Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2139:2280
Extra
PDB:
ATOM 1 O3' C A 138 -46.339 119.520 62.856 1.00110.51 O
ATOM 2 P A A 139 -47.336 119.202 61.610 1.00109.89 P
ATOM 3 OP1 A A 139 -47.954 120.483 61.236 1.00111.57 O
ATOM 4 OP2 A A 139 -48.222 118.095 62.030 1.00109.02 O
ATOM 5 O5' A A 139 -46.400 118.720 60.427 1.00109.40 O
ATOM 6 C5' A A 139 -46.972 118.057 59.302 1.00109.36 C
ATOM 7 C4' A A 139 -46.286 118.418 58.010 1.00109.90 C
ATOM 8 O4' A A 139 -47.239 119.048 57.106 1.00111.26 O
ATOM 9 C3' A A 139 -45.116 119.403 58.124 1.00110.37 C
ATOM 10 O3' A A 139 -44.196 119.129 57.065 1.00110.12 O
ATOM 11 C2' A A 139 -45.796 120.711 57.808 1.00112.08 C
ATOM 12 O2' A A 139 -44.915 121.738 57.433 1.00112.92 O
ATOM 13 C1' A A 139 -46.650 120.238 56.645 1.00112.39 C
ATOM 14 N9 A A 139 -47.678 121.170 56.164 1.00113.98 N
ATOM 15 C8 A A 139 -47.503 121.802 54.955 1.00115.04 C
ATOM 16 N7 A A 139 -48.460 122.597 54.589 1.00116.45 N
ATOM 17 C5 A A 139 -49.362 122.490 55.640 1.00116.31 C
ATOM 18 C6 A A 139 -50.613 123.126 55.831 1.00117.49 C
ATOM 19 N6 A A 139 -51.132 123.996 54.944 1.00119.03 N
ATOM 20 N1 A A 139 -51.289 122.832 56.968 1.00117.05 N
ATOM 21 C2 A A 139 -50.715 121.960 57.822 1.00115.53 C
ATOM 22 N3 A A 139 -49.546 121.297 57.758 1.00114.32 N
ATOM 23 C4 A A 139 -48.899 121.612 56.625 1.00114.79 C
ATOM 24 P U A 140 -42.648 118.821 57.368 1.00104.17 P
ATOM 25 OP1 U A 140 -42.291 119.553 58.615 1.00104.33 O
ATOM 26 OP2 U A 140 -41.888 119.121 56.119 1.00104.67 O
ATOM 27 O5' U A 140 -42.646 117.257 57.635 1.00102.53 O
TER
ATOM 1 O3' U B 279 -53.185 125.702 52.967 1.00207.23 O
ATOM 2 P G B 280 -54.054 125.489 54.332 1.00177.06 P
ATOM 3 OP1 G B 280 -53.231 124.639 55.226 1.00175.33 O
ATOM 4 OP2 G B 280 -55.403 125.002 53.949 1.00177.41 O
ATOM 5 O5' G B 280 -54.159 126.960 54.954 1.00178.46 O
ATOM 6 C5' G B 280 -53.341 127.350 56.059 1.00178.01 C
ATOM 7 C4' G B 280 -54.148 128.001 57.163 1.00178.70 C
ATOM 8 O4' G B 280 -55.229 128.787 56.591 1.00180.39 O
ATOM 9 C3' G B 280 -54.833 127.053 58.140 1.00177.63 C
ATOM 10 O3' G B 280 -53.958 126.620 59.180 1.00176.31 O
ATOM 11 C2' G B 280 -56.020 127.874 58.646 1.00178.99 C
ATOM 12 O2' G B 280 -55.618 128.729 59.705 1.00179.34 O
ATOM 13 C1' G B 280 -56.364 128.742 57.427 1.00180.62 C
ATOM 14 N9 G B 280 -57.510 128.221 56.639 1.00180.99 N
ATOM 15 C8 G B 280 -57.403 127.695 55.369 1.00180.87 C
ATOM 16 N7 G B 280 -58.536 127.325 54.848 1.00181.33 N
ATOM 17 C5 G B 280 -59.474 127.629 55.826 1.00181.80 C
ATOM 18 C6 G B 280 -60.888 127.447 55.823 1.00182.45 C
ATOM 19 O6 G B 280 -61.596 126.967 54.930 1.00182.74 O
ATOM 20 N1 G B 280 -61.484 127.887 57.002 1.00182.82 N
ATOM 21 C2 G B 280 -60.811 128.440 58.065 1.00182.60 C
ATOM 22 N2 G B 280 -61.574 128.802 59.116 1.00183.07 N
ATOM 23 N3 G B 280 -59.486 128.616 58.079 1.00182.00 N
ATOM 24 C4 G B 280 -58.869 128.194 56.939 1.00181.62 C
