128.440 62.015 1.00 36.95 C
ATOM 19 O6 G B1813 125.621 128.676 63.030 1.00 36.97 O
ATOM 20 N1 G B1813 124.318 129.477 61.343 1.00 36.13 N
ATOM 21 C2 G B1813 123.571 129.337 60.202 1.00 37.19 C
ATOM 22 N2 G B1813 123.008 130.452 59.712 1.00 38.14 N
ATOM 23 N3 G B1813 123.380 128.187 59.587 1.00 38.43 N
ATOM 24 C4 G B1813 123.980 127.166 60.229 1.00 37.64 C
ATOM 25 P C B1814 121.783 123.821 54.875 1.00 47.72 P
ATOM 26 OP1 C B1814 121.174 122.473 55.036 1.00 47.35 O
ATOM 27 OP2 C B1814 122.488 124.156 53.617 1.00 48.36 O
ATOM 28 O5' C B1814 120.663 124.925 55.103 1.00 47.19 O
TER
Atoms:
OP1: (124.212,134.486,62.443)
OP2: (124.433,132.183,61.327)
C3': (124.422,131.349,66.409)
C1': (122.769,129.806,65.733)
C5': (123.279,133.062,64.886)
O4': (122.174,131.082,65.661)
C8: (121.798,129.377,63.400)
O2': (124.995,128.979,66.226)
C6: (121.637,125.881,63.123)
C5: (121.741,127.253,63.388)
C4: (122.190,127.616,64.645)
P: (123.761,133.075,62.304)
C4': (123.144,132.096,66.036)
C2': (124.276,130.043,65.639)
C2: (122.375,125.528,65.291)
N1: (121.963,125.025,64.119)
N3: (122.524,126.794,65.655)
N6: (121.247,125.377,61.946)
N7: (121.487,128.375,62.613)
N9: (122.257,128.987,64.636)
O5': (123.818,132.389,63.736)
O3': (124.460,131.094,67.808)
OP2: (124.433,132.183,61.327)
C3': (124.422,131.349,66.409)
C1': (122.769,129.806,65.733)
C5': (123.279,133.062,64.886)
O4': (122.174,131.082,65.661)
C8: (121.798,129.377,63.400)
O2': (124.995,128.979,66.226)
C6: (121.637,125.881,63.123)
C5: (121.741,127.253,63.388)
C4: (122.190,127.616,64.645)
P: (123.761,133.075,62.304)
C4': (123.144,132.096,66.036)
C2': (124.276,130.043,65.639)
C2: (122.375,125.528,65.291)
N1: (121.963,125.025,64.119)
N3: (122.524,126.794,65.655)
N6: (121.247,125.377,61.946)
N7: (121.487,128.375,62.613)
N9: (122.257,128.987,64.636)
O5': (123.818,132.389,63.736)
O3': (124.460,131.094,67.808)
OP1: (121.065,120.604,58.997)
OP2: (121.749,120.992,61.437)
C3': (122.456,123.549,57.394)
C1': (123.347,125.328,58.628)
C5': (120.396,123.590,58.941)
O6: (125.621,128.676,63.030)
O4': (121.946,125.437,58.751)
C8: (124.683,125.161,60.780)
C2: (123.571,129.337,60.202)
C6: (124.954,128.440,62.015)
C5: (124.728,127.197,61.381)
C4: (123.980,127.166,60.229)
P: (120.927,121.367,60.261)
C4': (121.317,124.355,58.017)
C2': (123.615,123.857,58.332)
O2': (124.887,123.705,57.731)
N1: (124.318,129.477,61.343)
N2: (123.008,130.452,59.712)
N3: (123.380,128.187,59.587)
N7: (125.157,125.926,61.723)
N9: (123.972,125.853,59.835)
O5': (121.153,122.917,59.967)
O3': (122.776,124.074,56.110)
OP2: (121.749,120.992,61.437)
C3': (122.456,123.549,57.394)
C1': (123.347,125.328,58.628)
C5': (120.396,123.590,58.941)
O6: (125.621,128.676,63.030)
O4': (121.946,125.437,58.751)
C8: (124.683,125.161,60.780)
C2: (123.571,129.337,60.202)
C6: (124.954,128.440,62.015)
C5: (124.728,127.197,61.381)
C4: (123.980,127.166,60.229)
P: (120.927,121.367,60.261)
C4': (121.317,124.355,58.017)
C2': (123.615,123.857,58.332)
O2': (124.887,123.705,57.731)
N1: (124.318,129.477,61.343)
N2: (123.008,130.452,59.712)
N3: (123.380,128.187,59.587)
N7: (125.157,125.926,61.723)
N9: (123.972,125.853,59.835)
O5': (121.153,122.917,59.967)
O3': (122.776,124.074,56.110)
Image (generated by PyMOL):