Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A49:B59
Extra
PDB:
ATOM 1 O3' A A 48 -0.207 -32.760 17.954 1.00 20.76 O
ATOM 2 P A A 49 -0.604 -31.205 17.936 1.00 20.66 P
ATOM 3 OP1 A A 49 -0.754 -30.698 19.332 1.00 19.97 O
ATOM 4 OP2 A A 49 -1.747 -31.102 16.988 1.00 20.99 O
ATOM 5 O5' A A 49 0.662 -30.509 17.263 1.00 20.31 O
ATOM 6 C5' A A 49 1.023 -30.802 15.901 1.00 21.51 C
ATOM 7 C4' A A 49 2.451 -30.385 15.637 1.00 22.55 C
ATOM 8 O4' A A 49 2.544 -28.943 15.749 1.00 21.97 O
ATOM 9 C3' A A 49 3.467 -30.970 16.610 1.00 22.50 C
ATOM 10 O3' A A 49 4.682 -31.243 15.931 1.00 22.33 O
ATOM 11 C2' A A 49 3.662 -29.847 17.622 1.00 22.37 C
ATOM 12 O2' A A 49 4.943 -29.841 18.215 1.00 23.79 O
ATOM 13 C1' A A 49 3.446 -28.595 16.773 1.00 21.54 C
ATOM 14 N9 A A 49 2.841 -27.520 17.557 1.00 20.80 N
ATOM 15 C8 A A 49 1.586 -27.495 18.124 1.00 21.84 C
ATOM 16 N7 A A 49 1.338 -26.410 18.817 1.00 20.94 N
ATOM 17 C5 A A 49 2.503 -25.665 18.690 1.00 20.44 C
ATOM 18 C6 A A 49 2.885 -24.413 19.202 1.00 19.45 C
ATOM 19 N6 A A 49 2.111 -23.663 19.994 1.00 16.11 N
ATOM 20 N1 A A 49 4.111 -23.953 18.874 1.00 20.18 N
ATOM 21 C2 A A 49 4.898 -24.711 18.097 1.00 20.97 C
ATOM 22 N3 A A 49 4.657 -25.904 17.564 1.00 21.18 N
ATOM 23 C4 A A 49 3.429 -26.331 17.902 1.00 20.34 C
ATOM 24 P C A 50 4.989 -32.730 15.416 1.00 22.99 P
ATOM 25 OP1 C A 50 6.419 -32.795 15.016 1.00 24.07 O
ATOM 26 OP2 C A 50 3.939 -33.086 14.433 1.00 21.87 O
ATOM 27 O5' C A 50 4.818 -33.637 16.711 1.00 24.60 O
TER
ATOM 1 O3' U B 58 1.284 -22.159 22.886 1.00 26.06 O
ATOM 2 P G B 59 1.652 -20.728 22.263 1.00 28.62 P
ATOM 3 OP1 G B 59 1.533 -20.889 20.792 1.00 30.10 O
ATOM 4 OP2 G B 59 2.939 -20.337 22.832 1.00 26.75 O
ATOM 5 O5' G B 59 0.471 -19.764 22.741 1.00 30.45 O
ATOM 6 C5' G B 59 0.528 -18.344 22.493 1.00 34.23 C
ATOM 7 C4' G B 59 -0.847 -17.769 22.169 1.00 36.76 C
ATOM 8 O4' G B 59 -1.273 -18.159 20.836 1.00 39.26 O
ATOM 9 C3' G B 59 -2.025 -18.126 23.052 1.00 37.48 C
ATOM 10 O3' G B 59 -1.995 -17.257 24.177 1.00 34.84 O
ATOM 11 C2' G B 59 -3.228 -17.827 22.141 1.00 39.45 C
ATOM 12 O2' G B 59 -3.574 -16.448 22.105 1.00 40.03 O
ATOM 13 C1' G B 59 -2.695 -18.218 20.765 1.00 41.35 C
ATOM 14 N9 G B 59 -3.108 -19.522 20.238 1.00 44.99 N
ATOM 15 C8 G B 59 -2.306 -20.400 19.533 1.00 47.34 C
ATOM 16 N7 G B 59 -2.936 -21.464 19.124 1.00 49.46 N
ATOM 17 C5 G B 59 -4.233 -21.308 19.590 1.00 49.18 C
ATOM 18 C6 G B 59 -5.351 -22.156 19.444 1.00 49.73 C
ATOM 19 O6 G B 59 -5.413 -23.236 18.844 1.00 49.79 O
ATOM 20 N1 G B 59 -6.472 -21.643 20.069 1.00 49.87 N
ATOM 21 C2 G B 59 -6.513 -20.444 20.748 1.00 50.18 C
ATOM 22 N2 G B 59 -7.684 -20.107 21.288 1.00 51.31 N
ATOM 23 N3 G B 59 -5.472 -19.627 20.889 1.00 49.74 N
ATOM 24 C4 G B 59 -4.367 -20.118 20.291 1.00 47.74 C
