Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01833:01813
Extra
PDB:
ATOM 1 O3' U A1832 122.584 133.335 62.308 1.00 48.21 O
ATOM 2 P A A1833 124.158 133.180 62.582 1.00 51.27 P
ATOM 3 OP1 A A1833 124.736 134.550 62.620 1.00 51.45 O
ATOM 4 OP2 A A1833 124.725 132.170 61.662 1.00 49.10 O
ATOM 5 O5' A A1833 124.237 132.574 64.046 1.00 48.52 O
ATOM 6 C5' A A1833 123.707 133.292 65.161 1.00 48.59 C
ATOM 7 C4' A A1833 123.533 132.359 66.324 1.00 50.15 C
ATOM 8 O4' A A1833 122.572 131.338 65.941 1.00 51.40 O
ATOM 9 C3' A A1833 124.798 131.610 66.716 1.00 51.65 C
ATOM 10 O3' A A1833 124.803 131.365 68.105 1.00 53.72 O
ATOM 11 C2' A A1833 124.666 130.297 65.959 1.00 50.45 C
ATOM 12 O2' A A1833 125.379 129.240 66.566 1.00 52.68 O
ATOM 13 C1' A A1833 123.163 130.060 66.043 1.00 49.32 C
ATOM 14 N9 A A1833 122.670 129.219 64.953 1.00 46.35 N
ATOM 15 C8 A A1833 122.230 129.581 63.703 1.00 45.21 C
ATOM 16 N7 A A1833 121.940 128.562 62.930 1.00 43.94 N
ATOM 17 C5 A A1833 122.188 127.458 63.733 1.00 42.64 C
ATOM 18 C6 A A1833 122.095 126.083 63.497 1.00 41.69 C
ATOM 19 N6 A A1833 121.736 125.554 62.323 1.00 42.48 N
ATOM 20 N1 A A1833 122.400 125.253 64.515 1.00 41.28 N
ATOM 21 C2 A A1833 122.788 125.782 65.682 1.00 42.54 C
ATOM 22 N3 A A1833 122.929 127.054 66.021 1.00 42.04 N
ATOM 23 C4 A A1833 122.610 127.850 64.989 1.00 43.83 C
ATOM 24 P C A1834 125.974 131.979 68.996 1.00 57.55 P
ATOM 25 OP1 C A1834 127.121 132.208 68.075 1.00 58.01 O
ATOM 26 OP2 C A1834 126.165 131.120 70.198 1.00 56.55 O
ATOM 27 O5' C A1834 125.377 133.388 69.452 1.00 55.99 O
TER
ATOM 1 O3' C B1812 119.684 121.536 60.932 1.00 51.32 O
ATOM 2 P G B1813 121.256 121.565 60.565 1.00 53.53 P
ATOM 3 OP1 G B1813 121.417 120.843 59.284 1.00 51.19 O
ATOM 4 OP2 G B1813 122.004 121.096 61.764 1.00 50.90 O
ATOM 5 O5' G B1813 121.565 123.107 60.293 1.00 50.84 O
ATOM 6 C5' G B1813 120.813 123.835 59.297 1.00 51.76 C
ATOM 7 C4' G B1813 121.740 124.543 58.335 1.00 51.55 C
ATOM 8 O4' G B1813 122.418 125.621 59.023 1.00 52.83 O
ATOM 9 C3' G B1813 122.841 123.694 57.711 1.00 53.22 C
ATOM 10 O3' G B1813 123.177 124.232 56.438 1.00 55.85 O
ATOM 11 C2' G B1813 124.011 123.958 58.646 1.00 52.04 C
ATOM 12 O2' G B1813 125.259 123.756 58.025 1.00 55.09 O
ATOM 13 C1' G B1813 123.813 125.442 58.920 1.00 50.27 C
ATOM 14 N9 G B1813 124.432 125.963 60.130 1.00 47.96 N
ATOM 15 C8 G B1813 125.128 125.272 61.087 1.00 48.04 C
ATOM 16 N7 G B1813 125.568 126.037 62.048 1.00 48.56 N
ATOM 17 C5 G B1813 125.136 127.307 61.703 1.00 48.76 C
ATOM 18 C6 G B1813 125.316 128.552 62.359 1.00 49.99 C
ATOM 19 O6 G B1813 125.926 128.792 63.409 1.00 51.74 O
ATOM 20 N1 G B1813 124.696 129.588 61.667 1.00 50.10 N
ATOM 21 C2 G B1813 123.995 129.445 60.496 1.00 49.96 C
ATOM 22 N2 G B1813 123.448 130.558 59.988 1.00 50.73 N
ATOM 23 N3 G B1813 123.835 128.296 59.871 1.00 50.25 N
ATOM 24 C4 G B1813 124.427 127.276 60.526 1.00 48.93 C
