Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A1219:A1252
Extra
PDB:
ATOM 1 O3' A A1218 153.055 59.981 -2.730 1.00 99.16 O
ATOM 2 P A A1219 153.549 60.636 -1.345 1.00 97.48 P
ATOM 3 OP1 A A1219 152.504 61.633 -0.984 1.00 89.30 O
ATOM 4 OP2 A A1219 154.965 61.066 -1.491 1.00 99.29 O
ATOM 5 O5' A A1219 153.506 59.447 -0.279 1.00100.53 O
ATOM 6 C5' A A1219 152.269 59.037 0.312 1.00101.95 C
ATOM 7 C4' A A1219 152.383 57.633 0.867 1.00106.39 C
ATOM 8 O4' A A1219 153.118 56.815 -0.088 1.00107.03 O
ATOM 9 C3' A A1219 153.146 57.471 2.180 1.00110.82 C
ATOM 10 O3' A A1219 152.316 57.725 3.320 1.00111.62 O
ATOM 11 C2' A A1219 153.649 56.024 2.106 1.00104.49 C
ATOM 12 O2' A A1219 152.742 55.035 2.562 1.00102.31 O
ATOM 13 C1' A A1219 153.899 55.853 0.605 1.00108.87 C
ATOM 14 N9 A A1219 155.316 56.043 0.269 1.00108.97 N
ATOM 15 C8 A A1219 155.974 57.193 -0.112 1.00107.11 C
ATOM 16 N7 A A1219 157.266 57.030 -0.282 1.00106.09 N
ATOM 17 C5 A A1219 157.470 55.680 -0.010 1.00106.35 C
ATOM 18 C6 A A1219 158.632 54.873 -0.008 1.00104.53 C
ATOM 19 N6 A A1219 159.852 55.320 -0.289 1.00107.49 N
ATOM 20 N1 A A1219 158.488 53.568 0.304 1.00104.15 N
ATOM 21 C2 A A1219 157.264 53.110 0.598 1.00104.33 C
ATOM 22 N3 A A1219 156.104 53.763 0.637 1.00106.23 N
ATOM 23 C4 A A1219 156.278 55.060 0.319 1.00108.15 C
ATOM 24 P G A1220 152.843 58.676 4.518 1.00107.14 P
ATOM 25 OP1 G A1220 151.667 59.413 5.046 1.00105.75 O
ATOM 26 OP2 G A1220 154.041 59.440 4.057 1.00101.08 O
ATOM 27 O5' G A1220 153.291 57.647 5.646 1.00 98.94 O
TER
ATOM 1 O3' C B1251 167.671 48.159 -0.679 1.00115.14 O
ATOM 2 P A B1252 166.990 47.971 -2.127 1.00111.41 P
ATOM 3 OP1 A B1252 165.511 47.982 -1.978 1.00115.75 O
ATOM 4 OP2 A B1252 167.653 46.798 -2.744 1.00106.45 O
ATOM 5 O5' A B1252 167.416 49.283 -2.930 1.00117.06 O
ATOM 6 C5' A B1252 167.651 49.265 -4.340 1.00115.35 C
ATOM 7 C4' A B1252 167.474 50.653 -4.912 1.00114.98 C
ATOM 8 O4' A B1252 166.101 51.059 -4.730 1.00114.36 O
ATOM 9 C3' A B1252 168.356 51.712 -4.257 1.00116.12 C
ATOM 10 O3' A B1252 169.562 51.907 -5.028 1.00113.34 O
ATOM 11 C2' A B1252 167.445 52.920 -3.999 1.00118.34 C
ATOM 12 O2' A B1252 167.578 54.018 -4.870 1.00120.93 O
ATOM 13 C1' A B1252 166.037 52.320 -4.109 1.00117.44 C
ATOM 14 N9 A B1252 165.228 52.168 -2.899 1.00119.00 N
ATOM 15 C8 A B1252 165.380 51.255 -1.883 1.00120.81 C
ATOM 16 N7 A B1252 164.417 51.290 -0.994 1.00119.65 N
ATOM 17 C5 A B1252 163.588 52.309 -1.438 1.00115.94 C
ATOM 18 C6 A B1252 162.380 52.825 -0.946 1.00113.16 C
ATOM 19 N6 A B1252 161.764 52.360 0.145 1.00107.94 N
ATOM 20 N1 A B1252 161.811 53.845 -1.626 1.00112.69 N
ATOM 21 C2 A B1252 162.424 54.304 -2.725 1.00114.17 C
ATOM 22 N3 A B1252 163.554 53.896 -3.290 1.00115.58 N
ATOM 23 C4 A B1252 164.092 52.881 -2.593 1.00115.96 C
