ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A440:A460

Extra

PDB:
ATOM 1 O3' G A 439 -64.399 19.310 -93.585 1.00 40.22 O
ATOM 2 P A A 440 -63.582 17.928 -93.653 1.00 52.37 P
ATOM 3 OP1 A A 440 -64.549 16.830 -93.412 1.00 37.59 O
ATOM 4 OP2 A A 440 -62.360 18.025 -92.804 1.00 38.60 O
ATOM 5 O5' A A 440 -63.112 17.849 -95.177 1.00 62.40 O
ATOM 6 C5' A A 440 -61.862 18.447 -95.601 1.00 62.43 C
ATOM 7 C4' A A 440 -61.826 18.559 -97.104 1.00 62.54 C
ATOM 8 O4' A A 440 -61.990 17.226 -97.650 1.00 62.63 O
ATOM 9 C3' A A 440 -62.928 19.421 -97.710 1.00 62.90 C
ATOM 10 O3' A A 440 -62.435 20.095 -98.867 1.00 62.98 O
ATOM 11 C2' A A 440 -63.986 18.397 -98.111 1.00 62.97 C
ATOM 12 O2' A A 440 -64.761 18.823 -99.213 1.00 63.76 O
ATOM 13 C1' A A 440 -63.137 17.174 -98.466 1.00 63.20 C
ATOM 14 N9 A A 440 -63.811 15.910 -98.185 1.00 67.17 N
ATOM 15 C8 A A 440 -63.832 15.239 -96.992 1.00 68.49 C
ATOM 16 N7 A A 440 -64.543 14.140 -97.015 1.00 69.57 N
ATOM 17 C5 A A 440 -65.020 14.079 -98.313 1.00 68.97 C
ATOM 18 C6 A A 440 -65.856 13.158 -98.969 1.00 69.26 C
ATOM 19 N6 A A 440 -66.392 12.086 -98.379 1.00 69.43 N
ATOM 20 N1 A A 440 -66.135 13.384-100.269 1.00 69.85 N
ATOM 21 C2 A A 440 -65.614 14.470-100.854 1.00 69.77 C
ATOM 22 N3 A A 440 -64.827 15.414-100.340 1.00 69.17 N
ATOM 23 C4 A A 440 -64.566 15.157 -99.050 1.00 68.53 C
ATOM 24 P A A 441 -62.062 21.657 -98.794 1.00 57.75 P
ATOM 25 OP1 A A 441 -62.569 22.229 -97.518 1.00 72.58 O
ATOM 26 OP2 A A 441 -62.487 22.257-100.086 1.00 71.26 O
ATOM 27 O5' A A 441 -60.467 21.676 -98.721 1.00 66.14 O
TER

ATOM 1 O3' U B 459 -66.819 8.756-101.244 1.00 60.43 O
ATOM 2 P G B 460 -68.266 9.412-101.055 1.00 65.85 P
ATOM 3 OP1 G B 460 -69.247 8.301-101.014 1.00 57.19 O
ATOM 4 OP2 G B 460 -68.432 10.490-102.059 1.00 58.25 O
ATOM 5 O5' G B 460 -68.184 10.083 -99.614 1.00 56.15 O
ATOM 6 C5' G B 460 -68.088 9.273 -98.427 1.00 53.35 C
ATOM 7 C4' G B 460 -69.082 9.742 -97.384 1.00 51.27 C
ATOM 8 O4' G B 460 -68.667 11.019 -96.831 1.00 51.37 O
ATOM 9 C3' G B 460 -70.517 9.921 -97.867 1.00 50.47 C
ATOM 10 O3' G B 460 -71.403 9.544 -96.836 1.00 50.17 O
ATOM 11 C2' G B 460 -70.644 11.426 -98.050 1.00 51.00 C
ATOM 12 O2' G B 460 -71.970 11.871 -97.837 1.00 50.85 O
ATOM 13 C1' G B 460 -69.718 11.956 -96.953 1.00 51.28 C
ATOM 14 N9 G B 460 -69.116 13.254 -97.242 1.00 42.01 N
ATOM 15 C8 G B 460 -69.261 14.016 -98.374 1.00 42.22 C
ATOM 16 N7 G B 460 -68.549 15.106 -98.352 1.00 42.58 N
ATOM 17 C5 G B 460 -67.906 15.066 -97.127 1.00 42.80 C
ATOM 18 C6 G B 460 -66.987 15.968 -96.551 1.00 43.16 C
ATOM 19 O6 G B 460 -66.526 17.009 -97.030 1.00 45.01 O
ATOM 20 N1 G B 460 -66.589 15.552 -95.289 1.00 42.07 N
ATOM 21 C2 G B 460 -67.009 14.402 -94.664 1.00 41.47 C
ATOM 22 N2 G B 460 -66.501 14.174 -93.434 1.00 40.08 N
ATOM 23 N3 G B 460 -67.857 13.542 -95.201 1.00 42.97 N
ATOM 24 C4 G B 460 -68.261 13.936 -96.424 1.00 43.03 C
ATOM 25 P A B 461 -72.246 8.192 -96.965 1.00 96.00 P
ATOM 26 OP1 A B 461 -71.313 7.149 -97.457 1.00 46.73 O
ATOM 27 OP2 A B 461 -73.518 8.458 -97.696 1.00 46.36 O
ATOM 28 O5' A B 461 -72.598 7.891 -95.448 1.00 14.72 O
TER

Atoms:
OP1: (-64.549,16.830,-93.412)
OP2: (-62.360,18.025,-92.804)
C3': (-62.928,19.421,-97.710)
C1': (-63.137,17.174,-98.466)
C5': (-61.862,18.447,-95.601)
O4': (-61.990,17.226,-97.650)
C8: (-63.832,15.239,-96.992)
O2': (-64.761,18.823,-99.213)
C6: (-65.856,13.158,-98.969)
C5: (-65.020,14.079,-98.313)
C4: (-64.566,15.157,-99.050)
P: (-63.582,17.928,-93.653)
C4': (-61.826,18.559,-97.104)
C2': (-63.986,18.397,-98.111)
C2: (-65.614,14.470,-100.854)
N1: (-66.135,13.384,-100.269)
N3: (-64.827,15.414,-100.340)
N6: (-66.392,12.086,-98.379)
N7: (-64.543,14.140,-97.015)
N9: (-63.811,15.910,-98.185)
O5': (-63.112,17.849,-95.177)
O3': (-62.435,20.095,-98.867)
OP1: (-69.247,8.301,-101.014)
OP2: (-68.432,10.490,-102.059)
C3': (-70.517,9.921,-97.867)
C1': (-69.718,11.956,-96.953)
C5': (-68.088,9.273,-98.427)
O6: (-66.526,17.009,-97.030)
O4': (-68.667,11.019,-96.831)
C8: (-69.261,14.016,-98.374)
C2: (-67.009,14.402,-94.664)
C6: (-66.987,15.968,-96.551)
C5: (-67.906,15.066,-97.127)
C4: (-68.261,13.936,-96.424)
P: (-68.266,9.412,-101.055)
C4': (-69.082,9.742,-97.384)
C2': (-70.644,11.426,-98.050)
O2': (-71.970,11.871,-97.837)
N1: (-66.589,15.552,-95.289)
N2: (-66.501,14.174,-93.434)
N3: (-67.857,13.542,-95.201)
N7: (-68.549,15.106,-98.352)
N9: (-69.116,13.254,-97.242)
O5': (-68.184,10.083,-99.614)
O3': (-71.403,9.544,-96.836)
Image (generated by PyMOL):
PyMOL image
show in jmol