ATOM 25 P C B 281 -53.719 125.046 59.468 1.00136.70 P
ATOM 26 OP1 C B 281 -52.329 124.894 59.987 1.00135.65 O
ATOM 27 OP2 C B 281 -54.104 124.305 58.236 1.00136.55 O
ATOM 28 O5' C B 281 -54.767 124.744 60.628 1.00136.50 O
TER
ATOM 2 P A A 139 -47.336 119.202 61.610 1.00109.89 P
ATOM 3 OP1 A A 139 -47.954 120.483 61.236 1.00111.57 O
ATOM 4 OP2 A A 139 -48.222 118.095 62.030 1.00109.02 O
ATOM 5 O5' A A 139 -46.400 118.720 60.427 1.00109.40 O
ATOM 6 C5' A A 139 -46.972 118.057 59.302 1.00109.36 C
ATOM 7 C4' A A 139 -46.286 118.418 58.010 1.00109.90 C
ATOM 8 O4' A A 139 -47.239 119.048 57.106 1.00111.26 O
ATOM 9 C3' A A 139 -45.116 119.403 58.124 1.00110.37 C
ATOM 10 O3' A A 139 -44.196 119.129 57.065 1.00110.12 O
ATOM 11 C2' A A 139 -45.796 120.711 57.808 1.00112.08 C
ATOM 12 O2' A A 139 -44.915 121.738 57.433 1.00112.92 O
ATOM 13 C1' A A 139 -46.650 120.238 56.645 1.00112.39 C
ATOM 14 N9 A A 139 -47.678 121.170 56.164 1.00113.98 N
ATOM 15 C8 A A 139 -47.503 121.802 54.955 1.00115.04 C
ATOM 16 N7 A A 139 -48.460 122.597 54.589 1.00116.45 N
ATOM 17 C5 A A 139 -49.362 122.490 55.640 1.00116.31 C
ATOM 18 C6 A A 139 -50.613 123.126 55.831 1.00117.49 C
ATOM 19 N6 A A 139 -51.132 123.996 54.944 1.00119.03 N
ATOM 20 N1 A A 139 -51.289 122.832 56.968 1.00117.05 N
ATOM 21 C2 A A 139 -50.715 121.960 57.822 1.00115.53 C
ATOM 22 N3 A A 139 -49.546 121.297 57.758 1.00114.32 N
ATOM 23 C4 A A 139 -48.899 121.612 56.625 1.00114.79 C
ATOM 24 P U A 140 -42.648 118.821 57.368 1.00104.17 P
ATOM 25 OP1 U A 140 -42.291 119.553 58.615 1.00104.33 O
ATOM 26 OP2 U A 140 -41.888 119.121 56.119 1.00104.67 O
ATOM 27 O5' U A 140 -42.646 117.257 57.635 1.00102.53 O
TER
ATOM 1 O3' U B 279 -53.185 125.702 52.967 1.00207.23 O
ATOM 2 P G B 280 -54.054 125.489 54.332 1.00177.06 P
ATOM 3 OP1 G B 280 -53.231 124.639 55.226 1.00175.33 O
ATOM 4 OP2 G B 280 -55.403 125.002 53.949 1.00177.41 O
ATOM 5 O5' G B 280 -54.159 126.960 54.954 1.00178.46 O
ATOM 6 C5' G B 280 -53.341 127.350 56.059 1.00178.01 C
ATOM 7 C4' G B 280 -54.148 128.001 57.163 1.00178.70 C
ATOM 8 O4' G B 280 -55.229 128.787 56.591 1.00180.39 O
ATOM 9 C3' G B 280 -54.833 127.053 58.140 1.00177.63 C
ATOM 10 O3' G B 280 -53.958 126.620 59.180 1.00176.31 O
ATOM 11 C2' G B 280 -56.020 127.874 58.646 1.00178.99 C
ATOM 12 O2' G B 280 -55.618 128.729 59.705 1.00179.34 O
ATOM 13 C1' G B 280 -56.364 128.742 57.427 1.00180.62 C
ATOM 14 N9 G B 280 -57.510 128.221 56.639 1.00180.99 N
ATOM 15 C8 G B 280 -57.403 127.695 55.369 1.00180.87 C
ATOM 16 N7 G B 280 -58.536 127.325 54.848 1.00181.33 N
ATOM 17 C5 G B 280 -59.474 127.629 55.826 1.00181.80 C
ATOM 18 C6 G B 280 -60.888 127.447 55.823 1.00182.45 C
ATOM 19 O6 G B 280 -61.596 126.967 54.930 1.00182.74 O
ATOM 20 N1 G B 280 -61.484 127.887 57.002 1.00182.82 N
ATOM 21 C2 G B 280 -60.811 128.440 58.065 1.00182.60 C
ATOM 22 N2 G B 280 -61.574 128.802 59.116 1.00183.07 N
ATOM 23 N3 G B 280 -59.486 128.616 58.079 1.00182.00 N
