Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X80:X115
Extra
PDB:
ATOM 1 O3' G A 79 21.049 13.491 19.129 1.00 11.11 O
ATOM 2 P A A 80 20.257 13.003 20.429 1.00 10.93 P
ATOM 3 OP1 A A 80 20.394 11.534 20.555 1.00 10.56 O
ATOM 4 OP2 A A 80 18.917 13.629 20.365 1.00 11.70 O
ATOM 5 O5' A A 80 21.063 13.693 21.627 1.00 11.09 O
ATOM 6 C5' A A 80 20.969 15.098 21.856 1.00 9.77 C
ATOM 7 C4' A A 80 22.026 15.515 22.856 1.00 9.23 C
ATOM 8 O4' A A 80 23.307 15.610 22.180 1.00 9.58 O
ATOM 9 C3' A A 80 21.843 16.893 23.471 1.00 9.14 C
ATOM 10 O3' A A 80 20.904 16.881 24.563 1.00 9.17 O
ATOM 11 C2' A A 80 23.264 17.170 23.956 1.00 8.62 C
ATOM 12 O2' A A 80 23.479 16.693 25.266 1.00 8.26 O
ATOM 13 C1' A A 80 24.156 16.462 22.921 1.00 8.53 C
ATOM 14 N9 A A 80 24.753 17.468 22.055 1.00 7.82 N
ATOM 15 C8 A A 80 24.221 17.974 20.904 1.00 7.17 C
ATOM 16 N7 A A 80 24.952 18.905 20.342 1.00 7.51 N
ATOM 17 C5 A A 80 26.043 19.026 21.190 1.00 7.78 C
ATOM 18 C6 A A 80 27.191 19.848 21.157 1.00 7.83 C
ATOM 19 N6 A A 80 27.405 20.740 20.191 1.00 7.29 N
ATOM 20 N1 A A 80 28.105 19.717 22.156 1.00 8.32 N
ATOM 21 C2 A A 80 27.869 18.820 23.124 1.00 7.72 C
ATOM 22 N3 A A 80 26.823 18.001 23.266 1.00 7.62 N
ATOM 23 C4 A A 80 25.936 18.151 22.260 1.00 7.89 C
ATOM 24 P A A 81 19.467 17.597 24.486 1.00 8.09 P
ATOM 25 OP1 A A 81 19.028 17.833 25.878 1.00 9.05 O
ATOM 26 OP2 A A 81 18.599 16.819 23.584 1.00 7.71 O
ATOM 27 O5' A A 81 19.802 19.034 23.867 1.00 8.18 O
TER
ATOM 1 O3' G B 114 30.400 22.404 20.130 1.00 11.09 O
ATOM 2 P G B 115 29.708 23.743 19.598 1.00 9.86 P
ATOM 3 OP1 G B 115 28.355 23.807 20.172 1.00 10.80 O
ATOM 4 OP2 G B 115 29.870 23.775 18.127 1.00 10.34 O
ATOM 5 O5' G B 115 30.608 24.894 20.235 1.00 10.01 O
ATOM 6 C5' G B 115 30.659 25.082 21.651 1.00 11.14 C
ATOM 7 C4' G B 115 32.002 25.630 22.109 1.00 11.29 C
ATOM 8 O4' G B 115 33.070 24.725 21.717 1.00 12.22 O
ATOM 9 C3' G B 115 32.445 26.942 21.484 1.00 12.25 C
ATOM 10 O3' G B 115 31.824 28.082 22.067 1.00 13.25 O
ATOM 11 C2' G B 115 33.942 26.891 21.782 1.00 12.37 C
ATOM 12 O2' G B 115 34.242 27.121 23.149 1.00 12.68 O
ATOM 13 C1' G B 115 34.239 25.455 21.385 1.00 11.85 C
ATOM 14 N9 G B 115 34.533 25.326 19.956 1.00 11.73 N
ATOM 15 C8 G B 115 33.698 24.843 18.978 1.00 10.86 C
ATOM 16 N7 G B 115 34.229 24.858 17.791 1.00 11.27 N
ATOM 17 C5 G B 115 35.502 25.382 17.985 1.00 11.49 C
ATOM 18 C6 G B 115 36.547 25.636 17.060 1.00 11.40 C
ATOM 19 O6 G B 115 36.547 25.429 15.846 1.00 12.01 O
ATOM 20 N1 G B 115 37.685 26.183 17.655 1.00 11.34 N
ATOM 21 C2 G B 115 37.790 26.449 19.003 1.00 11.65 C
ATOM 22 N2 G B 115 38.947 26.972 19.422 1.00 11.12 N
ATOM 23 N3 G B 115 36.822 26.208 19.884 1.00 11.83 N
ATOM 24 C4 G B 115 35.707 25.675 19.314 1.00 11.48 C
