Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21007:2924
Extra
PDB:
ATOM 1 O3' U A1006 -45.917 7.277 95.426 1.00 55.06 O
ATOM 2 P A A1007 -47.445 6.968 95.068 1.00 64.80 P
ATOM 3 OP1 A A1007 -47.597 7.010 93.589 1.00 64.38 O
ATOM 4 OP2 A A1007 -48.211 7.873 95.875 1.00 64.86 O
ATOM 5 O5' A A1007 -47.680 5.489 95.618 1.00 65.67 O
ATOM 6 C5' A A1007 -48.703 5.245 96.586 1.00 66.35 C
ATOM 7 C4' A A1007 -49.047 3.777 96.703 1.00 67.16 C
ATOM 8 O4' A A1007 -48.136 3.142 97.635 1.00 67.57 O
ATOM 9 C3' A A1007 -50.444 3.469 97.234 1.00 67.85 C
ATOM 10 O3' A A1007 -51.412 3.364 96.198 1.00 67.82 O
ATOM 11 C2' A A1007 -50.248 2.173 98.012 1.00 68.71 C
ATOM 12 O2' A A1007 -50.290 1.036 97.144 1.00 68.99 O
ATOM 13 C1' A A1007 -48.828 2.328 98.529 1.00 68.47 C
ATOM 14 N9 A A1007 -48.773 2.963 99.857 1.00 68.65 N
ATOM 15 C8 A A1007 -48.275 4.218 100.135 1.00 68.04 C
ATOM 16 N7 A A1007 -48.291 4.537 101.400 1.00 68.42 N
ATOM 17 C5 A A1007 -48.835 3.413 102.004 1.00 69.35 C
ATOM 18 C6 A A1007 -49.141 3.119 103.343 1.00 70.18 C
ATOM 19 N6 A A1007 -48.912 3.984 104.335 1.00 70.17 N
ATOM 20 N1 A A1007 -49.688 1.908 103.636 1.00 71.06 N
ATOM 21 C2 A A1007 -49.913 1.041 102.635 1.00 71.11 C
ATOM 22 N3 A A1007 -49.688 1.213 101.332 1.00 70.38 N
ATOM 23 C4 A A1007 -49.137 2.428 101.076 1.00 69.51 C
ATOM 24 P A A1008 -52.382 4.599 95.851 1.00 53.69 P
ATOM 25 OP1 A A1008 -52.049 5.077 94.509 1.00 52.96 O
ATOM 26 OP2 A A1008 -52.326 5.528 96.967 1.00 53.63 O
ATOM 27 O5' A A1008 -53.795 3.941 95.825 1.00 54.43 O
TER
ATOM 1 O3' A B 923 -50.162 2.674 107.131 1.00 72.85 O
ATOM 2 P G B 924 -50.612 1.185 107.590 1.00 75.13 P
ATOM 3 OP1 G B 924 -49.564 0.238 107.138 1.00 75.13 O
ATOM 4 OP2 G B 924 -52.024 0.975 107.093 1.00 75.36 O
ATOM 5 O5' G B 924 -50.597 1.258 109.174 1.00 75.98 O
ATOM 6 C5' G B 924 -49.501 0.764 109.917 1.00 76.40 C
ATOM 7 C4' G B 924 -49.404 1.489 111.214 1.00 76.77 C
ATOM 8 O4' G B 924 -50.465 2.473 111.269 1.00 76.55 O
ATOM 9 C3' G B 924 -49.623 0.658 112.449 1.00 78.04 C
ATOM 10 O3' G B 924 -48.464 -0.023 112.861 1.00 78.41 O
ATOM 11 C2' G B 924 -50.095 1.690 113.451 1.00 78.25 C
ATOM 12 O2' G B 924 -49.000 2.471 113.894 1.00 77.86 O
ATOM 13 C1' G B 924 -50.977 2.563 112.574 1.00 77.46 C
ATOM 14 N9 G B 924 -52.408 2.126 112.569 1.00 78.07 N
ATOM 15 C8 G B 924 -53.122 1.558 111.538 1.00 77.93 C
ATOM 16 N7 G B 924 -54.378 1.305 111.828 1.00 78.63 N
ATOM 17 C5 G B 924 -54.529 1.732 113.131 1.00 79.28 C
ATOM 18 C6 G B 924 -55.655 1.723 114.008 1.00 80.23 C
ATOM 19 O6 G B 924 -56.797 1.327 113.824 1.00 80.71 O
ATOM 20 N1 G B 924 -55.391 2.260 115.251 1.00 80.70 N
ATOM 21 C2 G B 924 -54.176 2.746 115.617 1.00 80.31 C
ATOM 22 N2 G B 924 -54.098 3.230 116.863 1.00 80.91 N
ATOM 23 N3 G B 924 -53.115 2.757 114.825 1.00 79.44 N
ATOM 24 C4 G B 924 -53.340 2.245 113.595 1.00 78.95 C
