Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1743:A1723
Extra
PDB:
ATOM 1 O3' U A1742 53.016 -2.629 -34.957 1.00 43.01 O
ATOM 2 P A A1743 52.987 -1.105 -34.488 1.00 48.29 P
ATOM 3 OP1 A A1743 51.696 -0.829 -33.811 1.00 47.63 O
ATOM 4 OP2 A A1743 53.356 -0.317 -35.686 1.00 49.85 O
ATOM 5 O5' A A1743 54.211 -1.024 -33.456 1.00 44.44 O
ATOM 6 C5' A A1743 54.340 -1.947 -32.356 1.00 43.60 C
ATOM 7 C4' A A1743 55.638 -1.698 -31.575 1.00 43.67 C
ATOM 8 O4' A A1743 56.730 -2.464 -32.152 1.00 38.65 O
ATOM 9 C3' A A1743 56.076 -0.231 -31.544 1.00 47.24 C
ATOM 10 O3' A A1743 56.613 0.319 -30.319 1.00 46.72 O
ATOM 11 C2' A A1743 57.123 -0.177 -32.659 1.00 48.83 C
ATOM 12 O2' A A1743 58.138 0.781 -32.465 1.00 50.77 O
ATOM 13 C1' A A1743 57.700 -1.595 -32.697 1.00 42.39 C
ATOM 14 N9 A A1743 57.900 -1.986 -34.094 1.00 42.09 N
ATOM 15 C8 A A1743 56.945 -1.878 -35.069 1.00 43.58 C
ATOM 16 N7 A A1743 57.327 -2.305 -36.243 1.00 46.07 N
ATOM 17 C5 A A1743 58.624 -2.719 -36.043 1.00 46.65 C
ATOM 18 C6 A A1743 59.564 -3.282 -36.910 1.00 48.82 C
ATOM 19 N6 A A1743 59.322 -3.519 -38.214 1.00 43.19 N
ATOM 20 N1 A A1743 60.779 -3.596 -36.397 1.00 50.56 N
ATOM 21 C2 A A1743 61.014 -3.340 -35.097 1.00 51.33 C
ATOM 22 N3 A A1743 60.205 -2.807 -34.181 1.00 52.24 N
ATOM 23 C4 A A1743 59.005 -2.520 -34.720 1.00 46.42 C
ATOM 24 P U A1744 57.010 -0.621 -29.080 1.00 54.32 P
ATOM 25 OP1 U A1744 57.530 0.257 -27.995 1.00 45.31 O
ATOM 26 OP2 U A1744 57.889 -1.686 -29.646 1.00 45.42 O
ATOM 27 O5' U A1744 55.652 -1.284 -28.568 1.00 47.15 O
TER
ATOM 1 O3' U B1722 63.174 -6.318 -40.350 1.00 46.80 O
ATOM 2 P G B1723 62.883 -4.819 -40.849 1.00 59.68 P
ATOM 3 OP1 G B1723 64.133 -4.288 -41.461 1.00 54.49 O
ATOM 4 OP2 G B1723 62.173 -4.020 -39.813 1.00 53.34 O
ATOM 5 O5' G B1723 61.815 -5.061 -41.992 1.00 57.51 O
ATOM 6 C5' G B1723 60.470 -5.359 -41.673 1.00 49.69 C
ATOM 7 C4' G B1723 59.591 -4.232 -42.115 1.00 44.97 C
ATOM 8 O4' G B1723 59.041 -3.608 -40.938 1.00 40.98 O
ATOM 9 C3' G B1723 60.281 -3.080 -42.848 1.00 46.61 C
ATOM 10 O3' G B1723 60.680 -3.310 -44.231 1.00 43.63 O
ATOM 11 C2' G B1723 59.396 -1.875 -42.559 1.00 51.10 C
ATOM 12 O2' G B1723 58.469 -1.646 -43.586 1.00 56.12 O
ATOM 13 C1' G B1723 58.694 -2.282 -41.250 1.00 48.15 C
ATOM 14 N9 G B1723 58.914 -1.437 -40.084 1.00 47.28 N
ATOM 15 C8 G B1723 60.083 -0.840 -39.688 1.00 53.69 C
ATOM 16 N7 G B1723 59.943 -0.091 -38.627 1.00 49.00 N
ATOM 17 C5 G B1723 58.603 -0.217 -38.295 1.00 43.09 C
ATOM 18 C6 G B1723 57.859 0.377 -37.250 1.00 44.20 C
ATOM 19 O6 G B1723 58.246 1.154 -36.371 1.00 52.46 O
ATOM 20 N1 G B1723 56.526 -0.006 -37.290 1.00 39.73 N
ATOM 21 C2 G B1723 55.976 -0.853 -38.212 1.00 44.11 C
ATOM 22 N2 G B1723 54.657 -1.087 -38.082 1.00 49.00 N
ATOM 23 N3 G B1723 56.661 -1.424 -39.190 1.00 46.09 N
ATOM 24 C4 G B1723 57.958 -1.056 -39.175 1.00 42.08 C