ATOM 24 P A B1253 169.496 52.352 -6.585 1.00109.79 P
ATOM 25 OP1 A B1253 170.835 52.142 -7.183 1.00113.32 O
ATOM 26 OP2 A B1253 168.875 53.689 -6.672 1.00113.04 O
ATOM 27 O5' A B1253 168.490 51.295 -7.244 1.00111.03 O
TER
ATOM 2 P A A1219 153.549 60.636 -1.345 1.00 97.48 P
ATOM 3 OP1 A A1219 152.504 61.633 -0.984 1.00 89.30 O
ATOM 4 OP2 A A1219 154.965 61.066 -1.491 1.00 99.29 O
ATOM 5 O5' A A1219 153.506 59.447 -0.279 1.00100.53 O
ATOM 6 C5' A A1219 152.269 59.037 0.312 1.00101.95 C
ATOM 7 C4' A A1219 152.383 57.633 0.867 1.00106.39 C
ATOM 8 O4' A A1219 153.118 56.815 -0.088 1.00107.03 O
ATOM 9 C3' A A1219 153.146 57.471 2.180 1.00110.82 C
ATOM 10 O3' A A1219 152.316 57.725 3.320 1.00111.62 O
ATOM 11 C2' A A1219 153.649 56.024 2.106 1.00104.49 C
ATOM 12 O2' A A1219 152.742 55.035 2.562 1.00102.31 O
ATOM 13 C1' A A1219 153.899 55.853 0.605 1.00108.87 C
ATOM 14 N9 A A1219 155.316 56.043 0.269 1.00108.97 N
ATOM 15 C8 A A1219 155.974 57.193 -0.112 1.00107.11 C
ATOM 16 N7 A A1219 157.266 57.030 -0.282 1.00106.09 N
ATOM 17 C5 A A1219 157.470 55.680 -0.010 1.00106.35 C
ATOM 18 C6 A A1219 158.632 54.873 -0.008 1.00104.53 C
ATOM 19 N6 A A1219 159.852 55.320 -0.289 1.00107.49 N
ATOM 20 N1 A A1219 158.488 53.568 0.304 1.00104.15 N
ATOM 21 C2 A A1219 157.264 53.110 0.598 1.00104.33 C
ATOM 22 N3 A A1219 156.104 53.763 0.637 1.00106.23 N
ATOM 23 C4 A A1219 156.278 55.060 0.319 1.00108.15 C
ATOM 24 P G A1220 152.843 58.676 4.518 1.00107.14 P
ATOM 25 OP1 G A1220 151.667 59.413 5.046 1.00105.75 O
ATOM 26 OP2 G A1220 154.041 59.440 4.057 1.00101.08 O
ATOM 27 O5' G A1220 153.291 57.647 5.646 1.00 98.94 O
TER
ATOM 1 O3' C B1251 167.671 48.159 -0.679 1.00115.14 O
ATOM 2 P A B1252 166.990 47.971 -2.127 1.00111.41 P
ATOM 3 OP1 A B1252 165.511 47.982 -1.978 1.00115.75 O
ATOM 4 OP2 A B1252 167.653 46.798 -2.744 1.00106.45 O
ATOM 5 O5' A B1252 167.416 49.283 -2.930 1.00117.06 O
ATOM 6 C5' A B1252 167.651 49.265 -4.340 1.00115.35 C
ATOM 7 C4' A B1252 167.474 50.653 -4.912 1.00114.98 C
ATOM 8 O4' A B1252 166.101 51.059 -4.730 1.00114.36 O
ATOM 9 C3' A B1252 168.356 51.712 -4.257 1.00116.12 C
ATOM 10 O3' A B1252 169.562 51.907 -5.028 1.00113.34 O
ATOM 11 C2' A B1252 167.445 52.920 -3.999 1.00118.34 C
ATOM 12 O2' A B1252 167.578 54.018 -4.870 1.00120.93 O
ATOM 13 C1' A B1252 166.037 52.320 -4.109 1.00117.44 C
ATOM 14 N9 A B1252 165.228 52.168 -2.899 1.00119.00 N
ATOM 15 C8 A B1252 165.380 51.255 -1.883 1.00120.81 C
ATOM 16 N7 A B1252 164.417 51.290 -0.994 1.00119.65 N
ATOM 17 C5 A B1252 163.588 52.309 -1.438 1.00115.94 C
ATOM 18 C6 A B1252 162.380 52.825 -0.946 1.00113.16 C
ATOM 19 N6 A B1252 161.764 52.360 0.145 1.00107.94 N
ATOM 20 N1 A B1252 161.811 53.845 -1.626 1.00112.69 N
ATOM 21 C2 A B1252 162.424 54.304 -2.725 1.00114.17 C
