ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIL:A80:A115

Extra

PDB:
ATOM 1 O3' G A 79 21.045 13.515 19.094 1.00 16.66 O
ATOM 2 P A A 80 20.317 13.076 20.453 1.00 17.62 P
ATOM 3 OP1 A A 80 20.456 11.612 20.648 1.00 15.72 O
ATOM 4 OP2 A A 80 18.974 13.692 20.435 1.00 16.45 O
ATOM 5 O5' A A 80 21.202 13.793 21.582 1.00 16.81 O
ATOM 6 C5' A A 80 21.091 15.202 21.806 1.00 16.49 C
ATOM 7 C4' A A 80 22.091 15.639 22.858 1.00 15.87 C
ATOM 8 O4' A A 80 23.421 15.663 22.279 1.00 15.61 O
ATOM 9 C3' A A 80 21.900 17.043 23.415 1.00 15.71 C
ATOM 10 O3' A A 80 20.947 17.051 24.477 1.00 15.63 O
ATOM 11 C2' A A 80 23.297 17.337 23.954 1.00 15.44 C
ATOM 12 O2' A A 80 23.479 16.876 25.281 1.00 16.41 O
ATOM 13 C1' A A 80 24.221 16.586 22.990 1.00 15.58 C
ATOM 14 N9 A A 80 24.866 17.546 22.096 1.00 15.59 N
ATOM 15 C8 A A 80 24.378 18.049 20.925 1.00 14.67 C
ATOM 16 N7 A A 80 25.162 18.932 20.356 1.00 15.71 N
ATOM 17 C5 A A 80 26.239 19.022 21.218 1.00 15.61 C
ATOM 18 C6 A A 80 27.423 19.790 21.189 1.00 15.72 C
ATOM 19 N6 A A 80 27.717 20.648 20.211 1.00 15.37 N
ATOM 20 N1 A A 80 28.294 19.643 22.212 1.00 15.82 N
ATOM 21 C2 A A 80 27.999 18.783 23.197 1.00 15.42 C
ATOM 22 N3 A A 80 26.917 18.018 23.339 1.00 15.77 N
ATOM 23 C4 A A 80 26.070 18.179 22.304 1.00 15.79 C
ATOM 24 P A A 81 19.525 17.787 24.383 1.00 15.31 P
ATOM 25 OP1 A A 81 19.060 17.980 25.779 1.00 15.47 O
ATOM 26 OP2 A A 81 18.679 17.029 23.433 1.00 14.75 O
ATOM 27 O5' A A 81 19.869 19.236 23.785 1.00 15.23 O
TER

ATOM 1 O3' G B 114 30.438 22.440 20.045 1.00 20.04 O
ATOM 2 P G B 115 29.922 23.878 19.569 1.00 19.80 P
ATOM 3 OP1 G B 115 28.597 24.094 20.186 1.00 20.62 O
ATOM 4 OP2 G B 115 30.076 23.966 18.098 1.00 19.40 O
ATOM 5 O5' G B 115 30.979 24.878 20.218 1.00 20.17 O
ATOM 6 C5' G B 115 31.063 25.006 21.631 1.00 19.59 C
ATOM 7 C4' G B 115 32.386 25.621 22.027 1.00 19.35 C
ATOM 8 O4' G B 115 33.457 24.741 21.601 1.00 18.55 O
ATOM 9 C3' G B 115 32.738 26.937 21.348 1.00 19.34 C
ATOM 10 O3' G B 115 32.030 28.069 21.881 1.00 19.66 O
ATOM 11 C2' G B 115 34.238 26.958 21.627 1.00 18.63 C
ATOM 12 O2' G B 115 34.564 27.252 22.976 1.00 18.76 O
ATOM 13 C1' G B 115 34.590 25.517 21.257 1.00 18.36 C
ATOM 14 N9 G B 115 34.870 25.393 19.825 1.00 17.82 N
ATOM 15 C8 G B 115 34.054 24.897 18.836 1.00 17.65 C
ATOM 16 N7 G B 115 34.590 24.936 17.645 1.00 17.47 N
ATOM 17 C5 G B 115 35.840 25.505 17.855 1.00 17.76 C
ATOM 18 C6 G B 115 36.881 25.804 16.943 1.00 17.50 C
ATOM 19 O6 G B 115 36.896 25.615 15.721 1.00 17.99 O
ATOM 20 N1 G B 115 37.992 26.377 17.576 1.00 17.90 N
ATOM 21 C2 G B 115 38.080 26.628 18.930 1.00 17.60 C
ATOM 22 N2 G B 115 39.214 27.186 19.381 1.00 17.58 N
ATOM 23 N3 G B 115 37.109 26.350 19.792 1.00 17.69 N
ATOM 24 C4 G B 115 36.026 25.792 19.193 1.00 17.81 C
ATOM 25 P G B 116 31.779 29.356 20.953 1.00 20.05 P
ATOM 26 OP1 G B 116 31.025 30.354 21.744 1.00 20.35 O
ATOM 27 OP2 G B 116 31.241 28.904 19.651 1.00 19.88 O
ATOM 28 O5' G B 116 33.261 29.915 20.708 1.00 20.11 O
TER

Atoms:
OP1: (20.456,11.612,20.648)
OP2: (18.974,13.692,20.435)
C3': (21.900,17.043,23.415)
C1': (24.221,16.586,22.990)
C5': (21.091,15.202,21.806)
O4': (23.421,15.663,22.279)
C8: (24.378,18.049,20.925)
O2': (23.479,16.876,25.281)
C6: (27.423,19.790,21.189)
C5: (26.239,19.022,21.218)
C4: (26.070,18.179,22.304)
P: (20.317,13.076,20.453)
C4': (22.091,15.639,22.858)
C2': (23.297,17.337,23.954)
C2: (27.999,18.783,23.197)
N1: (28.294,19.643,22.212)
N3: (26.917,18.018,23.339)
N6: (27.717,20.648,20.211)
N7: (25.162,18.932,20.356)
N9: (24.866,17.546,22.096)
O5': (21.202,13.793,21.582)
O3': (20.947,17.051,24.477)
OP1: (28.597,24.094,20.186)
OP2: (30.076,23.966,18.098)
C3': (32.738,26.937,21.348)
C1': (34.590,25.517,21.257)
C5': (31.063,25.006,21.631)
O6: (36.896,25.615,15.721)
O4': (33.457,24.741,21.601)
C8: (34.054,24.897,18.836)
C2: (38.080,26.628,18.930)
C6: (36.881,25.804,16.943)
C5: (35.840,25.505,17.855)
C4: (36.026,25.792,19.193)
P: (29.922,23.878,19.569)
C4': (32.386,25.621,22.027)
C2': (34.238,26.958,21.627)
O2': (34.564,27.252,22.976)
N1: (37.992,26.377,17.576)
N2: (39.214,27.186,19.381)
N3: (37.109,26.350,19.792)
N7: (34.590,24.936,17.645)
N9: (34.870,25.393,19.825)
O5': (30.979,24.878,20.218)
O3': (32.030,28.069,21.881)
Image (generated by PyMOL):
PyMOL image
show in jmol