Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01833:01813
Extra
PDB:
ATOM 1 O3' U A1832 122.257 133.198 62.081 1.00 38.24 O
ATOM 2 P A A1833 123.835 133.049 62.297 1.00 38.96 P
ATOM 3 OP1 A A1833 124.391 134.425 62.361 1.00 39.75 O
ATOM 4 OP2 A A1833 124.388 132.079 61.326 1.00 37.46 O
ATOM 5 O5' A A1833 123.952 132.401 63.734 1.00 37.52 O
ATOM 6 C5' A A1833 123.416 133.064 64.873 1.00 39.26 C
ATOM 7 C4' A A1833 123.237 132.073 65.980 1.00 41.67 C
ATOM 8 O4' A A1833 122.293 131.068 65.512 1.00 42.16 O
ATOM 9 C3' A A1833 124.511 131.319 66.354 1.00 42.54 C
ATOM 10 O3' A A1833 124.537 131.041 67.750 1.00 45.35 O
ATOM 11 C2' A A1833 124.387 130.030 65.551 1.00 41.03 C
ATOM 12 O2' A A1833 125.061 128.955 66.157 1.00 44.05 O
ATOM 13 C1' A A1833 122.882 129.789 65.590 1.00 40.71 C
ATOM 14 N9 A A1833 122.385 128.956 64.491 1.00 38.74 N
ATOM 15 C8 A A1833 121.962 129.317 63.231 1.00 37.86 C
ATOM 16 N7 A A1833 121.648 128.296 62.465 1.00 36.05 N
ATOM 17 C5 A A1833 121.863 127.193 63.281 1.00 36.04 C
ATOM 18 C6 A A1833 121.734 125.812 63.061 1.00 36.10 C
ATOM 19 N6 A A1833 121.363 125.273 61.894 1.00 36.71 N
ATOM 20 N1 A A1833 122.014 124.987 64.092 1.00 35.22 N
ATOM 21 C2 A A1833 122.407 125.519 65.254 1.00 33.90 C
ATOM 22 N3 A A1833 122.581 126.789 65.579 1.00 34.44 N
ATOM 23 C4 A A1833 122.292 127.586 64.537 1.00 36.70 C
ATOM 24 P C A1834 125.677 131.704 68.665 1.00 48.16 P
ATOM 25 OP1 C A1834 126.857 131.954 67.794 1.00 49.13 O
ATOM 26 OP2 C A1834 125.831 130.884 69.905 1.00 45.57 O
ATOM 27 O5' C A1834 125.071 133.121 69.060 1.00 46.66 O
TER
ATOM 1 O3' C B1812 119.470 121.209 60.616 1.00 47.05 O
ATOM 2 P G B1813 121.028 121.317 60.237 1.00 48.60 P
ATOM 3 OP1 G B1813 121.170 120.624 58.934 1.00 48.47 O
ATOM 4 OP2 G B1813 121.841 120.877 61.399 1.00 46.75 O
ATOM 5 O5' G B1813 121.265 122.874 59.988 1.00 48.23 O
ATOM 6 C5' G B1813 120.493 123.577 58.990 1.00 48.95 C
ATOM 7 C4' G B1813 121.401 124.304 58.024 1.00 48.09 C
ATOM 8 O4' G B1813 122.040 125.417 58.697 1.00 47.60 O
ATOM 9 C3' G B1813 122.528 123.478 57.417 1.00 49.06 C
ATOM 10 O3' G B1813 122.851 123.987 56.130 1.00 50.95 O
ATOM 11 C2' G B1813 123.692 123.807 58.336 1.00 48.48 C
ATOM 12 O2' G B1813 124.950 123.637 57.717 1.00 52.64 O
ATOM 13 C1' G B1813 123.438 125.288 58.593 1.00 46.14 C
ATOM 14 N9 G B1813 124.042 125.815 59.808 1.00 44.21 N
ATOM 15 C8 G B1813 124.705 125.116 60.782 1.00 43.62 C
ATOM 16 N7 G B1813 125.171 125.879 61.729 1.00 43.84 N
ATOM 17 C5 G B1813 124.787 127.158 61.358 1.00 43.15 C
ATOM 18 C6 G B1813 125.027 128.404 61.985 1.00 43.50 C
ATOM 19 O6 G B1813 125.669 128.637 63.016 1.00 43.41 O
ATOM 20 N1 G B1813 124.442 129.449 61.282 1.00 43.70 N
ATOM 21 C2 G B1813 123.728 129.314 60.121 1.00 44.89 C
ATOM 22 N2 G B1813 123.218 130.441 59.599 1.00 46.10 N
ATOM 23 N3 G B1813 123.520 128.159 59.515 1.00 44.94 N
ATOM 24 C4 G B1813 124.074 127.132 60.186 1.00 43.53 C
