ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01833:01813

Extra

PDB:
ATOM 1 O3' U A1832 122.096 132.928 61.986 1.00 32.40 O
ATOM 2 P A A1833 123.668 132.762 62.227 1.00 35.37 P
ATOM 3 OP1 A A1833 124.229 134.133 62.329 1.00 37.16 O
ATOM 4 OP2 A A1833 124.224 131.819 61.224 1.00 33.81 O
ATOM 5 O5' A A1833 123.750 132.080 63.659 1.00 33.01 O
ATOM 6 C5' A A1833 123.226 132.748 64.812 1.00 34.12 C
ATOM 7 C4' A A1833 123.102 131.777 65.954 1.00 35.31 C
ATOM 8 O4' A A1833 122.118 130.772 65.593 1.00 35.75 O
ATOM 9 C3' A A1833 124.381 131.021 66.290 1.00 35.63 C
ATOM 10 O3' A A1833 124.445 130.759 67.686 1.00 36.15 O
ATOM 11 C2' A A1833 124.212 129.723 65.515 1.00 35.28 C
ATOM 12 O2' A A1833 124.940 128.654 66.079 1.00 35.95 O
ATOM 13 C1' A A1833 122.707 129.491 65.640 1.00 36.65 C
ATOM 14 N9 A A1833 122.164 128.683 64.548 1.00 36.98 N
ATOM 15 C8 A A1833 121.667 129.098 63.338 1.00 36.99 C
ATOM 16 N7 A A1833 121.340 128.114 62.534 1.00 38.18 N
ATOM 17 C5 A A1833 121.621 126.974 63.271 1.00 38.02 C
ATOM 18 C6 A A1833 121.514 125.603 62.973 1.00 38.91 C
ATOM 19 N6 A A1833 121.099 125.128 61.795 1.00 38.11 N
ATOM 20 N1 A A1833 121.866 124.724 63.939 1.00 39.85 N
ATOM 21 C2 A A1833 122.304 125.201 65.114 1.00 39.05 C
ATOM 22 N3 A A1833 122.460 126.462 65.506 1.00 38.17 N
ATOM 23 C4 A A1833 122.100 127.310 64.526 1.00 38.10 C
ATOM 24 P C A1834 125.532 131.526 68.587 1.00 39.22 P
ATOM 25 OP1 C A1834 126.719 131.826 67.731 1.00 37.92 O
ATOM 26 OP2 C A1834 125.713 130.762 69.865 1.00 36.19 O
ATOM 27 O5' C A1834 124.817 132.909 68.930 1.00 37.83 O
TER

ATOM 1 O3' C B1812 119.302 121.012 60.600 1.00 35.69 O
ATOM 2 P G B1813 120.855 121.192 60.249 1.00 38.33 P
ATOM 3 OP1 G B1813 121.157 120.404 59.031 1.00 37.73 O
ATOM 4 OP2 G B1813 121.622 120.941 61.493 1.00 39.18 O
ATOM 5 O5' G B1813 121.000 122.740 59.900 1.00 39.11 O
ATOM 6 C5' G B1813 120.264 123.325 58.809 1.00 38.57 C
ATOM 7 C4' G B1813 121.198 124.081 57.889 1.00 37.54 C
ATOM 8 O4' G B1813 121.842 125.150 58.628 1.00 36.29 O
ATOM 9 C3' G B1813 122.330 123.267 57.267 1.00 37.79 C
ATOM 10 O3' G B1813 122.665 123.821 56.002 1.00 39.31 O
ATOM 11 C2' G B1813 123.491 123.560 58.203 1.00 37.96 C
ATOM 12 O2' G B1813 124.754 123.408 57.584 1.00 40.22 O
ATOM 13 C1' G B1813 123.237 125.030 58.499 1.00 36.46 C
ATOM 14 N9 G B1813 123.864 125.556 59.701 1.00 36.56 N
ATOM 15 C8 G B1813 124.604 124.875 60.631 1.00 37.25 C
ATOM 16 N7 G B1813 125.059 125.642 61.581 1.00 39.14 N
ATOM 17 C5 G B1813 124.584 126.903 61.260 1.00 37.72 C
ATOM 18 C6 G B1813 124.760 128.139 61.915 1.00 37.69 C
ATOM 19 O6 G B1813 125.390 128.378 62.948 1.00 37.95 O
ATOM 20 N1 G B1813 124.109 129.168 61.247 1.00 37.98 N
ATOM 21 C2 G B1813 123.381 129.024 60.093 1.00 38.42 C
ATOM 22 N2 G B1813 122.823 130.139 59.592 1.00 39.16 N
ATOM 23 N3 G B1813 123.211 127.874 59.473 1.00 38.31 N
ATOM 24 C4 G B1813 123.838 126.863 60.107 1.00 37.62 C
ATOM 25 P C B1814 121.700 123.588 54.748 1.00 40.24 P
ATOM 26 OP1 C B1814 121.011 122.289 54.943 1.00 40.82 O
ATOM 27 OP2 C B1814 122.475 123.822 53.509 1.00 42.09 O
ATOM 28 O5' C B1814 120.633 124.759 54.894 1.00 40.88 O
TER

Atoms:
OP1: (124.229,134.133,62.329)
OP2: (124.224,131.819,61.224)
C3': (124.381,131.021,66.290)
C1': (122.707,129.491,65.640)
C5': (123.226,132.748,64.812)
O4': (122.118,130.772,65.593)
C8: (121.667,129.098,63.338)
O2': (124.940,128.654,66.079)
C6: (121.514,125.603,62.973)
C5: (121.621,126.974,63.271)
C4: (122.100,127.310,64.526)
P: (123.668,132.762,62.227)
C4': (123.102,131.777,65.954)
C2': (124.212,129.723,65.515)
C2: (122.304,125.201,65.114)
N1: (121.866,124.724,63.939)
N3: (122.460,126.462,65.506)
N6: (121.099,125.128,61.795)
N7: (121.340,128.114,62.534)
N9: (122.164,128.683,64.548)
O5': (123.750,132.080,63.659)
O3': (124.445,130.759,67.686)
OP1: (121.157,120.404,59.031)
OP2: (121.622,120.941,61.493)
C3': (122.330,123.267,57.267)
C1': (123.237,125.030,58.499)
C5': (120.264,123.325,58.809)
O6: (125.390,128.378,62.948)
O4': (121.842,125.150,58.628)
C8: (124.604,124.875,60.631)
C2: (123.381,129.024,60.093)
C6: (124.760,128.139,61.915)
C5: (124.584,126.903,61.260)
C4: (123.838,126.863,60.107)
P: (120.855,121.192,60.249)
C4': (121.198,124.081,57.889)
C2': (123.491,123.560,58.203)
O2': (124.754,123.408,57.584)
N1: (124.109,129.168,61.247)
N2: (122.823,130.139,59.592)
N3: (123.211,127.874,59.473)
N7: (125.059,125.642,61.581)
N9: (123.864,125.556,59.701)
O5': (121.000,122.740,59.900)
O3': (122.665,123.821,56.002)
Image (generated by PyMOL):
PyMOL image
show in jmol