ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QRU:B11:B42

Extra

PDB:
ATOM 1 O3' C A 10 28.932 22.863 24.714 1.00 6.58 O
ATOM 2 P A A 11 28.367 24.355 24.734 1.00 6.56 P
ATOM 3 OP1 A A 11 29.207 25.175 23.848 1.00 2.01 O
ATOM 4 OP2 A A 11 28.195 24.734 26.146 1.00 2.01 O
ATOM 5 O5' A A 11 26.925 24.217 24.098 1.00 6.50 O
ATOM 6 C5' A A 11 26.764 23.734 22.784 1.00 10.51 C
ATOM 7 C4' A A 11 25.293 23.644 22.465 1.00 15.97 C
ATOM 8 O4' A A 11 24.668 22.655 23.322 1.00 18.58 O
ATOM 9 C3' A A 11 24.472 24.898 22.702 1.00 16.21 C
ATOM 10 O3' A A 11 24.641 25.749 21.572 1.00 18.51 O
ATOM 11 C2' A A 11 23.062 24.316 22.822 1.00 19.41 C
ATOM 12 O2' A A 11 22.556 23.887 21.581 1.00 19.94 O
ATOM 13 C1' A A 11 23.328 23.031 23.600 1.00 20.38 C
ATOM 14 N9 A A 11 23.159 23.125 25.051 1.00 23.67 N
ATOM 15 C8 A A 11 24.120 23.341 26.000 1.00 26.85 C
ATOM 16 N7 A A 11 23.656 23.395 27.221 1.00 28.24 N
ATOM 17 C5 A A 11 22.294 23.204 27.064 1.00 26.81 C
ATOM 18 C6 A A 11 21.230 23.174 27.985 1.00 26.87 C
ATOM 19 N6 A A 11 21.377 23.344 29.309 1.00 27.36 N
ATOM 20 N1 A A 11 19.989 22.965 27.491 1.00 29.43 N
ATOM 21 C2 A A 11 19.842 22.789 26.179 1.00 30.03 C
ATOM 22 N3 A A 11 20.758 22.793 25.225 1.00 29.66 N
ATOM 23 C4 A A 11 21.979 23.018 25.739 1.00 26.19 C
ATOM 24 P A A 12 23.862 27.142 21.494 1.00 21.86 P
ATOM 25 OP1 A A 12 24.459 27.922 20.377 1.00 23.96 O
ATOM 26 OP2 A A 12 23.795 27.762 22.836 1.00 23.86 O
ATOM 27 O5' A A 12 22.397 26.710 21.074 1.00 25.27 O
TER

ATOM 1 O3' C B 41 14.495 15.073 33.883 1.00 76.43 O
ATOM 2 P A B 42 13.279 16.101 33.605 1.00 76.34 P
ATOM 3 OP1 A B 42 12.158 15.739 34.521 1.00 77.76 O
ATOM 4 OP2 A B 42 13.039 16.135 32.133 1.00 77.31 O
ATOM 5 O5' A B 42 13.868 17.513 34.059 1.00 74.43 O
ATOM 6 C5' A B 42 14.392 17.699 35.377 1.00 68.79 C
ATOM 7 C4' A B 42 14.673 19.164 35.625 1.00 63.00 C
ATOM 8 O4' A B 42 15.697 19.612 34.701 1.00 58.97 O
ATOM 9 C3' A B 42 13.503 20.106 35.379 1.00 62.16 C
ATOM 10 O3' A B 42 12.569 20.126 36.478 1.00 60.53 O
ATOM 11 C2' A B 42 14.161 21.436 35.001 1.00 55.53 C
ATOM 12 O2' A B 42 14.322 22.362 36.059 1.00 53.39 O
ATOM 13 C1' A B 42 15.518 20.985 34.435 1.00 54.61 C
ATOM 14 N9 A B 42 15.751 21.227 33.010 1.00 49.87 N
ATOM 15 C8 A B 42 14.898 21.082 31.947 1.00 49.91 C
ATOM 16 N7 A B 42 15.436 21.421 30.792 1.00 47.04 N
ATOM 17 C5 A B 42 16.730 21.802 31.124 1.00 48.29 C
ATOM 18 C6 A B 42 17.810 22.282 30.352 1.00 47.99 C
ATOM 19 N6 A B 42 17.752 22.486 29.039 1.00 48.41 N
ATOM 20 N1 A B 42 18.962 22.565 30.992 1.00 46.99 N
ATOM 21 C2 A B 42 19.013 22.397 32.316 1.00 49.79 C
ATOM 22 N3 A B 42 18.068 21.966 33.153 1.00 48.61 N
ATOM 23 C4 A B 42 16.937 21.683 32.481 1.00 48.45 C
ATOM 24 P U B 43 13.073 20.405 37.996 1.00 60.44 P
ATOM 25 OP1 U B 43 14.379 21.121 38.047 1.00 59.95 O
ATOM 26 OP2 U B 43 12.946 19.096 38.697 1.00 58.99 O
ATOM 27 O5' U B 43 11.964 21.401 38.580 1.00 64.63 O
TER

Atoms:
OP1: (29.207,25.175,23.848)
OP2: (28.195,24.734,26.146)
C3': (24.472,24.898,22.702)
C1': (23.328,23.031,23.600)
C5': (26.764,23.734,22.784)
O4': (24.668,22.655,23.322)
C8: (24.120,23.341,26.000)
O2': (22.556,23.887,21.581)
C6: (21.230,23.174,27.985)
C5: (22.294,23.204,27.064)
C4: (21.979,23.018,25.739)
P: (28.367,24.355,24.734)
C4': (25.293,23.644,22.465)
C2': (23.062,24.316,22.822)
C2: (19.842,22.789,26.179)
N1: (19.989,22.965,27.491)
N3: (20.758,22.793,25.225)
N6: (21.377,23.344,29.309)
N7: (23.656,23.395,27.221)
N9: (23.159,23.125,25.051)
O5': (26.925,24.217,24.098)
O3': (24.641,25.749,21.572)
OP1: (12.158,15.739,34.521)
OP2: (13.039,16.135,32.133)
C3': (13.503,20.106,35.379)
C1': (15.518,20.985,34.435)
C5': (14.392,17.699,35.377)
O4': (15.697,19.612,34.701)
C8: (14.898,21.082,31.947)
O2': (14.322,22.362,36.059)
C6: (17.810,22.282,30.352)
C5: (16.730,21.802,31.124)
C4: (16.937,21.683,32.481)
P: (13.279,16.101,33.605)
C4': (14.673,19.164,35.625)
C2': (14.161,21.436,35.001)
C2: (19.013,22.397,32.316)
N1: (18.962,22.565,30.992)
N3: (18.068,21.966,33.153)
N6: (17.752,22.486,29.039)
N7: (15.436,21.421,30.792)
N9: (15.751,21.227,33.010)
O5': (13.868,17.513,34.059)
O3': (12.569,20.126,36.478)
Image (generated by PyMOL):
PyMOL image
show in jmol