ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CQS:C7:A5

Extra

PDB:
ATOM 1 O3' U A 6 25.410 8.708 50.410 1.00 69.15 O
ATOM 2 P A A 7 24.809 10.053 49.822 1.00 73.01 P
ATOM 3 OP1 A A 7 25.163 10.998 50.896 1.00 68.24 O
ATOM 4 OP2 A A 7 23.398 9.873 49.448 1.00 66.30 O
ATOM 5 O5' A A 7 25.651 10.345 48.501 1.00 74.22 O
ATOM 6 C5' A A 7 26.313 11.584 48.358 1.00 71.15 C
ATOM 7 C4' A A 7 26.725 11.821 46.928 1.00 69.25 C
ATOM 8 O4' A A 7 27.677 12.904 46.933 1.00 66.82 O
ATOM 9 C3' A A 7 27.457 10.612 46.363 1.00 67.70 C
ATOM 10 O3' A A 7 27.261 10.536 44.955 1.00 70.01 O
ATOM 11 C2' A A 7 28.930 10.902 46.603 1.00 67.94 C
ATOM 12 O2' A A 7 29.754 10.507 45.539 1.00 69.64 O
ATOM 13 C1' A A 7 28.935 12.422 46.575 1.00 65.79 C
ATOM 14 N9 A A 7 29.945 13.074 47.365 1.00 63.53 N
ATOM 15 C8 A A 7 30.909 13.941 46.924 1.00 61.61 C
ATOM 16 N7 A A 7 31.739 14.317 47.854 1.00 61.38 N
ATOM 17 C5 A A 7 31.277 13.664 48.987 1.00 63.66 C
ATOM 18 C6 A A 7 31.732 13.622 50.307 1.00 64.26 C
ATOM 19 N6 A A 7 32.834 14.259 50.733 1.00 59.62 N
ATOM 20 N1 A A 7 31.022 12.881 51.193 1.00 65.28 N
ATOM 21 C2 A A 7 29.938 12.212 50.767 1.00 68.19 C
ATOM 22 N3 A A 7 29.425 12.157 49.548 1.00 66.76 N
ATOM 23 C4 A A 7 30.152 12.911 48.703 1.00 63.99 C
ATOM 24 P C A 8 25.995 9.799 44.332 1.00 74.65 P
ATOM 25 OP1 C A 8 25.896 8.421 44.855 1.00 76.20 O
ATOM 26 OP2 C A 8 26.117 10.027 42.874 1.00 72.25 O
ATOM 27 O5' C A 8 24.726 10.635 44.772 1.00 69.45 O
TER

ATOM 1 P G B 5 33.438 13.520 53.871 1.00 66.76 P
ATOM 2 OP1 G B 5 34.689 14.020 53.287 1.00 65.95 O
ATOM 3 OP2 G B 5 33.347 13.369 55.343 1.00 71.31 O
ATOM 4 O5' G B 5 33.076 12.146 53.109 1.00 69.22 O
ATOM 5 C5' G B 5 31.934 11.368 53.492 1.00 66.44 C
ATOM 6 C4' G B 5 32.004 9.933 52.967 1.00 67.20 C
ATOM 7 O4' G B 5 31.518 9.832 51.604 1.00 64.09 O
ATOM 8 C3' G B 5 33.438 9.403 52.947 1.00 66.96 C
ATOM 9 O3' G B 5 33.473 8.045 53.386 1.00 74.61 O
ATOM 10 C2' G B 5 33.909 9.577 51.509 1.00 67.36 C
ATOM 11 O2' G B 5 34.750 8.539 51.056 1.00 75.02 O
ATOM 12 C1' G B 5 32.579 9.456 50.776 1.00 64.31 C
ATOM 13 N9 G B 5 32.406 9.947 49.428 1.00 65.60 N
ATOM 14 C8 G B 5 31.456 9.544 48.523 1.00 67.24 C
ATOM 15 N7 G B 5 31.607 10.091 47.347 1.00 65.82 N
ATOM 16 C5 G B 5 32.705 10.918 47.502 1.00 65.01 C
ATOM 17 C6 G B 5 33.373 11.770 46.573 1.00 64.86 C
ATOM 18 O6 G B 5 33.132 11.946 45.368 1.00 64.10 O
ATOM 19 N1 G B 5 34.428 12.444 47.165 1.00 64.35 N
ATOM 20 C2 G B 5 34.817 12.304 48.470 1.00 66.04 C
ATOM 21 N2 G B 5 35.848 13.046 48.866 1.00 65.52 N
ATOM 22 N3 G B 5 34.235 11.499 49.332 1.00 65.95 N
ATOM 23 C4 G B 5 33.198 10.855 48.785 1.00 65.23 C
ATOM 24 P U B 6 34.228 7.638 54.740 1.00 78.87 P
ATOM 25 OP1 U B 6 33.970 6.207 54.984 1.00 76.36 O
ATOM 26 OP2 U B 6 33.866 8.618 55.776 1.00 80.18 O
ATOM 27 O5' U B 6 35.765 7.786 54.364 1.00 74.25 O
TER

Atoms:
OP1: (25.163,10.998,50.896)
OP2: (23.398,9.873,49.448)
C3': (27.457,10.612,46.363)
C1': (28.935,12.422,46.575)
C5': (26.313,11.584,48.358)
O4': (27.677,12.904,46.933)
C8: (30.909,13.941,46.924)
O2': (29.754,10.507,45.539)
C6: (31.732,13.622,50.307)
C5: (31.277,13.664,48.987)
C4: (30.152,12.911,48.703)
P: (24.809,10.053,49.822)
C4': (26.725,11.821,46.928)
C2': (28.930,10.902,46.603)
C2: (29.938,12.212,50.767)
N1: (31.022,12.881,51.193)
N3: (29.425,12.157,49.548)
N6: (32.834,14.259,50.733)
N7: (31.739,14.317,47.854)
N9: (29.945,13.074,47.365)
O5': (25.651,10.345,48.501)
O3': (27.261,10.536,44.955)
OP1: (34.689,14.020,53.287)
OP2: (33.347,13.369,55.343)
C3': (33.438,9.403,52.947)
C1': (32.579,9.456,50.776)
C5': (31.934,11.368,53.492)
O6: (33.132,11.946,45.368)
O4': (31.518,9.832,51.604)
C8: (31.456,9.544,48.523)
C2: (34.817,12.304,48.470)
C6: (33.373,11.770,46.573)
C5: (32.705,10.918,47.502)
C4: (33.198,10.855,48.785)
P: (33.438,13.520,53.871)
C4': (32.004,9.933,52.967)
C2': (33.909,9.577,51.509)
O2': (34.750,8.539,51.056)
N1: (34.428,12.444,47.165)
N2: (35.848,13.046,48.866)
N3: (34.235,11.499,49.332)
N7: (31.607,10.091,47.347)
N9: (32.406,9.947,49.428)
O5': (33.076,12.146,53.109)
O3': (33.473,8.045,53.386)
Image (generated by PyMOL):
PyMOL image
show in jmol