ATOM 25 P C B1814 121.839 123.770 54.909 1.00 53.31 P
ATOM 26 OP1 C B1814 121.125 122.478 55.129 1.00 52.78 O
ATOM 27 OP2 C B1814 122.573 123.998 53.639 1.00 53.12 O
ATOM 28 O5' C B1814 120.793 124.954 55.092 1.00 51.05 O
TER
ATOM 2 P A A1833 123.835 133.049 62.297 1.00 38.96 P
ATOM 3 OP1 A A1833 124.391 134.425 62.361 1.00 39.75 O
ATOM 4 OP2 A A1833 124.388 132.079 61.326 1.00 37.46 O
ATOM 5 O5' A A1833 123.952 132.401 63.734 1.00 37.52 O
ATOM 6 C5' A A1833 123.416 133.064 64.873 1.00 39.26 C
ATOM 7 C4' A A1833 123.237 132.073 65.980 1.00 41.67 C
ATOM 8 O4' A A1833 122.293 131.068 65.512 1.00 42.16 O
ATOM 9 C3' A A1833 124.511 131.319 66.354 1.00 42.54 C
ATOM 10 O3' A A1833 124.537 131.041 67.750 1.00 45.35 O
ATOM 11 C2' A A1833 124.387 130.030 65.551 1.00 41.03 C
ATOM 12 O2' A A1833 125.061 128.955 66.157 1.00 44.05 O
ATOM 13 C1' A A1833 122.882 129.789 65.590 1.00 40.71 C
ATOM 14 N9 A A1833 122.385 128.956 64.491 1.00 38.74 N
ATOM 15 C8 A A1833 121.962 129.317 63.231 1.00 37.86 C
ATOM 16 N7 A A1833 121.648 128.296 62.465 1.00 36.05 N
ATOM 17 C5 A A1833 121.863 127.193 63.281 1.00 36.04 C
ATOM 18 C6 A A1833 121.734 125.812 63.061 1.00 36.10 C
ATOM 19 N6 A A1833 121.363 125.273 61.894 1.00 36.71 N
ATOM 20 N1 A A1833 122.014 124.987 64.092 1.00 35.22 N
ATOM 21 C2 A A1833 122.407 125.519 65.254 1.00 33.90 C
ATOM 22 N3 A A1833 122.581 126.789 65.579 1.00 34.44 N
ATOM 23 C4 A A1833 122.292 127.586 64.537 1.00 36.70 C
ATOM 24 P C A1834 125.677 131.704 68.665 1.00 48.16 P
ATOM 25 OP1 C A1834 126.857 131.954 67.794 1.00 49.13 O
ATOM 26 OP2 C A1834 125.831 130.884 69.905 1.00 45.57 O
ATOM 27 O5' C A1834 125.071 133.121 69.060 1.00 46.66 O
TER
ATOM 1 O3' C B1812 119.470 121.209 60.616 1.00 47.05 O
ATOM 2 P G B1813 121.028 121.317 60.237 1.00 48.60 P
ATOM 3 OP1 G B1813 121.170 120.624 58.934 1.00 48.47 O
ATOM 4 OP2 G B1813 121.841 120.877 61.399 1.00 46.75 O
ATOM 5 O5' G B1813 121.265 122.874 59.988 1.00 48.23 O
ATOM 6 C5' G B1813 120.493 123.577 58.990 1.00 48.95 C
ATOM 7 C4' G B1813 121.401 124.304 58.024 1.00 48.09 C
ATOM 8 O4' G B1813 122.040 125.417 58.697 1.00 47.60 O
ATOM 9 C3' G B1813 122.528 123.478 57.417 1.00 49.06 C
ATOM 10 O3' G B1813 122.851 123.987 56.130 1.00 50.95 O
ATOM 11 C2' G B1813 123.692 123.807 58.336 1.00 48.48 C
ATOM 12 O2' G B1813 124.950 123.637 57.717 1.00 52.64 O
ATOM 13 C1' G B1813 123.438 125.288 58.593 1.00 46.14 C
ATOM 14 N9 G B1813 124.042 125.815 59.808 1.00 44.21 N
ATOM 15 C8 G B1813 124.705 125.116 60.782 1.00 43.62 C
ATOM 16 N7 G B1813 125.171 125.879 61.729 1.00 43.84 N
ATOM 17 C5 G B1813 124.787 127.158 61.358 1.00 43.15 C
ATOM 18 C6 G B1813 125.027 128.404 61.985 1.00 43.50 C
ATOM 19 O6 G B1813 125.669 128.637 63.016 1.00 43.41 O
ATOM 20 N1 G B1813 124.442 129.449 61.282 1.00 43.70 N
ATOM 21 C2 G B1813 123.728 129.314 60.121 1.00 44.89 C
ATOM 22 N2 G B1813 123.218 130.441 59.599 1.00 46.10 N
ATOM 23 N3 G B1813 123.520 128.159 59.515 1.00 44.94 N
