ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A587:A283

Extra

PDB:
ATOM 1 O3' A A 586 120.973 86.047 7.250 1.00 37.74 O
ATOM 2 P A A 587 121.910 87.231 7.794 1.00 39.38 P
ATOM 3 OP1 A A 587 121.537 87.590 9.187 1.00 40.90 O
ATOM 4 OP2 A A 587 121.907 88.265 6.725 1.00 42.17 O
ATOM 5 O5' A A 587 123.338 86.572 7.887 1.00 39.44 O
ATOM 6 C5' A A 587 123.595 85.526 8.831 1.00 39.00 C
ATOM 7 C4' A A 587 125.016 85.043 8.702 1.00 38.31 C
ATOM 8 O4' A A 587 125.209 84.439 7.401 1.00 37.54 O
ATOM 9 C3' A A 587 126.082 86.110 8.781 1.00 38.64 C
ATOM 10 O3' A A 587 126.387 86.431 10.115 1.00 41.46 O
ATOM 11 C2' A A 587 127.242 85.454 8.052 1.00 38.51 C
ATOM 12 O2' A A 587 127.929 84.530 8.872 1.00 39.46 O
ATOM 13 C1' A A 587 126.516 84.698 6.941 1.00 37.04 C
ATOM 14 N9 A A 587 126.405 85.512 5.734 1.00 37.14 N
ATOM 15 C8 A A 587 125.290 86.151 5.248 1.00 36.19 C
ATOM 16 N7 A A 587 125.514 86.852 4.163 1.00 36.51 N
ATOM 17 C5 A A 587 126.866 86.651 3.909 1.00 36.21 C
ATOM 18 C6 A A 587 127.722 87.120 2.894 1.00 35.08 C
ATOM 19 N6 A A 587 127.336 87.937 1.912 1.00 36.00 N
ATOM 20 N1 A A 587 129.005 86.720 2.925 1.00 34.07 N
ATOM 21 C2 A A 587 129.399 85.912 3.913 1.00 35.57 C
ATOM 22 N3 A A 587 128.698 85.410 4.925 1.00 35.11 N
ATOM 23 C4 A A 587 127.423 85.820 4.864 1.00 36.66 C
ATOM 24 P G A 588 126.732 87.955 10.503 1.00 42.83 P
ATOM 25 OP1 G A 588 127.290 87.938 11.901 1.00 42.10 O
ATOM 26 OP2 G A 588 125.569 88.820 10.179 1.00 41.46 O
ATOM 27 O5' G A 588 127.904 88.300 9.508 1.00 42.74 O
TER

ATOM 1 O3' G B 282 128.687 87.981 -1.853 1.00 30.87 O
ATOM 2 P G B 283 129.505 89.250 -1.310 1.00 30.06 P
ATOM 3 OP1 G B 283 128.538 90.393 -1.256 1.00 30.42 O
ATOM 4 OP2 G B 283 130.745 89.344 -2.118 1.00 30.01 O
ATOM 5 O5' G B 283 129.860 88.855 0.161 1.00 27.92 O
ATOM 6 C5' G B 283 131.096 89.225 0.737 1.00 27.32 C
ATOM 7 C4' G B 283 131.730 88.019 1.363 1.00 28.24 C
ATOM 8 O4' G B 283 131.957 87.035 0.331 1.00 28.81 O
ATOM 9 C3' G B 283 133.096 88.261 1.968 1.00 28.93 C
ATOM 10 O3' G B 283 132.979 88.753 3.271 1.00 30.00 O
ATOM 11 C2' G B 283 133.745 86.891 1.875 1.00 29.00 C
ATOM 12 O2' G B 283 133.275 86.013 2.876 1.00 28.55 O
ATOM 13 C1' G B 283 133.215 86.408 0.528 1.00 28.84 C
ATOM 14 N9 G B 283 134.083 86.774 -0.595 1.00 30.53 N
ATOM 15 C8 G B 283 133.764 87.588 -1.663 1.00 29.28 C
ATOM 16 N7 G B 283 134.747 87.735 -2.510 1.00 31.17 N
ATOM 17 C5 G B 283 135.782 86.972 -1.975 1.00 31.50 C
ATOM 18 C6 G B 283 137.104 86.741 -2.451 1.00 30.70 C
ATOM 19 O6 G B 283 137.645 87.179 -3.470 1.00 31.75 O
ATOM 20 N1 G B 283 137.813 85.902 -1.603 1.00 29.81 N
ATOM 21 C2 G B 283 137.323 85.350 -0.449 1.00 30.25 C
ATOM 22 N2 G B 283 138.155 84.543 0.221 1.00 30.43 N
ATOM 23 N3 G B 283 136.104 85.562 0.013 1.00 31.62 N
ATOM 24 C4 G B 283 135.390 86.373 -0.795 1.00 30.96 C
ATOM 25 P U B 284 133.931 89.951 3.735 1.00 31.27 P
ATOM 26 OP1 U B 284 133.652 90.264 5.164 1.00 32.00 O
ATOM 27 OP2 U B 284 133.855 91.041 2.724 1.00 31.10 O
ATOM 28 O5' U B 284 135.334 89.272 3.682 1.00 30.09 O
TER

Atoms:
OP1: (121.537,87.590,9.187)
OP2: (121.907,88.265,6.725)
C3': (126.082,86.110,8.781)
C1': (126.516,84.698,6.941)
C5': (123.595,85.526,8.831)
O4': (125.209,84.439,7.401)
C8: (125.290,86.151,5.248)
O2': (127.929,84.530,8.872)
C6: (127.722,87.120,2.894)
C5: (126.866,86.651,3.909)
C4: (127.423,85.820,4.864)
P: (121.910,87.231,7.794)
C4': (125.016,85.043,8.702)
C2': (127.242,85.454,8.052)
C2: (129.399,85.912,3.913)
N1: (129.005,86.720,2.925)
N3: (128.698,85.410,4.925)
N6: (127.336,87.937,1.912)
N7: (125.514,86.852,4.163)
N9: (126.405,85.512,5.734)
O5': (123.338,86.572,7.887)
O3': (126.387,86.431,10.115)
OP1: (128.538,90.393,-1.256)
OP2: (130.745,89.344,-2.118)
C3': (133.096,88.261,1.968)
C1': (133.215,86.408,0.528)
C5': (131.096,89.225,0.737)
O6: (137.645,87.179,-3.470)
O4': (131.957,87.035,0.331)
C8: (133.764,87.588,-1.663)
C2: (137.323,85.350,-0.449)
C6: (137.104,86.741,-2.451)
C5: (135.782,86.972,-1.975)
C4: (135.390,86.373,-0.795)
P: (129.505,89.250,-1.310)
C4': (131.730,88.019,1.363)
C2': (133.745,86.891,1.875)
O2': (133.275,86.013,2.876)
N1: (137.813,85.902,-1.603)
N2: (138.155,84.543,0.221)
N3: (136.104,85.562,0.013)
N7: (134.747,87.735,-2.510)
N9: (134.083,86.774,-0.595)
O5': (129.860,88.855,0.161)
O3': (132.979,88.753,3.271)
Image (generated by PyMOL):
PyMOL image
show in jmol