ATOM 25 P C B 60 -2.726 -17.720 25.516 1.00 33.01 P
ATOM 26 OP1 C B 60 -2.870 -19.182 25.529 1.00 34.69 O
ATOM 27 OP2 C B 60 -3.936 -16.876 25.755 1.00 33.53 O
ATOM 28 O5' C B 60 -1.670 -17.402 26.658 1.00 32.51 O
TER
ATOM 2 P A A 49 -0.604 -31.205 17.936 1.00 20.66 P
ATOM 3 OP1 A A 49 -0.754 -30.698 19.332 1.00 19.97 O
ATOM 4 OP2 A A 49 -1.747 -31.102 16.988 1.00 20.99 O
ATOM 5 O5' A A 49 0.662 -30.509 17.263 1.00 20.31 O
ATOM 6 C5' A A 49 1.023 -30.802 15.901 1.00 21.51 C
ATOM 7 C4' A A 49 2.451 -30.385 15.637 1.00 22.55 C
ATOM 8 O4' A A 49 2.544 -28.943 15.749 1.00 21.97 O
ATOM 9 C3' A A 49 3.467 -30.970 16.610 1.00 22.50 C
ATOM 10 O3' A A 49 4.682 -31.243 15.931 1.00 22.33 O
ATOM 11 C2' A A 49 3.662 -29.847 17.622 1.00 22.37 C
ATOM 12 O2' A A 49 4.943 -29.841 18.215 1.00 23.79 O
ATOM 13 C1' A A 49 3.446 -28.595 16.773 1.00 21.54 C
ATOM 14 N9 A A 49 2.841 -27.520 17.557 1.00 20.80 N
ATOM 15 C8 A A 49 1.586 -27.495 18.124 1.00 21.84 C
ATOM 16 N7 A A 49 1.338 -26.410 18.817 1.00 20.94 N
ATOM 17 C5 A A 49 2.503 -25.665 18.690 1.00 20.44 C
ATOM 18 C6 A A 49 2.885 -24.413 19.202 1.00 19.45 C
ATOM 19 N6 A A 49 2.111 -23.663 19.994 1.00 16.11 N
ATOM 20 N1 A A 49 4.111 -23.953 18.874 1.00 20.18 N
ATOM 21 C2 A A 49 4.898 -24.711 18.097 1.00 20.97 C
ATOM 22 N3 A A 49 4.657 -25.904 17.564 1.00 21.18 N
ATOM 23 C4 A A 49 3.429 -26.331 17.902 1.00 20.34 C
ATOM 24 P C A 50 4.989 -32.730 15.416 1.00 22.99 P
ATOM 25 OP1 C A 50 6.419 -32.795 15.016 1.00 24.07 O
ATOM 26 OP2 C A 50 3.939 -33.086 14.433 1.00 21.87 O
ATOM 27 O5' C A 50 4.818 -33.637 16.711 1.00 24.60 O
TER
ATOM 1 O3' U B 58 1.284 -22.159 22.886 1.00 26.06 O
ATOM 2 P G B 59 1.652 -20.728 22.263 1.00 28.62 P
ATOM 3 OP1 G B 59 1.533 -20.889 20.792 1.00 30.10 O
ATOM 4 OP2 G B 59 2.939 -20.337 22.832 1.00 26.75 O
ATOM 5 O5' G B 59 0.471 -19.764 22.741 1.00 30.45 O
ATOM 6 C5' G B 59 0.528 -18.344 22.493 1.00 34.23 C
ATOM 7 C4' G B 59 -0.847 -17.769 22.169 1.00 36.76 C
ATOM 8 O4' G B 59 -1.273 -18.159 20.836 1.00 39.26 O
ATOM 9 C3' G B 59 -2.025 -18.126 23.052 1.00 37.48 C
ATOM 10 O3' G B 59 -1.995 -17.257 24.177 1.00 34.84 O
ATOM 11 C2' G B 59 -3.228 -17.827 22.141 1.00 39.45 C
ATOM 12 O2' G B 59 -3.574 -16.448 22.105 1.00 40.03 O
ATOM 13 C1' G B 59 -2.695 -18.218 20.765 1.00 41.35 C
ATOM 14 N9 G B 59 -3.108 -19.522 20.238 1.00 44.99 N
ATOM 15 C8 G B 59 -2.306 -20.400 19.533 1.00 47.34 C
ATOM 16 N7 G B 59 -2.936 -21.464 19.124 1.00 49.46 N
ATOM 17 C5 G B 59 -4.233 -21.308 19.590 1.00 49.18 C
ATOM 18 C6 G B 59 -5.351 -22.156 19.444 1.00 49.73 C
ATOM 19 O6 G B 59 -5.413 -23.236 18.844 1.00 49.79 O
ATOM 20 N1 G B 59 -6.472 -21.643 20.069 1.00 49.87 N
ATOM 21 C2 G B 59 -6.513 -20.444 20.748 1.00 50.18 C
ATOM 22 N2 G B 59 -7.684 -20.107 21.288 1.00 51.31 N
ATOM 23 N3 G B 59 -5.472 -19.627 20.889 1.00 49.74 N