ATOM 24 C4 G B1813 124.074 127.132 60.186 1.00 43.53 C
ATOM 25 P C B1814 121.839 123.770 54.909 1.00 53.31 P
ATOM 26 OP1 C B1814 121.125 122.478 55.129 1.00 52.78 O
ATOM 27 OP2 C B1814 122.573 123.998 53.639 1.00 53.12 O
ATOM 28 O5' C B1814 120.793 124.954 55.092 1.00 51.05 O
TER
Atoms:
OP1: (124.391,134.425,62.361)
OP2: (124.388,132.079,61.326)
C3': (124.511,131.319,66.354)
C1': (122.882,129.789,65.590)
C5': (123.416,133.064,64.873)
O4': (122.293,131.068,65.512)
C8: (121.962,129.317,63.231)
O2': (125.061,128.955,66.157)
C6: (121.734,125.812,63.061)
C5: (121.863,127.193,63.281)
C4: (122.292,127.586,64.537)
P: (123.835,133.049,62.297)
C4': (123.237,132.073,65.980)
C2': (124.387,130.030,65.551)
C2: (122.407,125.519,65.254)
N1: (122.014,124.987,64.092)
N3: (122.581,126.789,65.579)
N6: (121.363,125.273,61.894)
N7: (121.648,128.296,62.465)
N9: (122.385,128.956,64.491)
O5': (123.952,132.401,63.734)
O3': (124.537,131.041,67.750)
OP2: (124.388,132.079,61.326)
C3': (124.511,131.319,66.354)
C1': (122.882,129.789,65.590)
C5': (123.416,133.064,64.873)
O4': (122.293,131.068,65.512)
C8: (121.962,129.317,63.231)
O2': (125.061,128.955,66.157)
C6: (121.734,125.812,63.061)
C5: (121.863,127.193,63.281)
C4: (122.292,127.586,64.537)
P: (123.835,133.049,62.297)
C4': (123.237,132.073,65.980)
C2': (124.387,130.030,65.551)
C2: (122.407,125.519,65.254)
N1: (122.014,124.987,64.092)
N3: (122.581,126.789,65.579)
N6: (121.363,125.273,61.894)
N7: (121.648,128.296,62.465)
N9: (122.385,128.956,64.491)
O5': (123.952,132.401,63.734)
O3': (124.537,131.041,67.750)
OP1: (121.170,120.624,58.934)
OP2: (121.841,120.877,61.399)
C3': (122.528,123.478,57.417)
C1': (123.438,125.288,58.593)
C5': (120.493,123.577,58.990)
O6: (125.669,128.637,63.016)
O4': (122.040,125.417,58.697)
C8: (124.705,125.116,60.782)
C2: (123.728,129.314,60.121)
C6: (125.027,128.404,61.985)
C5: (124.787,127.158,61.358)
C4: (124.074,127.132,60.186)
P: (121.028,121.317,60.237)
C4': (121.401,124.304,58.024)
C2': (123.692,123.807,58.336)
O2': (124.950,123.637,57.717)
N1: (124.442,129.449,61.282)
N2: (123.218,130.441,59.599)
N3: (123.520,128.159,59.515)
N7: (125.171,125.879,61.729)
N9: (124.042,125.815,59.808)
O5': (121.265,122.874,59.988)
O3': (122.851,123.987,56.130)
OP2: (121.841,120.877,61.399)
C3': (122.528,123.478,57.417)
C1': (123.438,125.288,58.593)
C5': (120.493,123.577,58.990)
O6: (125.669,128.637,63.016)
O4': (122.040,125.417,58.697)
C8: (124.705,125.116,60.782)
C2: (123.728,129.314,60.121)
C6: (125.027,128.404,61.985)
C5: (124.787,127.158,61.358)
C4: (124.074,127.132,60.186)
P: (121.028,121.317,60.237)
C4': (121.401,124.304,58.024)
C2': (123.692,123.807,58.336)
O2': (124.950,123.637,57.717)
N1: (124.442,129.449,61.282)
N2: (123.218,130.441,59.599)
N3: (123.520,128.159,59.515)
N7: (125.171,125.879,61.729)
N9: (124.042,125.815,59.808)
O5': (121.265,122.874,59.988)
O3': (122.851,123.987,56.130)
Image (generated by PyMOL):