Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01833:01813
Extra
PDB:
ATOM 1 O3' U A1832 122.340 132.924 61.884 1.00 36.66 O
ATOM 2 P A A1833 123.912 132.861 62.201 1.00 38.56 P
ATOM 3 OP1 A A1833 124.366 134.267 62.335 1.00 39.26 O
ATOM 4 OP2 A A1833 124.586 131.959 61.232 1.00 37.14 O
ATOM 5 O5' A A1833 123.980 132.171 63.626 1.00 35.98 O
ATOM 6 C5' A A1833 123.433 132.826 64.774 1.00 38.63 C
ATOM 7 C4' A A1833 123.303 131.844 65.907 1.00 39.52 C
ATOM 8 O4' A A1833 122.323 130.839 65.529 1.00 38.85 O
ATOM 9 C3' A A1833 124.587 131.087 66.231 1.00 39.98 C
ATOM 10 O3' A A1833 124.658 130.805 67.620 1.00 42.11 O
ATOM 11 C2' A A1833 124.418 129.800 65.439 1.00 38.37 C
ATOM 12 O2' A A1833 125.149 128.724 65.979 1.00 41.51 O
ATOM 13 C1' A A1833 122.914 129.560 65.566 1.00 37.07 C
ATOM 14 N9 A A1833 122.390 128.763 64.456 1.00 34.14 N
ATOM 15 C8 A A1833 121.975 129.178 63.212 1.00 32.30 C
ATOM 16 N7 A A1833 121.670 128.193 62.401 1.00 31.31 N
ATOM 17 C5 A A1833 121.873 127.055 63.170 1.00 31.51 C
ATOM 18 C6 A A1833 121.753 125.686 62.882 1.00 31.44 C
ATOM 19 N6 A A1833 121.395 125.210 61.685 1.00 31.09 N
ATOM 20 N1 A A1833 122.023 124.810 63.876 1.00 30.67 N
ATOM 21 C2 A A1833 122.396 125.289 65.072 1.00 31.20 C
ATOM 22 N3 A A1833 122.558 126.550 65.461 1.00 30.90 N
ATOM 23 C4 A A1833 122.282 127.394 64.449 1.00 32.49 C
ATOM 24 P C A1834 125.764 131.538 68.518 1.00 44.88 P
ATOM 25 OP1 C A1834 126.909 131.846 67.626 1.00 46.38 O
ATOM 26 OP2 C A1834 125.978 130.712 69.741 1.00 42.96 O
ATOM 27 O5' C A1834 125.088 132.922 68.931 1.00 44.07 O
TER
ATOM 1 O3' C B1812 119.494 121.064 60.520 1.00 44.48 O
ATOM 2 P G B1813 121.057 121.208 60.170 1.00 43.19 P
ATOM 3 OP1 G B1813 121.282 120.429 58.930 1.00 42.96 O
ATOM 4 OP2 G B1813 121.843 120.896 61.386 1.00 42.53 O
ATOM 5 O5' G B1813 121.249 122.754 59.838 1.00 42.31 O
ATOM 6 C5' G B1813 120.497 123.381 58.780 1.00 40.67 C
ATOM 7 C4' G B1813 121.419 124.140 57.851 1.00 39.51 C
ATOM 8 O4' G B1813 122.042 125.234 58.573 1.00 38.71 O
ATOM 9 C3' G B1813 122.562 123.329 57.245 1.00 40.54 C
ATOM 10 O3' G B1813 122.872 123.826 55.953 1.00 42.37 O
ATOM 11 C2' G B1813 123.721 123.653 58.178 1.00 39.91 C
ATOM 12 O2' G B1813 124.998 123.529 57.584 1.00 42.39 O
ATOM 13 C1' G B1813 123.444 125.119 58.473 1.00 37.88 C
ATOM 14 N9 G B1813 124.057 125.608 59.701 1.00 36.12 N
ATOM 15 C8 G B1813 124.730 124.880 60.648 1.00 34.39 C
ATOM 16 N7 G B1813 125.221 125.616 61.604 1.00 35.62 N
ATOM 17 C5 G B1813 124.840 126.907 61.273 1.00 35.63 C
ATOM 18 C6 G B1813 125.101 128.137 61.924 1.00 36.18 C
ATOM 19 O6 G B1813 125.757 128.340 62.952 1.00 35.11 O
ATOM 20 N1 G B1813 124.516 129.204 61.252 1.00 36.43 N
ATOM 21 C2 G B1813 123.776 129.100 60.101 1.00 37.23 C
ATOM 22 N2 G B1813 123.274 130.238 59.612 1.00 39.16 N
ATOM 23 N3 G B1813 123.542 127.964 59.478 1.00 37.38 N
ATOM 24 C4 G B1813 124.101 126.915 60.114 1.00 36.37 C