ATOM 25 P C B1814 122.177 124.036 55.200 1.00 59.80 P
ATOM 26 OP1 C B1814 121.588 122.671 55.306 1.00 58.47 O
ATOM 27 OP2 C B1814 122.880 124.434 53.949 1.00 58.96 O
ATOM 28 O5' C B1814 121.030 125.105 55.484 1.00 58.55 O
TER
ATOM 2 P A A1833 124.158 133.180 62.582 1.00 51.27 P
ATOM 3 OP1 A A1833 124.736 134.550 62.620 1.00 51.45 O
ATOM 4 OP2 A A1833 124.725 132.170 61.662 1.00 49.10 O
ATOM 5 O5' A A1833 124.237 132.574 64.046 1.00 48.52 O
ATOM 6 C5' A A1833 123.707 133.292 65.161 1.00 48.59 C
ATOM 7 C4' A A1833 123.533 132.359 66.324 1.00 50.15 C
ATOM 8 O4' A A1833 122.572 131.338 65.941 1.00 51.40 O
ATOM 9 C3' A A1833 124.798 131.610 66.716 1.00 51.65 C
ATOM 10 O3' A A1833 124.803 131.365 68.105 1.00 53.72 O
ATOM 11 C2' A A1833 124.666 130.297 65.959 1.00 50.45 C
ATOM 12 O2' A A1833 125.379 129.240 66.566 1.00 52.68 O
ATOM 13 C1' A A1833 123.163 130.060 66.043 1.00 49.32 C
ATOM 14 N9 A A1833 122.670 129.219 64.953 1.00 46.35 N
ATOM 15 C8 A A1833 122.230 129.581 63.703 1.00 45.21 C
ATOM 16 N7 A A1833 121.940 128.562 62.930 1.00 43.94 N
ATOM 17 C5 A A1833 122.188 127.458 63.733 1.00 42.64 C
ATOM 18 C6 A A1833 122.095 126.083 63.497 1.00 41.69 C
ATOM 19 N6 A A1833 121.736 125.554 62.323 1.00 42.48 N
ATOM 20 N1 A A1833 122.400 125.253 64.515 1.00 41.28 N
ATOM 21 C2 A A1833 122.788 125.782 65.682 1.00 42.54 C
ATOM 22 N3 A A1833 122.929 127.054 66.021 1.00 42.04 N
ATOM 23 C4 A A1833 122.610 127.850 64.989 1.00 43.83 C
ATOM 24 P C A1834 125.974 131.979 68.996 1.00 57.55 P
ATOM 25 OP1 C A1834 127.121 132.208 68.075 1.00 58.01 O
ATOM 26 OP2 C A1834 126.165 131.120 70.198 1.00 56.55 O
ATOM 27 O5' C A1834 125.377 133.388 69.452 1.00 55.99 O
TER
ATOM 1 O3' C B1812 119.684 121.536 60.932 1.00 51.32 O
ATOM 2 P G B1813 121.256 121.565 60.565 1.00 53.53 P
ATOM 3 OP1 G B1813 121.417 120.843 59.284 1.00 51.19 O
ATOM 4 OP2 G B1813 122.004 121.096 61.764 1.00 50.90 O
ATOM 5 O5' G B1813 121.565 123.107 60.293 1.00 50.84 O
ATOM 6 C5' G B1813 120.813 123.835 59.297 1.00 51.76 C
ATOM 7 C4' G B1813 121.740 124.543 58.335 1.00 51.55 C
ATOM 8 O4' G B1813 122.418 125.621 59.023 1.00 52.83 O
ATOM 9 C3' G B1813 122.841 123.694 57.711 1.00 53.22 C
ATOM 10 O3' G B1813 123.177 124.232 56.438 1.00 55.85 O
ATOM 11 C2' G B1813 124.011 123.958 58.646 1.00 52.04 C
ATOM 12 O2' G B1813 125.259 123.756 58.025 1.00 55.09 O
ATOM 13 C1' G B1813 123.813 125.442 58.920 1.00 50.27 C
ATOM 14 N9 G B1813 124.432 125.963 60.130 1.00 47.96 N
ATOM 15 C8 G B1813 125.128 125.272 61.087 1.00 48.04 C
ATOM 16 N7 G B1813 125.568 126.037 62.048 1.00 48.56 N
ATOM 17 C5 G B1813 125.136 127.307 61.703 1.00 48.76 C
ATOM 18 C6 G B1813 125.316 128.552 62.359 1.00 49.99 C
ATOM 19 O6 G B1813 125.926 128.792 63.409 1.00 51.74 O
ATOM 20 N1 G B1813 124.696 129.588 61.667 1.00 50.10 N
ATOM 21 C2 G B1813 123.995 129.445 60.496 1.00 49.96 C
ATOM 22 N2 G B1813 123.448 130.558 59.988 1.00 50.73 N
ATOM 23 N3 G B1813 123.835 128.296 59.871 1.00 50.25 N