ATOM 24 C4 G B 280 -58.869 128.194 56.939 1.00181.62 C
ATOM 25 P C B 281 -53.719 125.046 59.468 1.00136.70 P
ATOM 26 OP1 C B 281 -52.329 124.894 59.987 1.00135.65 O
ATOM 27 OP2 C B 281 -54.104 124.305 58.236 1.00136.55 O
ATOM 28 O5' C B 281 -54.767 124.744 60.628 1.00136.50 O
TER
Atoms:
OP1: (-47.954,120.483,61.236)
OP2: (-48.222,118.095,62.030)
C3': (-45.116,119.403,58.124)
C1': (-46.650,120.238,56.645)
C5': (-46.972,118.057,59.302)
O4': (-47.239,119.048,57.106)
C8: (-47.503,121.802,54.955)
O2': (-44.915,121.738,57.433)
C6: (-50.613,123.126,55.831)
C5: (-49.362,122.490,55.640)
C4: (-48.899,121.612,56.625)
P: (-47.336,119.202,61.610)
C4': (-46.286,118.418,58.010)
C2': (-45.796,120.711,57.808)
C2: (-50.715,121.960,57.822)
N1: (-51.289,122.832,56.968)
N3: (-49.546,121.297,57.758)
N6: (-51.132,123.996,54.944)
N7: (-48.460,122.597,54.589)
N9: (-47.678,121.170,56.164)
O5': (-46.400,118.720,60.427)
O3': (-44.196,119.129,57.065)
OP2: (-48.222,118.095,62.030)
C3': (-45.116,119.403,58.124)
C1': (-46.650,120.238,56.645)
C5': (-46.972,118.057,59.302)
O4': (-47.239,119.048,57.106)
C8: (-47.503,121.802,54.955)
O2': (-44.915,121.738,57.433)
C6: (-50.613,123.126,55.831)
C5: (-49.362,122.490,55.640)
C4: (-48.899,121.612,56.625)
P: (-47.336,119.202,61.610)
C4': (-46.286,118.418,58.010)
C2': (-45.796,120.711,57.808)
C2: (-50.715,121.960,57.822)
N1: (-51.289,122.832,56.968)
N3: (-49.546,121.297,57.758)
N6: (-51.132,123.996,54.944)
N7: (-48.460,122.597,54.589)
N9: (-47.678,121.170,56.164)
O5': (-46.400,118.720,60.427)
O3': (-44.196,119.129,57.065)
OP1: (-53.231,124.639,55.226)
OP2: (-55.403,125.002,53.949)
C3': (-54.833,127.053,58.140)
C1': (-56.364,128.742,57.427)
C5': (-53.341,127.350,56.059)
O6: (-61.596,126.967,54.930)
O4': (-55.229,128.787,56.591)
C8: (-57.403,127.695,55.369)
C2: (-60.811,128.440,58.065)
C6: (-60.888,127.447,55.823)
C5: (-59.474,127.629,55.826)
C4: (-58.869,128.194,56.939)
P: (-54.054,125.489,54.332)
C4': (-54.148,128.001,57.163)
C2': (-56.020,127.874,58.646)
O2': (-55.618,128.729,59.705)
N1: (-61.484,127.887,57.002)
N2: (-61.574,128.802,59.116)
N3: (-59.486,128.616,58.079)
N7: (-58.536,127.325,54.848)
N9: (-57.510,128.221,56.639)
O5': (-54.159,126.960,54.954)
O3': (-53.958,126.620,59.180)
OP2: (-55.403,125.002,53.949)
C3': (-54.833,127.053,58.140)
C1': (-56.364,128.742,57.427)
C5': (-53.341,127.350,56.059)
O6: (-61.596,126.967,54.930)
O4': (-55.229,128.787,56.591)
C8: (-57.403,127.695,55.369)
C2: (-60.811,128.440,58.065)
C6: (-60.888,127.447,55.823)
C5: (-59.474,127.629,55.826)
C4: (-58.869,128.194,56.939)
P: (-54.054,125.489,54.332)
C4': (-54.148,128.001,57.163)
C2': (-56.020,127.874,58.646)
O2': (-55.618,128.729,59.705)
N1: (-61.484,127.887,57.002)
N2: (-61.574,128.802,59.116)
N3: (-59.486,128.616,58.079)
N7: (-58.536,127.325,54.848)
N9: (-57.510,128.221,56.639)
O5': (-54.159,126.960,54.954)
O3': (-53.958,126.620,59.180)
Image (generated by PyMOL):