ATOM 25 P C B1814 121.854 123.577 54.744 1.00 45.08 P
ATOM 26 OP1 C B1814 121.226 122.246 54.957 1.00 44.40 O
ATOM 27 OP2 C B1814 122.511 123.875 53.452 1.00 46.79 O
ATOM 28 O5' C B1814 120.767 124.709 54.978 1.00 45.42 O
TER
ATOM 2 P A A1833 123.912 132.861 62.201 1.00 38.56 P
ATOM 3 OP1 A A1833 124.366 134.267 62.335 1.00 39.26 O
ATOM 4 OP2 A A1833 124.586 131.959 61.232 1.00 37.14 O
ATOM 5 O5' A A1833 123.980 132.171 63.626 1.00 35.98 O
ATOM 6 C5' A A1833 123.433 132.826 64.774 1.00 38.63 C
ATOM 7 C4' A A1833 123.303 131.844 65.907 1.00 39.52 C
ATOM 8 O4' A A1833 122.323 130.839 65.529 1.00 38.85 O
ATOM 9 C3' A A1833 124.587 131.087 66.231 1.00 39.98 C
ATOM 10 O3' A A1833 124.658 130.805 67.620 1.00 42.11 O
ATOM 11 C2' A A1833 124.418 129.800 65.439 1.00 38.37 C
ATOM 12 O2' A A1833 125.149 128.724 65.979 1.00 41.51 O
ATOM 13 C1' A A1833 122.914 129.560 65.566 1.00 37.07 C
ATOM 14 N9 A A1833 122.390 128.763 64.456 1.00 34.14 N
ATOM 15 C8 A A1833 121.975 129.178 63.212 1.00 32.30 C
ATOM 16 N7 A A1833 121.670 128.193 62.401 1.00 31.31 N
ATOM 17 C5 A A1833 121.873 127.055 63.170 1.00 31.51 C
ATOM 18 C6 A A1833 121.753 125.686 62.882 1.00 31.44 C
ATOM 19 N6 A A1833 121.395 125.210 61.685 1.00 31.09 N
ATOM 20 N1 A A1833 122.023 124.810 63.876 1.00 30.67 N
ATOM 21 C2 A A1833 122.396 125.289 65.072 1.00 31.20 C
ATOM 22 N3 A A1833 122.558 126.550 65.461 1.00 30.90 N
ATOM 23 C4 A A1833 122.282 127.394 64.449 1.00 32.49 C
ATOM 24 P C A1834 125.764 131.538 68.518 1.00 44.88 P
ATOM 25 OP1 C A1834 126.909 131.846 67.626 1.00 46.38 O
ATOM 26 OP2 C A1834 125.978 130.712 69.741 1.00 42.96 O
ATOM 27 O5' C A1834 125.088 132.922 68.931 1.00 44.07 O
TER
ATOM 1 O3' C B1812 119.494 121.064 60.520 1.00 44.48 O
ATOM 2 P G B1813 121.057 121.208 60.170 1.00 43.19 P
ATOM 3 OP1 G B1813 121.282 120.429 58.930 1.00 42.96 O
ATOM 4 OP2 G B1813 121.843 120.896 61.386 1.00 42.53 O
ATOM 5 O5' G B1813 121.249 122.754 59.838 1.00 42.31 O
ATOM 6 C5' G B1813 120.497 123.381 58.780 1.00 40.67 C
ATOM 7 C4' G B1813 121.419 124.140 57.851 1.00 39.51 C
ATOM 8 O4' G B1813 122.042 125.234 58.573 1.00 38.71 O
ATOM 9 C3' G B1813 122.562 123.329 57.245 1.00 40.54 C
ATOM 10 O3' G B1813 122.872 123.826 55.953 1.00 42.37 O
ATOM 11 C2' G B1813 123.721 123.653 58.178 1.00 39.91 C
ATOM 12 O2' G B1813 124.998 123.529 57.584 1.00 42.39 O
ATOM 13 C1' G B1813 123.444 125.119 58.473 1.00 37.88 C
ATOM 14 N9 G B1813 124.057 125.608 59.701 1.00 36.12 N
ATOM 15 C8 G B1813 124.730 124.880 60.648 1.00 34.39 C
ATOM 16 N7 G B1813 125.221 125.616 61.604 1.00 35.62 N
ATOM 17 C5 G B1813 124.840 126.907 61.273 1.00 35.63 C
ATOM 18 C6 G B1813 125.101 128.137 61.924 1.00 36.18 C
ATOM 19 O6 G B1813 125.757 128.340 62.952 1.00 35.11 O
ATOM 20 N1 G B1813 124.516 129.204 61.252 1.00 36.43 N
ATOM 21 C2 G B1813 123.776 129.100 60.101 1.00 37.23 C
ATOM 22 N2 G B1813 123.274 130.238 59.612 1.00 39.16 N
ATOM 23 N3 G B1813 123.542 127.964 59.478 1.00 37.38 N
