Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A440:A460
Extra
PDB:
ATOM 1 O3' G A 439 -9.895 18.645 94.483 1.00 18.26 O
ATOM 2 P A A 440 -9.069 18.595 95.866 1.00 32.45 P
ATOM 3 OP1 A A 440 -10.027 18.810 96.979 1.00 17.67 O
ATOM 4 OP2 A A 440 -7.858 19.464 95.753 1.00 18.68 O
ATOM 5 O5' A A 440 -8.563 17.093 95.949 1.00 27.50 O
ATOM 6 C5' A A 440 -7.312 16.700 95.343 1.00 27.53 C
ATOM 7 C4' A A 440 -7.239 15.196 95.248 1.00 27.64 C
ATOM 8 O4' A A 440 -7.377 14.658 96.589 1.00 27.73 O
ATOM 9 C3' A A 440 -8.341 14.562 94.407 1.00 28.00 C
ATOM 10 O3' A A 440 -7.831 13.405 93.735 1.00 28.08 O
ATOM 11 C2' A A 440 -9.385 14.159 95.448 1.00 28.07 C
ATOM 12 O2' A A 440 -10.155 13.046 95.040 1.00 28.86 O
ATOM 13 C1' A A 440 -8.521 13.832 96.670 1.00 28.30 C
ATOM 14 N9 A A 440 -9.187 14.124 97.943 1.00 25.75 N
ATOM 15 C8 A A 440 -9.232 15.331 98.594 1.00 27.07 C
ATOM 16 N7 A A 440 -9.933 15.314 99.699 1.00 28.15 N
ATOM 17 C5 A A 440 -10.374 14.004 99.792 1.00 27.55 C
ATOM 18 C6 A A 440 -11.183 13.343 100.740 1.00 27.84 C
ATOM 19 N6 A A 440 -11.723 13.934 101.814 1.00 28.01 N
ATOM 20 N1 A A 440 -11.429 12.036 100.538 1.00 28.43 N
ATOM 21 C2 A A 440 -10.903 11.446 99.452 1.00 28.35 C
ATOM 22 N3 A A 440 -10.139 11.960 98.494 1.00 27.75 N
ATOM 23 C4 A A 440 -9.909 13.257 98.723 1.00 27.11 C
ATOM 24 P A A 441 -7.479 13.465 92.160 1.00 53.26 P
ATOM 25 OP1 A A 441 -8.013 14.722 91.587 1.00 68.09 O
ATOM 26 OP2 A A 441 -7.890 12.166 91.571 1.00 66.77 O
ATOM 27 O5' A A 441 -5.890 13.583 92.128 1.00 10.13 O
TER
ATOM 1 O3' U B 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 2 P G B 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 3 OP1 G B 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 4 OP2 G B 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 5 O5' G B 460 -13.483 12.692 103.821 1.00 20.90 O
ATOM 6 C5' G B 460 -13.398 13.907 104.615 1.00 18.10 C
ATOM 7 C4' G B 460 -14.417 14.929 104.149 1.00 16.02 C
ATOM 8 O4' G B 460 -14.024 15.456 102.858 1.00 16.12 O
ATOM 9 C3' G B 460 -15.843 14.420 103.997 1.00 15.22 C
ATOM 10 O3' G B 460 -16.759 15.435 104.355 1.00 14.92 O
ATOM 11 C2' G B 460 -15.974 14.195 102.502 1.00 15.75 C
ATOM 12 O2' G B 460 -17.305 14.368 102.091 1.00 15.60 O
ATOM 13 C1' G B 460 -15.087 15.304 101.939 1.00 16.03 C
ATOM 14 N9 G B 460 -14.504 15.015 100.632 1.00 23.03 N
ATOM 15 C8 G B 460 -14.643 13.873 99.884 1.00 23.24 C
ATOM 16 N7 G B 460 -13.935 13.891 98.789 1.00 23.60 N
ATOM 17 C5 G B 460 -13.304 15.124 98.808 1.00 23.82 C
ATOM 18 C6 G B 460 -12.389 15.693 97.896 1.00 24.18 C
ATOM 19 O6 G B 460 -11.921 15.195 96.869 1.00 26.03 O
ATOM 20 N1 G B 460 -12.004 16.972 98.284 1.00 23.09 N
ATOM 21 C2 G B 460 -12.435 17.618 99.419 1.00 22.49 C
ATOM 22 N2 G B 460 -11.957 18.865 99.616 1.00 21.10 N
ATOM 23 N3 G B 460 -13.273 17.082 100.293 1.00 23.99 N
ATOM 24 C4 G B 460 -13.664 15.841 99.924 1.00 24.05 C