ATOM 25 P C B1724 59.621 -3.715 -45.391 1.00 41.50 P
ATOM 26 OP1 C B1724 60.238 -4.848 -46.104 1.00 51.25 O
ATOM 27 OP2 C B1724 59.220 -2.524 -46.167 1.00 43.89 O
ATOM 28 O5' C B1724 58.373 -4.326 -44.614 1.00 47.97 O
TER
ATOM 2 P A A1743 52.987 -1.105 -34.488 1.00 48.29 P
ATOM 3 OP1 A A1743 51.696 -0.829 -33.811 1.00 47.63 O
ATOM 4 OP2 A A1743 53.356 -0.317 -35.686 1.00 49.85 O
ATOM 5 O5' A A1743 54.211 -1.024 -33.456 1.00 44.44 O
ATOM 6 C5' A A1743 54.340 -1.947 -32.356 1.00 43.60 C
ATOM 7 C4' A A1743 55.638 -1.698 -31.575 1.00 43.67 C
ATOM 8 O4' A A1743 56.730 -2.464 -32.152 1.00 38.65 O
ATOM 9 C3' A A1743 56.076 -0.231 -31.544 1.00 47.24 C
ATOM 10 O3' A A1743 56.613 0.319 -30.319 1.00 46.72 O
ATOM 11 C2' A A1743 57.123 -0.177 -32.659 1.00 48.83 C
ATOM 12 O2' A A1743 58.138 0.781 -32.465 1.00 50.77 O
ATOM 13 C1' A A1743 57.700 -1.595 -32.697 1.00 42.39 C
ATOM 14 N9 A A1743 57.900 -1.986 -34.094 1.00 42.09 N
ATOM 15 C8 A A1743 56.945 -1.878 -35.069 1.00 43.58 C
ATOM 16 N7 A A1743 57.327 -2.305 -36.243 1.00 46.07 N
ATOM 17 C5 A A1743 58.624 -2.719 -36.043 1.00 46.65 C
ATOM 18 C6 A A1743 59.564 -3.282 -36.910 1.00 48.82 C
ATOM 19 N6 A A1743 59.322 -3.519 -38.214 1.00 43.19 N
ATOM 20 N1 A A1743 60.779 -3.596 -36.397 1.00 50.56 N
ATOM 21 C2 A A1743 61.014 -3.340 -35.097 1.00 51.33 C
ATOM 22 N3 A A1743 60.205 -2.807 -34.181 1.00 52.24 N
ATOM 23 C4 A A1743 59.005 -2.520 -34.720 1.00 46.42 C
ATOM 24 P U A1744 57.010 -0.621 -29.080 1.00 54.32 P
ATOM 25 OP1 U A1744 57.530 0.257 -27.995 1.00 45.31 O
ATOM 26 OP2 U A1744 57.889 -1.686 -29.646 1.00 45.42 O
ATOM 27 O5' U A1744 55.652 -1.284 -28.568 1.00 47.15 O
TER
ATOM 1 O3' U B1722 63.174 -6.318 -40.350 1.00 46.80 O
ATOM 2 P G B1723 62.883 -4.819 -40.849 1.00 59.68 P
ATOM 3 OP1 G B1723 64.133 -4.288 -41.461 1.00 54.49 O
ATOM 4 OP2 G B1723 62.173 -4.020 -39.813 1.00 53.34 O
ATOM 5 O5' G B1723 61.815 -5.061 -41.992 1.00 57.51 O
ATOM 6 C5' G B1723 60.470 -5.359 -41.673 1.00 49.69 C
ATOM 7 C4' G B1723 59.591 -4.232 -42.115 1.00 44.97 C
ATOM 8 O4' G B1723 59.041 -3.608 -40.938 1.00 40.98 O
ATOM 9 C3' G B1723 60.281 -3.080 -42.848 1.00 46.61 C
ATOM 10 O3' G B1723 60.680 -3.310 -44.231 1.00 43.63 O
ATOM 11 C2' G B1723 59.396 -1.875 -42.559 1.00 51.10 C
ATOM 12 O2' G B1723 58.469 -1.646 -43.586 1.00 56.12 O
ATOM 13 C1' G B1723 58.694 -2.282 -41.250 1.00 48.15 C
ATOM 14 N9 G B1723 58.914 -1.437 -40.084 1.00 47.28 N
ATOM 15 C8 G B1723 60.083 -0.840 -39.688 1.00 53.69 C
ATOM 16 N7 G B1723 59.943 -0.091 -38.627 1.00 49.00 N
ATOM 17 C5 G B1723 58.603 -0.217 -38.295 1.00 43.09 C
ATOM 18 C6 G B1723 57.859 0.377 -37.250 1.00 44.20 C
ATOM 19 O6 G B1723 58.246 1.154 -36.371 1.00 52.46 O
ATOM 20 N1 G B1723 56.526 -0.006 -37.290 1.00 39.73 N
ATOM 21 C2 G B1723 55.976 -0.853 -38.212 1.00 44.11 C
ATOM 22 N2 G B1723 54.657 -1.087 -38.082 1.00 49.00 N