ATOM 25 P G B 116 31.682 29.423 21.206 1.00 13.18 P
ATOM 26 OP1 G B 116 30.992 30.419 22.057 1.00 13.30 O
ATOM 27 OP2 G B 116 31.140 29.056 19.881 1.00 13.13 O
ATOM 28 O5' G B 116 33.183 29.907 20.962 1.00 14.45 O
TER
ATOM 2 P A A 80 20.257 13.003 20.429 1.00 10.93 P
ATOM 3 OP1 A A 80 20.394 11.534 20.555 1.00 10.56 O
ATOM 4 OP2 A A 80 18.917 13.629 20.365 1.00 11.70 O
ATOM 5 O5' A A 80 21.063 13.693 21.627 1.00 11.09 O
ATOM 6 C5' A A 80 20.969 15.098 21.856 1.00 9.77 C
ATOM 7 C4' A A 80 22.026 15.515 22.856 1.00 9.23 C
ATOM 8 O4' A A 80 23.307 15.610 22.180 1.00 9.58 O
ATOM 9 C3' A A 80 21.843 16.893 23.471 1.00 9.14 C
ATOM 10 O3' A A 80 20.904 16.881 24.563 1.00 9.17 O
ATOM 11 C2' A A 80 23.264 17.170 23.956 1.00 8.62 C
ATOM 12 O2' A A 80 23.479 16.693 25.266 1.00 8.26 O
ATOM 13 C1' A A 80 24.156 16.462 22.921 1.00 8.53 C
ATOM 14 N9 A A 80 24.753 17.468 22.055 1.00 7.82 N
ATOM 15 C8 A A 80 24.221 17.974 20.904 1.00 7.17 C
ATOM 16 N7 A A 80 24.952 18.905 20.342 1.00 7.51 N
ATOM 17 C5 A A 80 26.043 19.026 21.190 1.00 7.78 C
ATOM 18 C6 A A 80 27.191 19.848 21.157 1.00 7.83 C
ATOM 19 N6 A A 80 27.405 20.740 20.191 1.00 7.29 N
ATOM 20 N1 A A 80 28.105 19.717 22.156 1.00 8.32 N
ATOM 21 C2 A A 80 27.869 18.820 23.124 1.00 7.72 C
ATOM 22 N3 A A 80 26.823 18.001 23.266 1.00 7.62 N
ATOM 23 C4 A A 80 25.936 18.151 22.260 1.00 7.89 C
ATOM 24 P A A 81 19.467 17.597 24.486 1.00 8.09 P
ATOM 25 OP1 A A 81 19.028 17.833 25.878 1.00 9.05 O
ATOM 26 OP2 A A 81 18.599 16.819 23.584 1.00 7.71 O
ATOM 27 O5' A A 81 19.802 19.034 23.867 1.00 8.18 O
TER
ATOM 1 O3' G B 114 30.400 22.404 20.130 1.00 11.09 O
ATOM 2 P G B 115 29.708 23.743 19.598 1.00 9.86 P
ATOM 3 OP1 G B 115 28.355 23.807 20.172 1.00 10.80 O
ATOM 4 OP2 G B 115 29.870 23.775 18.127 1.00 10.34 O
ATOM 5 O5' G B 115 30.608 24.894 20.235 1.00 10.01 O
ATOM 6 C5' G B 115 30.659 25.082 21.651 1.00 11.14 C
ATOM 7 C4' G B 115 32.002 25.630 22.109 1.00 11.29 C
ATOM 8 O4' G B 115 33.070 24.725 21.717 1.00 12.22 O
ATOM 9 C3' G B 115 32.445 26.942 21.484 1.00 12.25 C
ATOM 10 O3' G B 115 31.824 28.082 22.067 1.00 13.25 O
ATOM 11 C2' G B 115 33.942 26.891 21.782 1.00 12.37 C
ATOM 12 O2' G B 115 34.242 27.121 23.149 1.00 12.68 O
ATOM 13 C1' G B 115 34.239 25.455 21.385 1.00 11.85 C
ATOM 14 N9 G B 115 34.533 25.326 19.956 1.00 11.73 N
ATOM 15 C8 G B 115 33.698 24.843 18.978 1.00 10.86 C
ATOM 16 N7 G B 115 34.229 24.858 17.791 1.00 11.27 N
ATOM 17 C5 G B 115 35.502 25.382 17.985 1.00 11.49 C
ATOM 18 C6 G B 115 36.547 25.636 17.060 1.00 11.40 C
ATOM 19 O6 G B 115 36.547 25.429 15.846 1.00 12.01 O
ATOM 20 N1 G B 115 37.685 26.183 17.655 1.00 11.34 N
ATOM 21 C2 G B 115 37.790 26.449 19.003 1.00 11.65 C
ATOM 22 N2 G B 115 38.947 26.972 19.422 1.00 11.12 N
ATOM 23 N3 G B 115 36.822 26.208 19.884 1.00 11.83 N