ATOM 25 P A B 461 -17.593 15.307 105.720 1.00 62.73 P
ATOM 26 OP1 A B 461 -16.610 14.839 106.737 1.00 13.46 O
ATOM 27 OP2 A B 461 -18.853 14.548 105.494 1.00 13.09 O
ATOM 28 O5' A B 461 -18.007 16.812 106.025 1.00 39.41 O
TER
ATOM 2 P A A 440 -9.069 18.595 95.866 1.00 32.45 P
ATOM 3 OP1 A A 440 -10.027 18.810 96.979 1.00 17.67 O
ATOM 4 OP2 A A 440 -7.858 19.464 95.753 1.00 18.68 O
ATOM 5 O5' A A 440 -8.563 17.093 95.949 1.00 27.50 O
ATOM 6 C5' A A 440 -7.312 16.700 95.343 1.00 27.53 C
ATOM 7 C4' A A 440 -7.239 15.196 95.248 1.00 27.64 C
ATOM 8 O4' A A 440 -7.377 14.658 96.589 1.00 27.73 O
ATOM 9 C3' A A 440 -8.341 14.562 94.407 1.00 28.00 C
ATOM 10 O3' A A 440 -7.831 13.405 93.735 1.00 28.08 O
ATOM 11 C2' A A 440 -9.385 14.159 95.448 1.00 28.07 C
ATOM 12 O2' A A 440 -10.155 13.046 95.040 1.00 28.86 O
ATOM 13 C1' A A 440 -8.521 13.832 96.670 1.00 28.30 C
ATOM 14 N9 A A 440 -9.187 14.124 97.943 1.00 25.75 N
ATOM 15 C8 A A 440 -9.232 15.331 98.594 1.00 27.07 C
ATOM 16 N7 A A 440 -9.933 15.314 99.699 1.00 28.15 N
ATOM 17 C5 A A 440 -10.374 14.004 99.792 1.00 27.55 C
ATOM 18 C6 A A 440 -11.183 13.343 100.740 1.00 27.84 C
ATOM 19 N6 A A 440 -11.723 13.934 101.814 1.00 28.01 N
ATOM 20 N1 A A 440 -11.429 12.036 100.538 1.00 28.43 N
ATOM 21 C2 A A 440 -10.903 11.446 99.452 1.00 28.35 C
ATOM 22 N3 A A 440 -10.139 11.960 98.494 1.00 27.75 N
ATOM 23 C4 A A 440 -9.909 13.257 98.723 1.00 27.11 C
ATOM 24 P A A 441 -7.479 13.465 92.160 1.00 53.26 P
ATOM 25 OP1 A A 441 -8.013 14.722 91.587 1.00 68.09 O
ATOM 26 OP2 A A 441 -7.890 12.166 91.571 1.00 66.77 O
ATOM 27 O5' A A 441 -5.890 13.583 92.128 1.00 10.13 O
TER
ATOM 1 O3' U B 459 -12.068 11.083 105.158 1.00 21.61 O
ATOM 2 P G B 460 -13.531 11.255 104.522 1.00 37.87 P
ATOM 3 OP1 G B 460 -14.499 11.304 105.655 1.00 29.21 O
ATOM 4 OP2 G B 460 -13.699 10.231 103.465 1.00 30.27 O
ATOM 5 O5' G B 460 -13.483 12.692 103.821 1.00 20.90 O
ATOM 6 C5' G B 460 -13.398 13.907 104.615 1.00 18.10 C
ATOM 7 C4' G B 460 -14.417 14.929 104.149 1.00 16.02 C
ATOM 8 O4' G B 460 -14.024 15.456 102.858 1.00 16.12 O
ATOM 9 C3' G B 460 -15.843 14.420 103.997 1.00 15.22 C
ATOM 10 O3' G B 460 -16.759 15.435 104.355 1.00 14.92 O
ATOM 11 C2' G B 460 -15.974 14.195 102.502 1.00 15.75 C
ATOM 12 O2' G B 460 -17.305 14.368 102.091 1.00 15.60 O
ATOM 13 C1' G B 460 -15.087 15.304 101.939 1.00 16.03 C
ATOM 14 N9 G B 460 -14.504 15.015 100.632 1.00 23.03 N
ATOM 15 C8 G B 460 -14.643 13.873 99.884 1.00 23.24 C
ATOM 16 N7 G B 460 -13.935 13.891 98.789 1.00 23.60 N
ATOM 17 C5 G B 460 -13.304 15.124 98.808 1.00 23.82 C
ATOM 18 C6 G B 460 -12.389 15.693 97.896 1.00 24.18 C
ATOM 19 O6 G B 460 -11.921 15.195 96.869 1.00 26.03 O
ATOM 20 N1 G B 460 -12.004 16.972 98.284 1.00 23.09 N
ATOM 21 C2 G B 460 -12.435 17.618 99.419 1.00 22.49 C
ATOM 22 N2 G B 460 -11.957 18.865 99.616 1.00 21.10 N
