ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A440:A460

Extra

PDB:
ATOM 1 O3' G A 439 -10.033 18.835 92.503 1.00 51.06 O
ATOM 2 P A A 440 -9.173 18.677 93.847 1.00 65.92 P
ATOM 3 OP1 A A 440 -10.096 18.777 94.993 1.00 60.76 O
ATOM 4 OP2 A A 440 -8.003 19.576 93.756 1.00 63.39 O
ATOM 5 O5' A A 440 -8.612 17.179 93.757 1.00 81.39 O
ATOM 6 C5' A A 440 -7.557 16.876 92.845 1.00 77.24 C
ATOM 7 C4' A A 440 -7.275 15.388 92.803 1.00 59.33 C
ATOM 8 O4' A A 440 -7.307 14.869 94.154 1.00 63.57 O
ATOM 9 C3' A A 440 -8.282 14.578 92.013 1.00 68.52 C
ATOM 10 O3' A A 440 -7.617 13.532 91.329 1.00 78.95 O
ATOM 11 C2' A A 440 -9.240 14.065 93.087 1.00 73.64 C
ATOM 12 O2' A A 440 -9.804 12.801 92.785 1.00 69.45 O
ATOM 13 C1' A A 440 -8.343 13.931 94.308 1.00 77.16 C
ATOM 14 N9 A A 440 -9.057 14.222 95.545 1.00 71.53 N
ATOM 15 C8 A A 440 -9.287 15.454 96.076 1.00 70.27 C
ATOM 16 N7 A A 440 -9.966 15.426 97.197 1.00 77.83 N
ATOM 17 C5 A A 440 -10.205 14.084 97.418 1.00 68.77 C
ATOM 18 C6 A A 440 -10.879 13.402 98.449 1.00 69.31 C
ATOM 19 N6 A A 440 -11.453 14.029 99.482 1.00 67.59 N
ATOM 20 N1 A A 440 -10.934 12.052 98.370 1.00 75.45 N
ATOM 21 C2 A A 440 -10.353 11.443 97.327 1.00 73.55 C
ATOM 22 N3 A A 440 -9.691 11.983 96.303 1.00 68.21 N
ATOM 23 C4 A A 440 -9.652 13.323 96.406 1.00 68.71 C
ATOM 24 P A A 441 -7.161 13.702 89.800 1.00 81.57 P
ATOM 25 OP1 A A 441 -7.459 15.083 89.370 1.00 67.47 O
ATOM 26 OP2 A A 441 -7.672 12.537 89.022 1.00 75.54 O
ATOM 27 O5' A A 441 -5.582 13.553 89.937 1.00 72.31 O
TER

ATOM 1 O3' U B 459 -12.208 10.676 103.186 1.00 70.61 O
ATOM 2 P G B 460 -13.495 11.056 102.319 1.00 63.99 P
ATOM 3 OP1 G B 460 -14.671 11.035 103.223 1.00 58.43 O
ATOM 4 OP2 G B 460 -13.461 10.243 101.077 1.00 53.28 O
ATOM 5 O5' G B 460 -13.203 12.571 101.896 1.00 56.82 O
ATOM 6 C5' G B 460 -13.549 13.670 102.736 1.00 57.96 C
ATOM 7 C4' G B 460 -14.465 14.643 102.013 1.00 48.46 C
ATOM 8 O4' G B 460 -13.855 15.024 100.750 1.00 46.93 O
ATOM 9 C3' G B 460 -15.840 14.072 101.682 1.00 53.00 C
ATOM 10 O3' G B 460 -16.888 14.913 102.144 1.00 53.56 O
ATOM 11 C2' G B 460 -15.837 13.971 100.160 1.00 54.55 C
ATOM 12 O2' G B 460 -17.104 14.242 99.608 1.00 50.23 O
ATOM 13 C1' G B 460 -14.856 15.058 99.758 1.00 50.21 C
ATOM 14 N9 G B 460 -14.269 14.838 98.436 1.00 48.72 N
ATOM 15 C8 G B 460 -14.330 13.703 97.667 1.00 60.52 C
ATOM 16 N7 G B 460 -13.713 13.803 96.522 1.00 59.75 N
ATOM 17 C5 G B 460 -13.208 15.090 96.525 1.00 52.25 C
ATOM 18 C6 G B 460 -12.448 15.773 95.548 1.00 55.87 C
ATOM 19 O6 G B 460 -12.051 15.364 94.453 1.00 58.54 O
ATOM 20 N1 G B 460 -12.147 17.072 95.948 1.00 53.24 N
ATOM 21 C2 G B 460 -12.532 17.637 97.149 1.00 55.52 C
ATOM 22 N2 G B 460 -12.151 18.904 97.383 1.00 63.62 N
ATOM 23 N3 G B 460 -13.242 17.003 98.073 1.00 51.08 N
ATOM 24 C4 G B 460 -13.544 15.738 97.694 1.00 49.16 C
ATOM 25 P A B 461 -17.395 14.842 103.662 1.00 82.27 P
ATOM 26 OP1 A B 461 -16.265 14.342 104.473 1.00 65.91 O
ATOM 27 OP2 A B 461 -18.722 14.171 103.718 1.00 67.32 O
ATOM 28 O5' A B 461 -17.645 16.382 103.999 1.00 90.92 O
TER

Atoms:
OP1: (-10.096,18.777,94.993)
OP2: (-8.003,19.576,93.756)
C3': (-8.282,14.578,92.013)
C1': (-8.343,13.931,94.308)
C5': (-7.557,16.876,92.845)
O4': (-7.307,14.869,94.154)
C8: (-9.287,15.454,96.076)
O2': (-9.804,12.801,92.785)
C6: (-10.879,13.402,98.449)
C5: (-10.205,14.084,97.418)
C4: (-9.652,13.323,96.406)
P: (-9.173,18.677,93.847)
C4': (-7.275,15.388,92.803)
C2': (-9.240,14.065,93.087)
C2: (-10.353,11.443,97.327)
N1: (-10.934,12.052,98.370)
N3: (-9.691,11.983,96.303)
N6: (-11.453,14.029,99.482)
N7: (-9.966,15.426,97.197)
N9: (-9.057,14.222,95.545)
O5': (-8.612,17.179,93.757)
O3': (-7.617,13.532,91.329)
OP1: (-14.671,11.035,103.223)
OP2: (-13.461,10.243,101.077)
C3': (-15.840,14.072,101.682)
C1': (-14.856,15.058,99.758)
C5': (-13.549,13.670,102.736)
O6: (-12.051,15.364,94.453)
O4': (-13.855,15.024,100.750)
C8: (-14.330,13.703,97.667)
C2: (-12.532,17.637,97.149)
C6: (-12.448,15.773,95.548)
C5: (-13.208,15.090,96.525)
C4: (-13.544,15.738,97.694)
P: (-13.495,11.056,102.319)
C4': (-14.465,14.643,102.013)
C2': (-15.837,13.971,100.160)
O2': (-17.104,14.242,99.608)
N1: (-12.147,17.072,95.948)
N2: (-12.151,18.904,97.383)
N3: (-13.242,17.003,98.073)
N7: (-13.713,13.803,96.522)
N9: (-14.269,14.838,98.436)
O5': (-13.203,12.571,101.896)
O3': (-16.888,14.913,102.144)
Image (generated by PyMOL):
PyMOL image
show in jmol