ATOM 24 C4 G B 59 -4.367 -20.118 20.291 1.00 47.74 C
ATOM 25 P C B 60 -2.726 -17.720 25.516 1.00 33.01 P
ATOM 26 OP1 C B 60 -2.870 -19.182 25.529 1.00 34.69 O
ATOM 27 OP2 C B 60 -3.936 -16.876 25.755 1.00 33.53 O
ATOM 28 O5' C B 60 -1.670 -17.402 26.658 1.00 32.51 O
TER
Atoms:
OP1: (-0.754,-30.698,19.332)
OP2: (-1.747,-31.102,16.988)
C3': (3.467,-30.970,16.610)
C1': (3.446,-28.595,16.773)
C5': (1.023,-30.802,15.901)
O4': (2.544,-28.943,15.749)
C8: (1.586,-27.495,18.124)
O2': (4.943,-29.841,18.215)
C6: (2.885,-24.413,19.202)
C5: (2.503,-25.665,18.690)
C4: (3.429,-26.331,17.902)
P: (-0.604,-31.205,17.936)
C4': (2.451,-30.385,15.637)
C2': (3.662,-29.847,17.622)
C2: (4.898,-24.711,18.097)
N1: (4.111,-23.953,18.874)
N3: (4.657,-25.904,17.564)
N6: (2.111,-23.663,19.994)
N7: (1.338,-26.410,18.817)
N9: (2.841,-27.520,17.557)
O5': (0.662,-30.509,17.263)
O3': (4.682,-31.243,15.931)
OP2: (-1.747,-31.102,16.988)
C3': (3.467,-30.970,16.610)
C1': (3.446,-28.595,16.773)
C5': (1.023,-30.802,15.901)
O4': (2.544,-28.943,15.749)
C8: (1.586,-27.495,18.124)
O2': (4.943,-29.841,18.215)
C6: (2.885,-24.413,19.202)
C5: (2.503,-25.665,18.690)
C4: (3.429,-26.331,17.902)
P: (-0.604,-31.205,17.936)
C4': (2.451,-30.385,15.637)
C2': (3.662,-29.847,17.622)
C2: (4.898,-24.711,18.097)
N1: (4.111,-23.953,18.874)
N3: (4.657,-25.904,17.564)
N6: (2.111,-23.663,19.994)
N7: (1.338,-26.410,18.817)
N9: (2.841,-27.520,17.557)
O5': (0.662,-30.509,17.263)
O3': (4.682,-31.243,15.931)
OP1: (1.533,-20.889,20.792)
OP2: (2.939,-20.337,22.832)
C3': (-2.025,-18.126,23.052)
C1': (-2.695,-18.218,20.765)
C5': (0.528,-18.344,22.493)
O6: (-5.413,-23.236,18.844)
O4': (-1.273,-18.159,20.836)
C8: (-2.306,-20.400,19.533)
C2: (-6.513,-20.444,20.748)
C6: (-5.351,-22.156,19.444)
C5: (-4.233,-21.308,19.590)
C4: (-4.367,-20.118,20.291)
P: (1.652,-20.728,22.263)
C4': (-0.847,-17.769,22.169)
C2': (-3.228,-17.827,22.141)
O2': (-3.574,-16.448,22.105)
N1: (-6.472,-21.643,20.069)
N2: (-7.684,-20.107,21.288)
N3: (-5.472,-19.627,20.889)
N7: (-2.936,-21.464,19.124)
N9: (-3.108,-19.522,20.238)
O5': (0.471,-19.764,22.741)
O3': (-1.995,-17.257,24.177)
OP2: (2.939,-20.337,22.832)
C3': (-2.025,-18.126,23.052)
C1': (-2.695,-18.218,20.765)
C5': (0.528,-18.344,22.493)
O6: (-5.413,-23.236,18.844)
O4': (-1.273,-18.159,20.836)
C8: (-2.306,-20.400,19.533)
C2: (-6.513,-20.444,20.748)
C6: (-5.351,-22.156,19.444)
C5: (-4.233,-21.308,19.590)
C4: (-4.367,-20.118,20.291)
P: (1.652,-20.728,22.263)
C4': (-0.847,-17.769,22.169)
C2': (-3.228,-17.827,22.141)
O2': (-3.574,-16.448,22.105)
N1: (-6.472,-21.643,20.069)
N2: (-7.684,-20.107,21.288)
N3: (-5.472,-19.627,20.889)
N7: (-2.936,-21.464,19.124)
N9: (-3.108,-19.522,20.238)
O5': (0.471,-19.764,22.741)
O3': (-1.995,-17.257,24.177)
Image (generated by PyMOL):