ATOM 23 N3 G B 460 -13.273 17.082 100.293 1.00 23.99 N
ATOM 24 C4 G B 460 -13.664 15.841 99.924 1.00 24.05 C
ATOM 25 P A B 461 -17.593 15.307 105.720 1.00 62.73 P
ATOM 26 OP1 A B 461 -16.610 14.839 106.737 1.00 13.46 O
ATOM 27 OP2 A B 461 -18.853 14.548 105.494 1.00 13.09 O
ATOM 28 O5' A B 461 -18.007 16.812 106.025 1.00 39.41 O
TER
Atoms:
OP1: (-10.027,18.810,96.979)
OP2: (-7.858,19.464,95.753)
C3': (-8.341,14.562,94.407)
C1': (-8.521,13.832,96.670)
C5': (-7.312,16.700,95.343)
O4': (-7.377,14.658,96.589)
C8: (-9.232,15.331,98.594)
O2': (-10.155,13.046,95.040)
C6: (-11.183,13.343,100.740)
C5: (-10.374,14.004,99.792)
C4: (-9.909,13.257,98.723)
P: (-9.069,18.595,95.866)
C4': (-7.239,15.196,95.248)
C2': (-9.385,14.159,95.448)
C2: (-10.903,11.446,99.452)
N1: (-11.429,12.036,100.538)
N3: (-10.139,11.960,98.494)
N6: (-11.723,13.934,101.814)
N7: (-9.933,15.314,99.699)
N9: (-9.187,14.124,97.943)
O5': (-8.563,17.093,95.949)
O3': (-7.831,13.405,93.735)
OP2: (-7.858,19.464,95.753)
C3': (-8.341,14.562,94.407)
C1': (-8.521,13.832,96.670)
C5': (-7.312,16.700,95.343)
O4': (-7.377,14.658,96.589)
C8: (-9.232,15.331,98.594)
O2': (-10.155,13.046,95.040)
C6: (-11.183,13.343,100.740)
C5: (-10.374,14.004,99.792)
C4: (-9.909,13.257,98.723)
P: (-9.069,18.595,95.866)
C4': (-7.239,15.196,95.248)
C2': (-9.385,14.159,95.448)
C2: (-10.903,11.446,99.452)
N1: (-11.429,12.036,100.538)
N3: (-10.139,11.960,98.494)
N6: (-11.723,13.934,101.814)
N7: (-9.933,15.314,99.699)
N9: (-9.187,14.124,97.943)
O5': (-8.563,17.093,95.949)
O3': (-7.831,13.405,93.735)
OP1: (-14.499,11.304,105.655)
OP2: (-13.699,10.231,103.465)
C3': (-15.843,14.420,103.997)
C1': (-15.087,15.304,101.939)
C5': (-13.398,13.907,104.615)
O6: (-11.921,15.195,96.869)
O4': (-14.024,15.456,102.858)
C8: (-14.643,13.873,99.884)
C2: (-12.435,17.618,99.419)
C6: (-12.389,15.693,97.896)
C5: (-13.304,15.124,98.808)
C4: (-13.664,15.841,99.924)
P: (-13.531,11.255,104.522)
C4': (-14.417,14.929,104.149)
C2': (-15.974,14.195,102.502)
O2': (-17.305,14.368,102.091)
N1: (-12.004,16.972,98.284)
N2: (-11.957,18.865,99.616)
N3: (-13.273,17.082,100.293)
N7: (-13.935,13.891,98.789)
N9: (-14.504,15.015,100.632)
O5': (-13.483,12.692,103.821)
O3': (-16.759,15.435,104.355)
OP2: (-13.699,10.231,103.465)
C3': (-15.843,14.420,103.997)
C1': (-15.087,15.304,101.939)
C5': (-13.398,13.907,104.615)
O6: (-11.921,15.195,96.869)
O4': (-14.024,15.456,102.858)
C8: (-14.643,13.873,99.884)
C2: (-12.435,17.618,99.419)
C6: (-12.389,15.693,97.896)
C5: (-13.304,15.124,98.808)
C4: (-13.664,15.841,99.924)
P: (-13.531,11.255,104.522)
C4': (-14.417,14.929,104.149)
C2': (-15.974,14.195,102.502)
O2': (-17.305,14.368,102.091)
N1: (-12.004,16.972,98.284)
N2: (-11.957,18.865,99.616)
N3: (-13.273,17.082,100.293)
N7: (-13.935,13.891,98.789)
N9: (-14.504,15.015,100.632)
O5': (-13.483,12.692,103.821)
O3': (-16.759,15.435,104.355)
Image (generated by PyMOL):