ATOM 24 C4 G B1813 124.427 127.276 60.526 1.00 48.93 C
ATOM 25 P C B1814 122.177 124.036 55.200 1.00 59.80 P
ATOM 26 OP1 C B1814 121.588 122.671 55.306 1.00 58.47 O
ATOM 27 OP2 C B1814 122.880 124.434 53.949 1.00 58.96 O
ATOM 28 O5' C B1814 121.030 125.105 55.484 1.00 58.55 O
TER
Atoms:
OP1: (124.736,134.550,62.620)
OP2: (124.725,132.170,61.662)
C3': (124.798,131.610,66.716)
C1': (123.163,130.060,66.043)
C5': (123.707,133.292,65.161)
O4': (122.572,131.338,65.941)
C8: (122.230,129.581,63.703)
O2': (125.379,129.240,66.566)
C6: (122.095,126.083,63.497)
C5: (122.188,127.458,63.733)
C4: (122.610,127.850,64.989)
P: (124.158,133.180,62.582)
C4': (123.533,132.359,66.324)
C2': (124.666,130.297,65.959)
C2: (122.788,125.782,65.682)
N1: (122.400,125.253,64.515)
N3: (122.929,127.054,66.021)
N6: (121.736,125.554,62.323)
N7: (121.940,128.562,62.930)
N9: (122.670,129.219,64.953)
O5': (124.237,132.574,64.046)
O3': (124.803,131.365,68.105)
OP2: (124.725,132.170,61.662)
C3': (124.798,131.610,66.716)
C1': (123.163,130.060,66.043)
C5': (123.707,133.292,65.161)
O4': (122.572,131.338,65.941)
C8: (122.230,129.581,63.703)
O2': (125.379,129.240,66.566)
C6: (122.095,126.083,63.497)
C5: (122.188,127.458,63.733)
C4: (122.610,127.850,64.989)
P: (124.158,133.180,62.582)
C4': (123.533,132.359,66.324)
C2': (124.666,130.297,65.959)
C2: (122.788,125.782,65.682)
N1: (122.400,125.253,64.515)
N3: (122.929,127.054,66.021)
N6: (121.736,125.554,62.323)
N7: (121.940,128.562,62.930)
N9: (122.670,129.219,64.953)
O5': (124.237,132.574,64.046)
O3': (124.803,131.365,68.105)
OP1: (121.417,120.843,59.284)
OP2: (122.004,121.096,61.764)
C3': (122.841,123.694,57.711)
C1': (123.813,125.442,58.920)
C5': (120.813,123.835,59.297)
O6: (125.926,128.792,63.409)
O4': (122.418,125.621,59.023)
C8: (125.128,125.272,61.087)
C2: (123.995,129.445,60.496)
C6: (125.316,128.552,62.359)
C5: (125.136,127.307,61.703)
C4: (124.427,127.276,60.526)
P: (121.256,121.565,60.565)
C4': (121.740,124.543,58.335)
C2': (124.011,123.958,58.646)
O2': (125.259,123.756,58.025)
N1: (124.696,129.588,61.667)
N2: (123.448,130.558,59.988)
N3: (123.835,128.296,59.871)
N7: (125.568,126.037,62.048)
N9: (124.432,125.963,60.130)
O5': (121.565,123.107,60.293)
O3': (123.177,124.232,56.438)
OP2: (122.004,121.096,61.764)
C3': (122.841,123.694,57.711)
C1': (123.813,125.442,58.920)
C5': (120.813,123.835,59.297)
O6: (125.926,128.792,63.409)
O4': (122.418,125.621,59.023)
C8: (125.128,125.272,61.087)
C2: (123.995,129.445,60.496)
C6: (125.316,128.552,62.359)
C5: (125.136,127.307,61.703)
C4: (124.427,127.276,60.526)
P: (121.256,121.565,60.565)
C4': (121.740,124.543,58.335)
C2': (124.011,123.958,58.646)
O2': (125.259,123.756,58.025)
N1: (124.696,129.588,61.667)
N2: (123.448,130.558,59.988)
N3: (123.835,128.296,59.871)
N7: (125.568,126.037,62.048)
N9: (124.432,125.963,60.130)
O5': (121.565,123.107,60.293)
O3': (123.177,124.232,56.438)
Image (generated by PyMOL):