Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A49:B59
Extra
PDB:
ATOM 1 O3' A A 48 -0.548 22.729 -9.517 1.00 27.52 O
ATOM 2 P A A 49 -0.797 24.315 -9.540 1.00 25.26 P
ATOM 3 OP1 A A 49 -0.859 24.810 -8.148 1.00 24.07 O
ATOM 4 OP2 A A 49 -1.910 24.580 -10.475 1.00 26.50 O
ATOM 5 O5' A A 49 0.556 24.864 -10.189 1.00 26.00 O
ATOM 6 C5' A A 49 0.815 24.670 -11.574 1.00 27.31 C
ATOM 7 C4' A A 49 2.234 25.092 -11.913 1.00 27.84 C
ATOM 8 O4' A A 49 2.348 26.533 -11.782 1.00 24.04 O
ATOM 9 C3' A A 49 3.309 24.509 -11.002 1.00 23.19 C
ATOM 10 O3' A A 49 4.522 24.361 -11.713 1.00 23.59 O
ATOM 11 C2' A A 49 3.456 25.580 -9.932 1.00 25.90 C
ATOM 12 O2' A A 49 4.736 25.588 -9.333 1.00 24.73 O
ATOM 13 C1' A A 49 3.273 26.844 -10.763 1.00 25.21 C
ATOM 14 N9 A A 49 2.734 27.938 -9.972 1.00 29.96 N
ATOM 15 C8 A A 49 1.509 27.995 -9.372 1.00 30.67 C
ATOM 16 N7 A A 49 1.298 29.113 -8.719 1.00 28.06 N
ATOM 17 C5 A A 49 2.467 29.831 -8.904 1.00 29.68 C
ATOM 18 C6 A A 49 2.880 31.101 -8.462 1.00 33.68 C
ATOM 19 N6 A A 49 2.117 31.898 -7.710 1.00 30.01 N
ATOM 20 N1 A A 49 4.110 31.518 -8.826 1.00 33.17 N
ATOM 21 C2 A A 49 4.870 30.715 -9.579 1.00 30.87 C
ATOM 22 N3 A A 49 4.591 29.502 -10.053 1.00 30.92 N
ATOM 23 C4 A A 49 3.363 29.119 -9.675 1.00 29.51 C
ATOM 24 P C A 50 5.003 22.918 -12.209 1.00 27.96 P
ATOM 25 OP1 C A 50 6.444 23.050 -12.499 1.00 27.59 O
ATOM 26 OP2 C A 50 4.063 22.435 -13.246 1.00 27.00 O
ATOM 27 O5' C A 50 4.848 21.997 -10.907 1.00 25.51 O
TER
ATOM 1 O3' U B 58 1.126 33.504 -4.570 1.00 30.02 O
ATOM 2 P G B 59 2.050 34.687 -5.129 1.00 32.22 P
ATOM 3 OP1 G B 59 1.973 34.650 -6.604 1.00 35.10 O
ATOM 4 OP2 G B 59 3.371 34.612 -4.463 1.00 29.02 O
ATOM 5 O5' G B 59 1.337 36.011 -4.596 1.00 27.21 O
ATOM 6 C5' G B 59 -0.026 36.319 -4.835 1.00 30.08 C
ATOM 7 C4' G B 59 -0.160 37.829 -4.745 1.00 29.05 C
ATOM 8 O4' G B 59 0.300 38.390 -5.995 1.00 29.91 O
ATOM 9 C3' G B 59 -1.558 38.386 -4.526 1.00 29.32 C
ATOM 10 O3' G B 59 -1.738 38.632 -3.143 1.00 30.34 O
ATOM 11 C2' G B 59 -1.529 39.724 -5.261 1.00 32.19 C
ATOM 12 O2' G B 59 -1.157 40.772 -4.388 1.00 32.29 O
ATOM 13 C1' G B 59 -0.447 39.546 -6.320 1.00 29.37 C
ATOM 14 N9 G B 59 -0.949 39.373 -7.678 1.00 33.67 N
ATOM 15 C8 G B 59 -0.689 40.190 -8.751 1.00 29.77 C
ATOM 16 N7 G B 59 -1.260 39.787 -9.850 1.00 31.21 N
ATOM 17 C5 G B 59 -1.941 38.632 -9.484 1.00 32.78 C
ATOM 18 C6 G B 59 -2.742 37.763 -10.261 1.00 33.52 C
ATOM 19 O6 G B 59 -3.014 37.849 -11.463 1.00 32.19 O
ATOM 20 N1 G B 59 -3.250 36.707 -9.510 1.00 34.85 N
ATOM 21 C2 G B 59 -3.009 36.517 -8.170 1.00 37.64 C
ATOM 22 N2 G B 59 -3.586 35.439 -7.620 1.00 32.18 N
ATOM 23 N3 G B 59 -2.260 37.326 -7.427 1.00 31.14 N
ATOM 24 C4 G B 59 -1.757 38.358 -8.148 1.00 31.41 C