ATOM 24 C4 G B1813 124.101 126.915 60.114 1.00 36.37 C
ATOM 25 P C B1814 121.854 123.577 54.744 1.00 45.08 P
ATOM 26 OP1 C B1814 121.226 122.246 54.957 1.00 44.40 O
ATOM 27 OP2 C B1814 122.511 123.875 53.452 1.00 46.79 O
ATOM 28 O5' C B1814 120.767 124.709 54.978 1.00 45.42 O
TER
Atoms:
OP1: (124.366,134.267,62.335)
OP2: (124.586,131.959,61.232)
C3': (124.587,131.087,66.231)
C1': (122.914,129.560,65.566)
C5': (123.433,132.826,64.774)
O4': (122.323,130.839,65.529)
C8: (121.975,129.178,63.212)
O2': (125.149,128.724,65.979)
C6: (121.753,125.686,62.882)
C5: (121.873,127.055,63.170)
C4: (122.282,127.394,64.449)
P: (123.912,132.861,62.201)
C4': (123.303,131.844,65.907)
C2': (124.418,129.800,65.439)
C2: (122.396,125.289,65.072)
N1: (122.023,124.810,63.876)
N3: (122.558,126.550,65.461)
N6: (121.395,125.210,61.685)
N7: (121.670,128.193,62.401)
N9: (122.390,128.763,64.456)
O5': (123.980,132.171,63.626)
O3': (124.658,130.805,67.620)
OP2: (124.586,131.959,61.232)
C3': (124.587,131.087,66.231)
C1': (122.914,129.560,65.566)
C5': (123.433,132.826,64.774)
O4': (122.323,130.839,65.529)
C8: (121.975,129.178,63.212)
O2': (125.149,128.724,65.979)
C6: (121.753,125.686,62.882)
C5: (121.873,127.055,63.170)
C4: (122.282,127.394,64.449)
P: (123.912,132.861,62.201)
C4': (123.303,131.844,65.907)
C2': (124.418,129.800,65.439)
C2: (122.396,125.289,65.072)
N1: (122.023,124.810,63.876)
N3: (122.558,126.550,65.461)
N6: (121.395,125.210,61.685)
N7: (121.670,128.193,62.401)
N9: (122.390,128.763,64.456)
O5': (123.980,132.171,63.626)
O3': (124.658,130.805,67.620)
OP1: (121.282,120.429,58.930)
OP2: (121.843,120.896,61.386)
C3': (122.562,123.329,57.245)
C1': (123.444,125.119,58.473)
C5': (120.497,123.381,58.780)
O6: (125.757,128.340,62.952)
O4': (122.042,125.234,58.573)
C8: (124.730,124.880,60.648)
C2: (123.776,129.100,60.101)
C6: (125.101,128.137,61.924)
C5: (124.840,126.907,61.273)
C4: (124.101,126.915,60.114)
P: (121.057,121.208,60.170)
C4': (121.419,124.140,57.851)
C2': (123.721,123.653,58.178)
O2': (124.998,123.529,57.584)
N1: (124.516,129.204,61.252)
N2: (123.274,130.238,59.612)
N3: (123.542,127.964,59.478)
N7: (125.221,125.616,61.604)
N9: (124.057,125.608,59.701)
O5': (121.249,122.754,59.838)
O3': (122.872,123.826,55.953)
OP2: (121.843,120.896,61.386)
C3': (122.562,123.329,57.245)
C1': (123.444,125.119,58.473)
C5': (120.497,123.381,58.780)
O6: (125.757,128.340,62.952)
O4': (122.042,125.234,58.573)
C8: (124.730,124.880,60.648)
C2: (123.776,129.100,60.101)
C6: (125.101,128.137,61.924)
C5: (124.840,126.907,61.273)
C4: (124.101,126.915,60.114)
P: (121.057,121.208,60.170)
C4': (121.419,124.140,57.851)
C2': (123.721,123.653,58.178)
O2': (124.998,123.529,57.584)
N1: (124.516,129.204,61.252)
N2: (123.274,130.238,59.612)
N3: (123.542,127.964,59.478)
N7: (125.221,125.616,61.604)
N9: (124.057,125.608,59.701)
O5': (121.249,122.754,59.838)
O3': (122.872,123.826,55.953)
Image (generated by PyMOL):