ATOM 25 P C B 925 -48.601 -1.384 113.705 1.00 79.97 P
ATOM 26 OP1 C B 925 -47.229 -1.829 114.052 1.00 80.17 O
ATOM 27 OP2 C B 925 -49.472 -2.292 112.911 1.00 80.18 O
ATOM 28 O5' C B 925 -49.361 -0.911 115.021 1.00 80.75 O
TER
ATOM 2 P A A1007 -47.445 6.968 95.068 1.00 64.80 P
ATOM 3 OP1 A A1007 -47.597 7.010 93.589 1.00 64.38 O
ATOM 4 OP2 A A1007 -48.211 7.873 95.875 1.00 64.86 O
ATOM 5 O5' A A1007 -47.680 5.489 95.618 1.00 65.67 O
ATOM 6 C5' A A1007 -48.703 5.245 96.586 1.00 66.35 C
ATOM 7 C4' A A1007 -49.047 3.777 96.703 1.00 67.16 C
ATOM 8 O4' A A1007 -48.136 3.142 97.635 1.00 67.57 O
ATOM 9 C3' A A1007 -50.444 3.469 97.234 1.00 67.85 C
ATOM 10 O3' A A1007 -51.412 3.364 96.198 1.00 67.82 O
ATOM 11 C2' A A1007 -50.248 2.173 98.012 1.00 68.71 C
ATOM 12 O2' A A1007 -50.290 1.036 97.144 1.00 68.99 O
ATOM 13 C1' A A1007 -48.828 2.328 98.529 1.00 68.47 C
ATOM 14 N9 A A1007 -48.773 2.963 99.857 1.00 68.65 N
ATOM 15 C8 A A1007 -48.275 4.218 100.135 1.00 68.04 C
ATOM 16 N7 A A1007 -48.291 4.537 101.400 1.00 68.42 N
ATOM 17 C5 A A1007 -48.835 3.413 102.004 1.00 69.35 C
ATOM 18 C6 A A1007 -49.141 3.119 103.343 1.00 70.18 C
ATOM 19 N6 A A1007 -48.912 3.984 104.335 1.00 70.17 N
ATOM 20 N1 A A1007 -49.688 1.908 103.636 1.00 71.06 N
ATOM 21 C2 A A1007 -49.913 1.041 102.635 1.00 71.11 C
ATOM 22 N3 A A1007 -49.688 1.213 101.332 1.00 70.38 N
ATOM 23 C4 A A1007 -49.137 2.428 101.076 1.00 69.51 C
ATOM 24 P A A1008 -52.382 4.599 95.851 1.00 53.69 P
ATOM 25 OP1 A A1008 -52.049 5.077 94.509 1.00 52.96 O
ATOM 26 OP2 A A1008 -52.326 5.528 96.967 1.00 53.63 O
ATOM 27 O5' A A1008 -53.795 3.941 95.825 1.00 54.43 O
TER
ATOM 1 O3' A B 923 -50.162 2.674 107.131 1.00 72.85 O
ATOM 2 P G B 924 -50.612 1.185 107.590 1.00 75.13 P
ATOM 3 OP1 G B 924 -49.564 0.238 107.138 1.00 75.13 O
ATOM 4 OP2 G B 924 -52.024 0.975 107.093 1.00 75.36 O
ATOM 5 O5' G B 924 -50.597 1.258 109.174 1.00 75.98 O
ATOM 6 C5' G B 924 -49.501 0.764 109.917 1.00 76.40 C
ATOM 7 C4' G B 924 -49.404 1.489 111.214 1.00 76.77 C
ATOM 8 O4' G B 924 -50.465 2.473 111.269 1.00 76.55 O
ATOM 9 C3' G B 924 -49.623 0.658 112.449 1.00 78.04 C
ATOM 10 O3' G B 924 -48.464 -0.023 112.861 1.00 78.41 O
ATOM 11 C2' G B 924 -50.095 1.690 113.451 1.00 78.25 C
ATOM 12 O2' G B 924 -49.000 2.471 113.894 1.00 77.86 O
ATOM 13 C1' G B 924 -50.977 2.563 112.574 1.00 77.46 C
ATOM 14 N9 G B 924 -52.408 2.126 112.569 1.00 78.07 N
ATOM 15 C8 G B 924 -53.122 1.558 111.538 1.00 77.93 C
ATOM 16 N7 G B 924 -54.378 1.305 111.828 1.00 78.63 N
ATOM 17 C5 G B 924 -54.529 1.732 113.131 1.00 79.28 C
ATOM 18 C6 G B 924 -55.655 1.723 114.008 1.00 80.23 C
ATOM 19 O6 G B 924 -56.797 1.327 113.824 1.00 80.71 O
ATOM 20 N1 G B 924 -55.391 2.260 115.251 1.00 80.70 N
ATOM 21 C2 G B 924 -54.176 2.746 115.617 1.00 80.31 C
ATOM 22 N2 G B 924 -54.098 3.230 116.863 1.00 80.91 N