ATOM 25 P C B 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 26 OP1 C B 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 27 OP2 C B 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 28 O5' C B 60 -1.684 37.664 -0.832 1.00 32.43 O
TER
ATOM 2 P A A 49 -0.797 24.315 -9.540 1.00 25.26 P
ATOM 3 OP1 A A 49 -0.859 24.810 -8.148 1.00 24.07 O
ATOM 4 OP2 A A 49 -1.910 24.580 -10.475 1.00 26.50 O
ATOM 5 O5' A A 49 0.556 24.864 -10.189 1.00 26.00 O
ATOM 6 C5' A A 49 0.815 24.670 -11.574 1.00 27.31 C
ATOM 7 C4' A A 49 2.234 25.092 -11.913 1.00 27.84 C
ATOM 8 O4' A A 49 2.348 26.533 -11.782 1.00 24.04 O
ATOM 9 C3' A A 49 3.309 24.509 -11.002 1.00 23.19 C
ATOM 10 O3' A A 49 4.522 24.361 -11.713 1.00 23.59 O
ATOM 11 C2' A A 49 3.456 25.580 -9.932 1.00 25.90 C
ATOM 12 O2' A A 49 4.736 25.588 -9.333 1.00 24.73 O
ATOM 13 C1' A A 49 3.273 26.844 -10.763 1.00 25.21 C
ATOM 14 N9 A A 49 2.734 27.938 -9.972 1.00 29.96 N
ATOM 15 C8 A A 49 1.509 27.995 -9.372 1.00 30.67 C
ATOM 16 N7 A A 49 1.298 29.113 -8.719 1.00 28.06 N
ATOM 17 C5 A A 49 2.467 29.831 -8.904 1.00 29.68 C
ATOM 18 C6 A A 49 2.880 31.101 -8.462 1.00 33.68 C
ATOM 19 N6 A A 49 2.117 31.898 -7.710 1.00 30.01 N
ATOM 20 N1 A A 49 4.110 31.518 -8.826 1.00 33.17 N
ATOM 21 C2 A A 49 4.870 30.715 -9.579 1.00 30.87 C
ATOM 22 N3 A A 49 4.591 29.502 -10.053 1.00 30.92 N
ATOM 23 C4 A A 49 3.363 29.119 -9.675 1.00 29.51 C
ATOM 24 P C A 50 5.003 22.918 -12.209 1.00 27.96 P
ATOM 25 OP1 C A 50 6.444 23.050 -12.499 1.00 27.59 O
ATOM 26 OP2 C A 50 4.063 22.435 -13.246 1.00 27.00 O
ATOM 27 O5' C A 50 4.848 21.997 -10.907 1.00 25.51 O
TER
ATOM 1 O3' U B 58 1.126 33.504 -4.570 1.00 30.02 O
ATOM 2 P G B 59 2.050 34.687 -5.129 1.00 32.22 P
ATOM 3 OP1 G B 59 1.973 34.650 -6.604 1.00 35.10 O
ATOM 4 OP2 G B 59 3.371 34.612 -4.463 1.00 29.02 O
ATOM 5 O5' G B 59 1.337 36.011 -4.596 1.00 27.21 O
ATOM 6 C5' G B 59 -0.026 36.319 -4.835 1.00 30.08 C
ATOM 7 C4' G B 59 -0.160 37.829 -4.745 1.00 29.05 C
ATOM 8 O4' G B 59 0.300 38.390 -5.995 1.00 29.91 O
ATOM 9 C3' G B 59 -1.558 38.386 -4.526 1.00 29.32 C
ATOM 10 O3' G B 59 -1.738 38.632 -3.143 1.00 30.34 O
ATOM 11 C2' G B 59 -1.529 39.724 -5.261 1.00 32.19 C
ATOM 12 O2' G B 59 -1.157 40.772 -4.388 1.00 32.29 O
ATOM 13 C1' G B 59 -0.447 39.546 -6.320 1.00 29.37 C
ATOM 14 N9 G B 59 -0.949 39.373 -7.678 1.00 33.67 N
ATOM 15 C8 G B 59 -0.689 40.190 -8.751 1.00 29.77 C
ATOM 16 N7 G B 59 -1.260 39.787 -9.850 1.00 31.21 N
ATOM 17 C5 G B 59 -1.941 38.632 -9.484 1.00 32.78 C
ATOM 18 C6 G B 59 -2.742 37.763 -10.261 1.00 33.52 C
ATOM 19 O6 G B 59 -3.014 37.849 -11.463 1.00 32.19 O
ATOM 20 N1 G B 59 -3.250 36.707 -9.510 1.00 34.85 N
ATOM 21 C2 G B 59 -3.009 36.517 -8.170 1.00 37.64 C
ATOM 22 N2 G B 59 -3.586 35.439 -7.620 1.00 32.18 N
ATOM 23 N3 G B 59 -2.260 37.326 -7.427 1.00 31.14 N