ATOM 24 C4 G B 115 35.707 25.675 19.314 1.00 11.48 C
ATOM 25 P G B 116 31.682 29.423 21.206 1.00 13.18 P
ATOM 26 OP1 G B 116 30.992 30.419 22.057 1.00 13.30 O
ATOM 27 OP2 G B 116 31.140 29.056 19.881 1.00 13.13 O
ATOM 28 O5' G B 116 33.183 29.907 20.962 1.00 14.45 O
TER
Atoms:
OP1: (20.394,11.534,20.555)
OP2: (18.917,13.629,20.365)
C3': (21.843,16.893,23.471)
C1': (24.156,16.462,22.921)
C5': (20.969,15.098,21.856)
O4': (23.307,15.610,22.180)
C8: (24.221,17.974,20.904)
O2': (23.479,16.693,25.266)
C6: (27.191,19.848,21.157)
C5: (26.043,19.026,21.190)
C4: (25.936,18.151,22.260)
P: (20.257,13.003,20.429)
C4': (22.026,15.515,22.856)
C2': (23.264,17.170,23.956)
C2: (27.869,18.820,23.124)
N1: (28.105,19.717,22.156)
N3: (26.823,18.001,23.266)
N6: (27.405,20.740,20.191)
N7: (24.952,18.905,20.342)
N9: (24.753,17.468,22.055)
O5': (21.063,13.693,21.627)
O3': (20.904,16.881,24.563)
OP2: (18.917,13.629,20.365)
C3': (21.843,16.893,23.471)
C1': (24.156,16.462,22.921)
C5': (20.969,15.098,21.856)
O4': (23.307,15.610,22.180)
C8: (24.221,17.974,20.904)
O2': (23.479,16.693,25.266)
C6: (27.191,19.848,21.157)
C5: (26.043,19.026,21.190)
C4: (25.936,18.151,22.260)
P: (20.257,13.003,20.429)
C4': (22.026,15.515,22.856)
C2': (23.264,17.170,23.956)
C2: (27.869,18.820,23.124)
N1: (28.105,19.717,22.156)
N3: (26.823,18.001,23.266)
N6: (27.405,20.740,20.191)
N7: (24.952,18.905,20.342)
N9: (24.753,17.468,22.055)
O5': (21.063,13.693,21.627)
O3': (20.904,16.881,24.563)
OP1: (28.355,23.807,20.172)
OP2: (29.870,23.775,18.127)
C3': (32.445,26.942,21.484)
C1': (34.239,25.455,21.385)
C5': (30.659,25.082,21.651)
O6: (36.547,25.429,15.846)
O4': (33.070,24.725,21.717)
C8: (33.698,24.843,18.978)
C2: (37.790,26.449,19.003)
C6: (36.547,25.636,17.060)
C5: (35.502,25.382,17.985)
C4: (35.707,25.675,19.314)
P: (29.708,23.743,19.598)
C4': (32.002,25.630,22.109)
C2': (33.942,26.891,21.782)
O2': (34.242,27.121,23.149)
N1: (37.685,26.183,17.655)
N2: (38.947,26.972,19.422)
N3: (36.822,26.208,19.884)
N7: (34.229,24.858,17.791)
N9: (34.533,25.326,19.956)
O5': (30.608,24.894,20.235)
O3': (31.824,28.082,22.067)
OP2: (29.870,23.775,18.127)
C3': (32.445,26.942,21.484)
C1': (34.239,25.455,21.385)
C5': (30.659,25.082,21.651)
O6: (36.547,25.429,15.846)
O4': (33.070,24.725,21.717)
C8: (33.698,24.843,18.978)
C2: (37.790,26.449,19.003)
C6: (36.547,25.636,17.060)
C5: (35.502,25.382,17.985)
C4: (35.707,25.675,19.314)
P: (29.708,23.743,19.598)
C4': (32.002,25.630,22.109)
C2': (33.942,26.891,21.782)
O2': (34.242,27.121,23.149)
N1: (37.685,26.183,17.655)
N2: (38.947,26.972,19.422)
N3: (36.822,26.208,19.884)
N7: (34.229,24.858,17.791)
N9: (34.533,25.326,19.956)
O5': (30.608,24.894,20.235)
O3': (31.824,28.082,22.067)
Image (generated by PyMOL):