ATOM 23 N3 G B1723 56.661 -1.424 -39.190 1.00 46.09 N
ATOM 24 C4 G B1723 57.958 -1.056 -39.175 1.00 42.08 C
ATOM 25 P C B1724 59.621 -3.715 -45.391 1.00 41.50 P
ATOM 26 OP1 C B1724 60.238 -4.848 -46.104 1.00 51.25 O
ATOM 27 OP2 C B1724 59.220 -2.524 -46.167 1.00 43.89 O
ATOM 28 O5' C B1724 58.373 -4.326 -44.614 1.00 47.97 O
TER
Atoms:
OP1: (51.696,-0.829,-33.811)
OP2: (53.356,-0.317,-35.686)
C3': (56.076,-0.231,-31.544)
C1': (57.700,-1.595,-32.697)
C5': (54.340,-1.947,-32.356)
O4': (56.730,-2.464,-32.152)
C8: (56.945,-1.878,-35.069)
O2': (58.138,0.781,-32.465)
C6: (59.564,-3.282,-36.910)
C5: (58.624,-2.719,-36.043)
C4: (59.005,-2.520,-34.720)
P: (52.987,-1.105,-34.488)
C4': (55.638,-1.698,-31.575)
C2': (57.123,-0.177,-32.659)
C2: (61.014,-3.340,-35.097)
N1: (60.779,-3.596,-36.397)
N3: (60.205,-2.807,-34.181)
N6: (59.322,-3.519,-38.214)
N7: (57.327,-2.305,-36.243)
N9: (57.900,-1.986,-34.094)
O5': (54.211,-1.024,-33.456)
O3': (56.613,0.319,-30.319)
OP2: (53.356,-0.317,-35.686)
C3': (56.076,-0.231,-31.544)
C1': (57.700,-1.595,-32.697)
C5': (54.340,-1.947,-32.356)
O4': (56.730,-2.464,-32.152)
C8: (56.945,-1.878,-35.069)
O2': (58.138,0.781,-32.465)
C6: (59.564,-3.282,-36.910)
C5: (58.624,-2.719,-36.043)
C4: (59.005,-2.520,-34.720)
P: (52.987,-1.105,-34.488)
C4': (55.638,-1.698,-31.575)
C2': (57.123,-0.177,-32.659)
C2: (61.014,-3.340,-35.097)
N1: (60.779,-3.596,-36.397)
N3: (60.205,-2.807,-34.181)
N6: (59.322,-3.519,-38.214)
N7: (57.327,-2.305,-36.243)
N9: (57.900,-1.986,-34.094)
O5': (54.211,-1.024,-33.456)
O3': (56.613,0.319,-30.319)
OP1: (64.133,-4.288,-41.461)
OP2: (62.173,-4.020,-39.813)
C3': (60.281,-3.080,-42.848)
C1': (58.694,-2.282,-41.250)
C5': (60.470,-5.359,-41.673)
O6: (58.246,1.154,-36.371)
O4': (59.041,-3.608,-40.938)
C8: (60.083,-0.840,-39.688)
C2: (55.976,-0.853,-38.212)
C6: (57.859,0.377,-37.250)
C5: (58.603,-0.217,-38.295)
C4: (57.958,-1.056,-39.175)
P: (62.883,-4.819,-40.849)
C4': (59.591,-4.232,-42.115)
C2': (59.396,-1.875,-42.559)
O2': (58.469,-1.646,-43.586)
N1: (56.526,-0.006,-37.290)
N2: (54.657,-1.087,-38.082)
N3: (56.661,-1.424,-39.190)
N7: (59.943,-0.091,-38.627)
N9: (58.914,-1.437,-40.084)
O5': (61.815,-5.061,-41.992)
O3': (60.680,-3.310,-44.231)
OP2: (62.173,-4.020,-39.813)
C3': (60.281,-3.080,-42.848)
C1': (58.694,-2.282,-41.250)
C5': (60.470,-5.359,-41.673)
O6: (58.246,1.154,-36.371)
O4': (59.041,-3.608,-40.938)
C8: (60.083,-0.840,-39.688)
C2: (55.976,-0.853,-38.212)
C6: (57.859,0.377,-37.250)
C5: (58.603,-0.217,-38.295)
C4: (57.958,-1.056,-39.175)
P: (62.883,-4.819,-40.849)
C4': (59.591,-4.232,-42.115)
C2': (59.396,-1.875,-42.559)
O2': (58.469,-1.646,-43.586)
N1: (56.526,-0.006,-37.290)
N2: (54.657,-1.087,-38.082)
N3: (56.661,-1.424,-39.190)
N7: (59.943,-0.091,-38.627)
N9: (58.914,-1.437,-40.084)
O5': (61.815,-5.061,-41.992)
O3': (60.680,-3.310,-44.231)
Image (generated by PyMOL):