ATOM 24 C4 G B 59 -1.757 38.358 -8.148 1.00 31.41 C
ATOM 25 P C B 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 26 OP1 C B 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 27 OP2 C B 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 28 O5' C B 60 -1.684 37.664 -0.832 1.00 32.43 O
TER
Atoms:
OP1: (-0.859,24.810,-8.148)
OP2: (-1.910,24.580,-10.475)
C3': (3.309,24.509,-11.002)
C1': (3.273,26.844,-10.763)
C5': (0.815,24.670,-11.574)
O4': (2.348,26.533,-11.782)
C8: (1.509,27.995,-9.372)
O2': (4.736,25.588,-9.333)
C6: (2.880,31.101,-8.462)
C5: (2.467,29.831,-8.904)
C4: (3.363,29.119,-9.675)
P: (-0.797,24.315,-9.540)
C4': (2.234,25.092,-11.913)
C2': (3.456,25.580,-9.932)
C2: (4.870,30.715,-9.579)
N1: (4.110,31.518,-8.826)
N3: (4.591,29.502,-10.053)
N6: (2.117,31.898,-7.710)
N7: (1.298,29.113,-8.719)
N9: (2.734,27.938,-9.972)
O5': (0.556,24.864,-10.189)
O3': (4.522,24.361,-11.713)
OP2: (-1.910,24.580,-10.475)
C3': (3.309,24.509,-11.002)
C1': (3.273,26.844,-10.763)
C5': (0.815,24.670,-11.574)
O4': (2.348,26.533,-11.782)
C8: (1.509,27.995,-9.372)
O2': (4.736,25.588,-9.333)
C6: (2.880,31.101,-8.462)
C5: (2.467,29.831,-8.904)
C4: (3.363,29.119,-9.675)
P: (-0.797,24.315,-9.540)
C4': (2.234,25.092,-11.913)
C2': (3.456,25.580,-9.932)
C2: (4.870,30.715,-9.579)
N1: (4.110,31.518,-8.826)
N3: (4.591,29.502,-10.053)
N6: (2.117,31.898,-7.710)
N7: (1.298,29.113,-8.719)
N9: (2.734,27.938,-9.972)
O5': (0.556,24.864,-10.189)
O3': (4.522,24.361,-11.713)
OP1: (1.973,34.650,-6.604)
OP2: (3.371,34.612,-4.463)
C3': (-1.558,38.386,-4.526)
C1': (-0.447,39.546,-6.320)
C5': (-0.026,36.319,-4.835)
O6: (-3.014,37.849,-11.463)
O4': (0.300,38.390,-5.995)
C8: (-0.689,40.190,-8.751)
C2: (-3.009,36.517,-8.170)
C6: (-2.742,37.763,-10.261)
C5: (-1.941,38.632,-9.484)
C4: (-1.757,38.358,-8.148)
P: (2.050,34.687,-5.129)
C4': (-0.160,37.829,-4.745)
C2': (-1.529,39.724,-5.261)
O2': (-1.157,40.772,-4.388)
N1: (-3.250,36.707,-9.510)
N2: (-3.586,35.439,-7.620)
N3: (-2.260,37.326,-7.427)
N7: (-1.260,39.787,-9.850)
N9: (-0.949,39.373,-7.678)
O5': (1.337,36.011,-4.596)
O3': (-1.738,38.632,-3.143)
OP2: (3.371,34.612,-4.463)
C3': (-1.558,38.386,-4.526)
C1': (-0.447,39.546,-6.320)
C5': (-0.026,36.319,-4.835)
O6: (-3.014,37.849,-11.463)
O4': (0.300,38.390,-5.995)
C8: (-0.689,40.190,-8.751)
C2: (-3.009,36.517,-8.170)
C6: (-2.742,37.763,-10.261)
C5: (-1.941,38.632,-9.484)
C4: (-1.757,38.358,-8.148)
P: (2.050,34.687,-5.129)
C4': (-0.160,37.829,-4.745)
C2': (-1.529,39.724,-5.261)
O2': (-1.157,40.772,-4.388)
N1: (-3.250,36.707,-9.510)
N2: (-3.586,35.439,-7.620)
N3: (-2.260,37.326,-7.427)
N7: (-1.260,39.787,-9.850)
N9: (-0.949,39.373,-7.678)
O5': (1.337,36.011,-4.596)
O3': (-1.738,38.632,-3.143)
Image (generated by PyMOL):