ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02719:01747

Extra

PDB:
ATOM 1 O3' A A2718 99.837 211.012 110.098 1.00 92.20 O
ATOM 2 P A A2719 98.617 210.004 110.396 1.00 91.93 P
ATOM 3 OP1 A A2719 97.404 210.835 110.633 1.00 91.70 O
ATOM 4 OP2 A A2719 99.064 209.045 111.439 1.00 91.81 O
ATOM 5 O5' A A2719 98.418 209.212 109.027 1.00 89.72 O
ATOM 6 C5' A A2719 97.853 209.861 107.872 1.00 87.69 C
ATOM 7 C4' A A2719 97.808 208.904 106.705 1.00 87.20 C
ATOM 8 O4' A A2719 99.161 208.475 106.387 1.00 87.18 O
ATOM 9 C3' A A2719 97.064 207.601 106.948 1.00 86.73 C
ATOM 10 O3' A A2719 95.654 207.740 106.803 1.00 85.44 O
ATOM 11 C2' A A2719 97.678 206.686 105.896 1.00 86.91 C
ATOM 12 O2' A A2719 97.163 206.910 104.597 1.00 86.51 O
ATOM 13 C1' A A2719 99.143 207.123 105.949 1.00 86.78 C
ATOM 14 N9 A A2719 99.927 206.322 106.893 1.00 86.29 N
ATOM 15 C8 A A2719 100.137 206.555 108.231 1.00 85.77 C
ATOM 16 N7 A A2719 100.875 205.644 108.817 1.00 85.99 N
ATOM 17 C5 A A2719 101.176 204.751 107.798 1.00 86.08 C
ATOM 18 C6 A A2719 101.933 203.559 107.771 1.00 86.14 C
ATOM 19 N6 A A2719 102.543 203.041 108.840 1.00 85.26 N
ATOM 20 N1 A A2719 102.041 202.909 106.591 1.00 86.17 N
ATOM 21 C2 A A2719 101.427 203.428 105.517 1.00 86.85 C
ATOM 22 N3 A A2719 100.690 204.536 105.416 1.00 86.71 N
ATOM 23 C4 A A2719 100.602 205.158 106.606 1.00 86.38 C
ATOM 24 P C A2720 94.668 207.054 107.877 1.00 84.52 P
ATOM 25 OP1 C A2720 93.343 206.935 107.221 1.00 84.56 O
ATOM 26 OP2 C A2720 94.780 207.767 109.177 1.00 84.49 O
ATOM 27 O5' C A2720 95.257 205.587 108.070 1.00 82.53 O
TER

ATOM 1 O3' U B1746 103.301 199.076 111.111 1.00 71.66 O
ATOM 2 P G B1747 104.052 199.225 109.706 1.00 72.44 P
ATOM 3 OP1 G B1747 103.899 200.626 109.230 1.00 70.78 O
ATOM 4 OP2 G B1747 103.598 198.099 108.845 1.00 73.85 O
ATOM 5 O5' G B1747 105.577 198.967 110.072 1.00 70.33 O
ATOM 6 C5' G B1747 106.279 199.860 110.934 1.00 67.51 C
ATOM 7 C4' G B1747 107.643 199.309 111.252 1.00 66.20 C
ATOM 8 O4' G B1747 107.514 198.087 112.027 1.00 65.88 O
ATOM 9 C3' G B1747 108.493 198.882 110.071 1.00 64.31 C
ATOM 10 O3' G B1747 109.103 199.987 109.421 1.00 64.92 O
ATOM 11 C2' G B1747 109.511 197.974 110.744 1.00 65.07 C
ATOM 12 O2' G B1747 110.540 198.683 111.399 1.00 63.21 O
ATOM 13 C1' G B1747 108.638 197.257 111.778 1.00 66.41 C
ATOM 14 N9 G B1747 108.177 195.963 111.285 1.00 68.70 N
ATOM 15 C8 G B1747 106.957 195.663 110.728 1.00 69.74 C
ATOM 16 N7 G B1747 106.861 194.418 110.349 1.00 70.36 N
ATOM 17 C5 G B1747 108.086 193.859 110.682 1.00 69.59 C
ATOM 18 C6 G B1747 108.573 192.536 110.509 1.00 69.44 C
ATOM 19 O6 G B1747 107.999 191.563 110.008 1.00 67.53 O
ATOM 20 N1 G B1747 109.874 192.405 110.988 1.00 69.69 N
ATOM 21 C2 G B1747 110.614 193.416 111.553 1.00 69.27 C
ATOM 22 N2 G B1747 111.858 193.104 111.932 1.00 68.21 N
ATOM 23 N3 G B1747 110.169 194.647 111.725 1.00 69.47 N
ATOM 24 C4 G B1747 108.907 194.797 111.268 1.00 69.43 C
ATOM 25 P C B1748 109.973 199.747 108.091 1.00 67.01 P
ATOM 26 OP1 C B1748 110.627 201.031 107.736 1.00 67.02 O
ATOM 27 OP2 C B1748 109.118 199.065 107.089 1.00 68.29 O
ATOM 28 O5' C B1748 111.107 198.739 108.575 1.00 65.12 O
TER

Atoms:
OP1: (97.404,210.835,110.633)
OP2: (99.064,209.045,111.439)
C3': (97.064,207.601,106.948)
C1': (99.143,207.123,105.949)
C5': (97.853,209.861,107.872)
O4': (99.161,208.475,106.387)
C8: (100.137,206.555,108.231)
O2': (97.163,206.910,104.597)
C6: (101.933,203.559,107.771)
C5: (101.176,204.751,107.798)
C4: (100.602,205.158,106.606)
P: (98.617,210.004,110.396)
C4': (97.808,208.904,106.705)
C2': (97.678,206.686,105.896)
C2: (101.427,203.428,105.517)
N1: (102.041,202.909,106.591)
N3: (100.690,204.536,105.416)
N6: (102.543,203.041,108.840)
N7: (100.875,205.644,108.817)
N9: (99.927,206.322,106.893)
O5': (98.418,209.212,109.027)
O3': (95.654,207.740,106.803)
OP1: (103.899,200.626,109.230)
OP2: (103.598,198.099,108.845)
C3': (108.493,198.882,110.071)
C1': (108.638,197.257,111.778)
C5': (106.279,199.860,110.934)
O6: (107.999,191.563,110.008)
O4': (107.514,198.087,112.027)
C8: (106.957,195.663,110.728)
C2: (110.614,193.416,111.553)
C6: (108.573,192.536,110.509)
C5: (108.086,193.859,110.682)
C4: (108.907,194.797,111.268)
P: (104.052,199.225,109.706)
C4': (107.643,199.309,111.252)
C2': (109.511,197.974,110.744)
O2': (110.540,198.683,111.399)
N1: (109.874,192.405,110.988)
N2: (111.858,193.104,111.932)
N3: (110.169,194.647,111.725)
N7: (106.861,194.418,110.349)
N9: (108.177,195.963,111.285)
O5': (105.577,198.967,110.072)
O3': (109.103,199.987,109.421)
Image (generated by PyMOL):
PyMOL image
show in jmol