ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A449:A479

Extra

PDB:
ATOM 1 O3' G A 448 -62.909 18.859 -95.995 1.00 42.15 O
ATOM 2 P A A 449 -62.001 17.629 -96.451 1.00 56.07 P
ATOM 3 OP1 A A 449 -62.767 16.397 -96.155 1.00 56.07 O
ATOM 4 OP2 A A 449 -60.680 17.816 -95.815 1.00 56.07 O
ATOM 5 O5' A A 449 -61.902 17.834 -98.043 1.00 56.07 O
ATOM 6 C5' A A 449 -60.685 18.258 -98.670 1.00 56.07 C
ATOM 7 C4' A A 449 -60.740 18.165-100.188 1.00 56.07 C
ATOM 8 O4' A A 449 -60.861 16.773-100.599 1.00 56.07 O
ATOM 9 C3' A A 449 -61.897 18.888-100.849 1.00 56.07 C
ATOM 10 O3' A A 449 -61.485 19.321-102.134 1.00 56.07 O
ATOM 11 C2' A A 449 -62.928 17.778-101.002 1.00 56.07 C
ATOM 12 O2' A A 449 -63.922 18.016-101.978 1.00 56.07 O
ATOM 13 C1' A A 449 -62.033 16.606-101.376 1.00 56.07 C
ATOM 14 N9 A A 449 -62.612 15.292-101.068 1.00 56.53 N
ATOM 15 C8 A A 449 -62.862 14.833 -99.801 1.00 56.53 C
ATOM 16 N7 A A 449 -63.390 13.637 -99.769 1.00 56.53 N
ATOM 17 C5 A A 449 -63.504 13.272-101.098 1.00 56.53 C
ATOM 18 C6 A A 449 -64.003 12.097-101.683 1.00 56.53 C
ATOM 19 N6 A A 449 -64.456 11.098-100.921 1.00 56.53 N
ATOM 20 N1 A A 449 -64.005 11.988-103.037 1.00 56.53 N
ATOM 21 C2 A A 449 -63.527 13.037-103.723 1.00 56.53 C
ATOM 22 N3 A A 449 -63.028 14.202-103.275 1.00 56.53 N
ATOM 23 C4 A A 449 -63.033 14.273-101.925 1.00 56.53 C
ATOM 24 P A A 450 -60.829 20.766-102.327 1.00 35.48 P
ATOM 25 OP1 A A 450 -61.804 21.754-101.807 1.00 35.48 O
ATOM 26 OP2 A A 450 -60.405 20.859-103.747 1.00 35.48 O
ATOM 27 O5' A A 450 -59.548 20.704-101.389 1.00 35.48 O
TER

ATOM 1 O3' U B 478 -64.443 7.674-103.249 1.00 41.54 O
ATOM 2 P G B 479 -65.988 8.055-103.244 1.00 31.56 P
ATOM 3 OP1 G B 479 -66.672 7.093-102.337 1.00 31.56 O
ATOM 4 OP2 G B 479 -66.427 8.133-104.661 1.00 31.56 O
ATOM 5 O5' G B 479 -65.961 9.508-102.612 1.00 31.56 O
ATOM 6 C5' G B 479 -66.909 9.890-101.643 1.00 31.56 C
ATOM 7 C4' G B 479 -66.817 9.032-100.407 1.00 31.56 C
ATOM 8 O4' G B 479 -66.029 9.692 -99.405 1.00 31.56 O
ATOM 9 C3' G B 479 -68.150 8.716 -99.751 1.00 31.56 C
ATOM 10 O3' G B 479 -68.254 7.319 -99.443 1.00 31.56 O
ATOM 11 C2' G B 479 -68.221 9.635 -98.527 1.00 31.56 C
ATOM 12 O2' G B 479 -68.355 8.868 -97.344 1.00 31.56 O
ATOM 13 C1' G B 479 -66.859 10.336 -98.505 1.00 31.56 C
ATOM 14 N9 G B 479 -66.908 11.732 -98.928 1.00 31.37 N
ATOM 15 C8 G B 479 -67.549 12.276 -99.992 1.00 31.37 C
ATOM 16 N7 G B 479 -67.259 13.538-100.152 1.00 31.37 N
ATOM 17 C5 G B 479 -66.338 13.826 -99.163 1.00 31.37 C
ATOM 18 C6 G B 479 -65.665 15.043 -98.830 1.00 31.37 C
ATOM 19 O6 G B 479 -65.751 16.155 -99.374 1.00 31.37 O
ATOM 20 N1 G B 479 -64.813 14.899 -97.733 1.00 31.37 N
ATOM 21 C2 G B 479 -64.648 13.715 -97.054 1.00 31.37 C
ATOM 22 N2 G B 479 -63.796 13.755 -96.031 1.00 31.37 N
ATOM 23 N3 G B 479 -65.265 12.574 -97.359 1.00 31.37 N
ATOM 24 C4 G B 479 -66.094 12.704 -98.417 1.00 31.37 C
ATOM 25 P A B 480 -69.618 6.679 -98.857 1.00 36.01 P
ATOM 26 OP1 A B 480 -69.867 5.402 -99.592 1.00 36.01 O
ATOM 27 OP2 A B 480 -70.658 7.757 -98.903 1.00 36.01 O
ATOM 28 O5' A B 480 -69.232 6.354 -97.347 1.00 36.01 O
TER

Atoms:
OP1: (-62.767,16.397,-96.155)
OP2: (-60.680,17.816,-95.815)
C3': (-61.897,18.888,-100.849)
C1': (-62.033,16.606,-101.376)
C5': (-60.685,18.258,-98.670)
O4': (-60.861,16.773,-100.599)
C8: (-62.862,14.833,-99.801)
O2': (-63.922,18.016,-101.978)
C6: (-64.003,12.097,-101.683)
C5: (-63.504,13.272,-101.098)
C4: (-63.033,14.273,-101.925)
P: (-62.001,17.629,-96.451)
C4': (-60.740,18.165,-100.188)
C2': (-62.928,17.778,-101.002)
C2: (-63.527,13.037,-103.723)
N1: (-64.005,11.988,-103.037)
N3: (-63.028,14.202,-103.275)
N6: (-64.456,11.098,-100.921)
N7: (-63.390,13.637,-99.769)
N9: (-62.612,15.292,-101.068)
O5': (-61.902,17.834,-98.043)
O3': (-61.485,19.321,-102.134)
OP1: (-66.672,7.093,-102.337)
OP2: (-66.427,8.133,-104.661)
C3': (-68.150,8.716,-99.751)
C1': (-66.859,10.336,-98.505)
C5': (-66.909,9.890,-101.643)
O6: (-65.751,16.155,-99.374)
O4': (-66.029,9.692,-99.405)
C8: (-67.549,12.276,-99.992)
C2: (-64.648,13.715,-97.054)
C6: (-65.665,15.043,-98.830)
C5: (-66.338,13.826,-99.163)
C4: (-66.094,12.704,-98.417)
P: (-65.988,8.055,-103.244)
C4': (-66.817,9.032,-100.407)
C2': (-68.221,9.635,-98.527)
O2': (-68.355,8.868,-97.344)
N1: (-64.813,14.899,-97.733)
N2: (-63.796,13.755,-96.031)
N3: (-65.265,12.574,-97.359)
N7: (-67.259,13.538,-100.152)
N9: (-66.908,11.732,-98.928)
O5': (-65.961,9.508,-102.612)
O3': (-68.254,7.319,-99.443)
Image (generated by PyMOL):
PyMOL image
show in jmol