ATOM 23 N3 G B 924 -53.115 2.757 114.825 1.00 79.44 N
ATOM 24 C4 G B 924 -53.340 2.245 113.595 1.00 78.95 C
ATOM 25 P C B 925 -48.601 -1.384 113.705 1.00 79.97 P
ATOM 26 OP1 C B 925 -47.229 -1.829 114.052 1.00 80.17 O
ATOM 27 OP2 C B 925 -49.472 -2.292 112.911 1.00 80.18 O
ATOM 28 O5' C B 925 -49.361 -0.911 115.021 1.00 80.75 O
TER
Atoms:
OP1: (-47.597,7.010,93.589)
OP2: (-48.211,7.873,95.875)
C3': (-50.444,3.469,97.234)
C1': (-48.828,2.328,98.529)
C5': (-48.703,5.245,96.586)
O4': (-48.136,3.142,97.635)
C8: (-48.275,4.218,100.135)
O2': (-50.290,1.036,97.144)
C6: (-49.141,3.119,103.343)
C5: (-48.835,3.413,102.004)
C4: (-49.137,2.428,101.076)
P: (-47.445,6.968,95.068)
C4': (-49.047,3.777,96.703)
C2': (-50.248,2.173,98.012)
C2: (-49.913,1.041,102.635)
N1: (-49.688,1.908,103.636)
N3: (-49.688,1.213,101.332)
N6: (-48.912,3.984,104.335)
N7: (-48.291,4.537,101.400)
N9: (-48.773,2.963,99.857)
O5': (-47.680,5.489,95.618)
O3': (-51.412,3.364,96.198)
OP2: (-48.211,7.873,95.875)
C3': (-50.444,3.469,97.234)
C1': (-48.828,2.328,98.529)
C5': (-48.703,5.245,96.586)
O4': (-48.136,3.142,97.635)
C8: (-48.275,4.218,100.135)
O2': (-50.290,1.036,97.144)
C6: (-49.141,3.119,103.343)
C5: (-48.835,3.413,102.004)
C4: (-49.137,2.428,101.076)
P: (-47.445,6.968,95.068)
C4': (-49.047,3.777,96.703)
C2': (-50.248,2.173,98.012)
C2: (-49.913,1.041,102.635)
N1: (-49.688,1.908,103.636)
N3: (-49.688,1.213,101.332)
N6: (-48.912,3.984,104.335)
N7: (-48.291,4.537,101.400)
N9: (-48.773,2.963,99.857)
O5': (-47.680,5.489,95.618)
O3': (-51.412,3.364,96.198)
OP1: (-49.564,0.238,107.138)
OP2: (-52.024,0.975,107.093)
C3': (-49.623,0.658,112.449)
C1': (-50.977,2.563,112.574)
C5': (-49.501,0.764,109.917)
O6: (-56.797,1.327,113.824)
O4': (-50.465,2.473,111.269)
C8: (-53.122,1.558,111.538)
C2: (-54.176,2.746,115.617)
C6: (-55.655,1.723,114.008)
C5: (-54.529,1.732,113.131)
C4: (-53.340,2.245,113.595)
P: (-50.612,1.185,107.590)
C4': (-49.404,1.489,111.214)
C2': (-50.095,1.690,113.451)
O2': (-49.000,2.471,113.894)
N1: (-55.391,2.260,115.251)
N2: (-54.098,3.230,116.863)
N3: (-53.115,2.757,114.825)
N7: (-54.378,1.305,111.828)
N9: (-52.408,2.126,112.569)
O5': (-50.597,1.258,109.174)
O3': (-48.464,-0.023,112.861)
OP2: (-52.024,0.975,107.093)
C3': (-49.623,0.658,112.449)
C1': (-50.977,2.563,112.574)
C5': (-49.501,0.764,109.917)
O6: (-56.797,1.327,113.824)
O4': (-50.465,2.473,111.269)
C8: (-53.122,1.558,111.538)
C2: (-54.176,2.746,115.617)
C6: (-55.655,1.723,114.008)
C5: (-54.529,1.732,113.131)
C4: (-53.340,2.245,113.595)
P: (-50.612,1.185,107.590)
C4': (-49.404,1.489,111.214)
C2': (-50.095,1.690,113.451)
O2': (-49.000,2.471,113.894)
N1: (-55.391,2.260,115.251)
N2: (-54.098,3.230,116.863)
N3: (-53.115,2.757,114.825)
N7: (-54.378,1.305,111.828)
N9: (-52.408,2.126,112.569)
O5': (-50.597,1.258,109.174)
O3': (-48.464,-0.023,112.861)
Image (generated by PyMOL):