ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A962:A951

Extra

PDB:
ATOM 1 O3' G A 961 -130.891 23.578 -18.024 1.00 26.82 O
ATOM 2 P A A 962 -129.628 23.060 -17.196 1.00 16.41 P
ATOM 3 OP1 A A 962 -128.613 22.660 -18.188 1.00 16.41 O
ATOM 4 OP2 A A 962 -130.111 22.058 -16.229 1.00 16.41 O
ATOM 5 O5' A A 962 -129.149 24.359 -16.404 1.00 16.41 O
ATOM 6 C5' A A 962 -129.867 25.587 -16.506 1.00 16.41 C
ATOM 7 C4' A A 962 -130.083 26.245 -15.155 1.00 16.41 C
ATOM 8 O4' A A 962 -131.376 25.858 -14.613 1.00 16.41 O
ATOM 9 C3' A A 962 -129.093 25.881 -14.054 1.00 16.41 C
ATOM 10 O3' A A 962 -127.858 26.592 -14.144 1.00 16.41 O
ATOM 11 C2' A A 962 -129.893 26.189 -12.793 1.00 16.41 C
ATOM 12 O2' A A 962 -129.928 27.586 -12.535 1.00 16.41 O
ATOM 13 C1' A A 962 -131.293 25.743 -13.209 1.00 16.41 C
ATOM 14 N9 A A 962 -131.574 24.339 -12.818 1.00 16.55 N
ATOM 15 C8 A A 962 -131.751 23.215 -13.600 1.00 16.55 C
ATOM 16 N7 A A 962 -131.991 22.105 -12.926 1.00 16.55 N
ATOM 17 C5 A A 962 -131.979 22.521 -11.602 1.00 16.55 C
ATOM 18 C6 A A 962 -132.170 21.844 -10.364 1.00 16.55 C
ATOM 19 N6 A A 962 -132.430 20.535 -10.222 1.00 16.55 N
ATOM 20 N1 A A 962 -132.086 22.586 -9.219 1.00 16.55 N
ATOM 21 C2 A A 962 -131.825 23.900 -9.304 1.00 16.55 C
ATOM 22 N3 A A 962 -131.627 24.621 -10.406 1.00 16.55 N
ATOM 23 C4 A A 962 -131.722 23.885 -11.529 1.00 16.55 C
ATOM 24 P U A 963 -126.450 25.804 -14.106 1.00 35.05 P
ATOM 25 OP1 U A 963 -125.377 26.809 -14.329 1.00 35.05 O
ATOM 26 OP2 U A 963 -126.568 24.658 -15.046 1.00 35.05 O
ATOM 27 O5' U A 963 -126.380 25.258 -12.612 1.00 35.05 O
TER

ATOM 1 O3' U B 950 -132.630 18.207 -8.650 1.00 12.56 O
ATOM 2 P G B 951 -132.693 16.703 -9.212 1.00 29.05 P
ATOM 3 OP1 G B 951 -132.492 16.765 -10.673 1.00 29.05 O
ATOM 4 OP2 G B 951 -133.932 16.108 -8.697 1.00 29.05 O
ATOM 5 O5' G B 951 -131.436 16.014 -8.528 1.00 29.05 O
ATOM 6 C5' G B 951 -130.155 16.636 -8.558 1.00 29.05 C
ATOM 7 C4' G B 951 -129.173 15.925 -7.654 1.00 29.05 C
ATOM 8 O4' G B 951 -129.495 16.195 -6.255 1.00 29.05 O
ATOM 9 C3' G B 951 -129.177 14.404 -7.740 1.00 29.05 C
ATOM 10 O3' G B 951 -128.418 13.899 -8.811 1.00 29.05 O
ATOM 11 C2' G B 951 -128.656 14.001 -6.375 1.00 29.05 C
ATOM 12 O2' G B 951 -127.260 14.269 -6.264 1.00 29.05 O
ATOM 13 C1' G B 951 -129.398 14.996 -5.506 1.00 29.05 C
ATOM 14 N9 G B 951 -130.772 14.545 -5.183 1.00 29.40 N
ATOM 15 C8 G B 951 -131.892 14.998 -5.827 1.00 29.40 C
ATOM 16 N7 G B 951 -133.003 14.515 -5.356 1.00 29.40 N
ATOM 17 C5 G B 951 -132.605 13.683 -4.325 1.00 29.40 C
ATOM 18 C6 G B 951 -133.392 12.886 -3.453 1.00 29.40 C
ATOM 19 O6 G B 951 -134.631 12.752 -3.415 1.00 29.40 O
ATOM 20 N1 G B 951 -132.590 12.199 -2.557 1.00 29.40 N
ATOM 21 C2 G B 951 -131.234 12.275 -2.509 1.00 29.40 C
ATOM 22 N2 G B 951 -130.656 11.540 -1.559 1.00 29.40 N
ATOM 23 N3 G B 951 -130.495 13.006 -3.312 1.00 29.40 N
ATOM 24 C4 G B 951 -131.234 13.691 -4.198 1.00 29.40 C
ATOM 25 P G B 952 -128.997 12.683 -9.664 1.00 29.51 P
ATOM 26 OP1 G B 952 -127.912 12.212 -10.544 1.00 29.51 O
ATOM 27 OP2 G B 952 -130.251 13.148 -10.277 1.00 29.51 O
ATOM 28 O5' G B 952 -129.311 11.588 -8.548 1.00 29.51 O
TER

Atoms:
OP1: (-128.613,22.660,-18.188)
OP2: (-130.111,22.058,-16.229)
C3': (-129.093,25.881,-14.054)
C1': (-131.293,25.743,-13.209)
C5': (-129.867,25.587,-16.506)
O4': (-131.376,25.858,-14.613)
C8: (-131.751,23.215,-13.600)
O2': (-129.928,27.586,-12.535)
C6: (-132.170,21.844,-10.364)
C5: (-131.979,22.521,-11.602)
C4: (-131.722,23.885,-11.529)
P: (-129.628,23.060,-17.196)
C4': (-130.083,26.245,-15.155)
C2': (-129.893,26.189,-12.793)
C2: (-131.825,23.900,-9.304)
N1: (-132.086,22.586,-9.219)
N3: (-131.627,24.621,-10.406)
N6: (-132.430,20.535,-10.222)
N7: (-131.991,22.105,-12.926)
N9: (-131.574,24.339,-12.818)
O5': (-129.149,24.359,-16.404)
O3': (-127.858,26.592,-14.144)
OP1: (-132.492,16.765,-10.673)
OP2: (-133.932,16.108,-8.697)
C3': (-129.177,14.404,-7.740)
C1': (-129.398,14.996,-5.506)
C5': (-130.155,16.636,-8.558)
O6: (-134.631,12.752,-3.415)
O4': (-129.495,16.195,-6.255)
C8: (-131.892,14.998,-5.827)
C2: (-131.234,12.275,-2.509)
C6: (-133.392,12.886,-3.453)
C5: (-132.605,13.683,-4.325)
C4: (-131.234,13.691,-4.198)
P: (-132.693,16.703,-9.212)
C4': (-129.173,15.925,-7.654)
C2': (-128.656,14.001,-6.375)
O2': (-127.260,14.269,-6.264)
N1: (-132.590,12.199,-2.557)
N2: (-130.656,11.540,-1.559)
N3: (-130.495,13.006,-3.312)
N7: (-133.003,14.515,-5.356)
N9: (-130.772,14.545,-5.183)
O5': (-131.436,16.014,-8.528)
O3': (-128.418,13.899,-8.811)
Image (generated by PyMOL):
PyMOL image
show in jmol