ATOM 22 N3 A B1252 163.554 53.896 -3.290 1.00115.58 N
ATOM 23 C4 A B1252 164.092 52.881 -2.593 1.00115.96 C
ATOM 24 P A B1253 169.496 52.352 -6.585 1.00109.79 P
ATOM 25 OP1 A B1253 170.835 52.142 -7.183 1.00113.32 O
ATOM 26 OP2 A B1253 168.875 53.689 -6.672 1.00113.04 O
ATOM 27 O5' A B1253 168.490 51.295 -7.244 1.00111.03 O
TER
Atoms:
OP1: (152.504,61.633,-0.984)
OP2: (154.965,61.066,-1.491)
C3': (153.146,57.471,2.180)
C1': (153.899,55.853,0.605)
C5': (152.269,59.037,0.312)
O4': (153.118,56.815,-0.088)
C8: (155.974,57.193,-0.112)
O2': (152.742,55.035,2.562)
C6: (158.632,54.873,-0.008)
C5: (157.470,55.680,-0.010)
C4: (156.278,55.060,0.319)
P: (153.549,60.636,-1.345)
C4': (152.383,57.633,0.867)
C2': (153.649,56.024,2.106)
C2: (157.264,53.110,0.598)
N1: (158.488,53.568,0.304)
N3: (156.104,53.763,0.637)
N6: (159.852,55.320,-0.289)
N7: (157.266,57.030,-0.282)
N9: (155.316,56.043,0.269)
O5': (153.506,59.447,-0.279)
O3': (152.316,57.725,3.320)
OP2: (154.965,61.066,-1.491)
C3': (153.146,57.471,2.180)
C1': (153.899,55.853,0.605)
C5': (152.269,59.037,0.312)
O4': (153.118,56.815,-0.088)
C8: (155.974,57.193,-0.112)
O2': (152.742,55.035,2.562)
C6: (158.632,54.873,-0.008)
C5: (157.470,55.680,-0.010)
C4: (156.278,55.060,0.319)
P: (153.549,60.636,-1.345)
C4': (152.383,57.633,0.867)
C2': (153.649,56.024,2.106)
C2: (157.264,53.110,0.598)
N1: (158.488,53.568,0.304)
N3: (156.104,53.763,0.637)
N6: (159.852,55.320,-0.289)
N7: (157.266,57.030,-0.282)
N9: (155.316,56.043,0.269)
O5': (153.506,59.447,-0.279)
O3': (152.316,57.725,3.320)
OP1: (165.511,47.982,-1.978)
OP2: (167.653,46.798,-2.744)
C3': (168.356,51.712,-4.257)
C1': (166.037,52.320,-4.109)
C5': (167.651,49.265,-4.340)
O4': (166.101,51.059,-4.730)
C8: (165.380,51.255,-1.883)
O2': (167.578,54.018,-4.870)
C6: (162.380,52.825,-0.946)
C5: (163.588,52.309,-1.438)
C4: (164.092,52.881,-2.593)
P: (166.990,47.971,-2.127)
C4': (167.474,50.653,-4.912)
C2': (167.445,52.920,-3.999)
C2: (162.424,54.304,-2.725)
N1: (161.811,53.845,-1.626)
N3: (163.554,53.896,-3.290)
N6: (161.764,52.360,0.145)
N7: (164.417,51.290,-0.994)
N9: (165.228,52.168,-2.899)
O5': (167.416,49.283,-2.930)
O3': (169.562,51.907,-5.028)
OP2: (167.653,46.798,-2.744)
C3': (168.356,51.712,-4.257)
C1': (166.037,52.320,-4.109)
C5': (167.651,49.265,-4.340)
O4': (166.101,51.059,-4.730)
C8: (165.380,51.255,-1.883)
O2': (167.578,54.018,-4.870)
C6: (162.380,52.825,-0.946)
C5: (163.588,52.309,-1.438)
C4: (164.092,52.881,-2.593)
P: (166.990,47.971,-2.127)
C4': (167.474,50.653,-4.912)
C2': (167.445,52.920,-3.999)
C2: (162.424,54.304,-2.725)
N1: (161.811,53.845,-1.626)
N3: (163.554,53.896,-3.290)
N6: (161.764,52.360,0.145)
N7: (164.417,51.290,-0.994)
N9: (165.228,52.168,-2.899)
O5': (167.416,49.283,-2.930)
O3': (169.562,51.907,-5.028)
Image (generated by PyMOL):