ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11830:12198

Extra

PDB:
ATOM 1 O3' U A1829 34.163 50.457 65.886 1.00 56.52 O
ATOM 2 P A A1830 33.744 50.698 64.381 1.00 44.19 P
ATOM 3 OP1 A A1830 34.822 51.498 63.740 1.00 44.42 O
ATOM 4 OP2 A A1830 32.355 51.240 64.401 1.00 44.48 O
ATOM 5 O5' A A1830 33.701 49.240 63.797 1.00 43.65 O
ATOM 6 C5' A A1830 34.718 48.309 64.032 1.00 43.25 C
ATOM 7 C4' A A1830 34.841 47.422 62.841 1.00 42.92 C
ATOM 8 O4' A A1830 36.197 46.959 62.713 1.00 42.69 O
ATOM 9 C3' A A1830 34.001 46.152 62.836 1.00 42.53 C
ATOM 10 O3' A A1830 32.650 46.385 62.459 1.00 42.70 O
ATOM 11 C2' A A1830 34.752 45.314 61.824 1.00 42.20 C
ATOM 12 O2' A A1830 34.471 45.799 60.515 1.00 42.40 O
ATOM 13 C1' A A1830 36.203 45.671 62.153 1.00 42.24 C
ATOM 14 N9 A A1830 36.804 44.767 63.133 1.00 41.90 N
ATOM 15 C8 A A1830 37.167 45.087 64.404 1.00 42.00 C
ATOM 16 N7 A A1830 37.703 44.102 65.037 1.00 41.65 N
ATOM 17 C5 A A1830 37.721 43.088 64.091 1.00 41.31 C
ATOM 18 C6 A A1830 38.171 41.757 64.091 1.00 40.86 C
ATOM 19 N6 A A1830 38.742 41.145 65.131 1.00 40.65 N
ATOM 20 N1 A A1830 38.009 41.033 62.977 1.00 40.64 N
ATOM 21 C2 A A1830 37.460 41.587 61.921 1.00 40.84 C
ATOM 22 N3 A A1830 37.013 42.825 61.798 1.00 41.26 N
ATOM 23 C4 A A1830 37.178 43.509 62.920 1.00 41.47 C
ATOM 24 P A A1831 31.429 45.484 63.060 1.00 45.56 P
ATOM 25 OP1 A A1831 30.166 46.043 62.489 1.00 45.85 O
ATOM 26 OP2 A A1831 31.579 45.446 64.557 1.00 45.54 O
ATOM 27 O5' A A1831 31.690 44.018 62.445 1.00 45.05 O
TER

ATOM 1 O3' A B2197 41.271 38.831 63.925 1.00 40.84 O
ATOM 2 P G B2198 40.223 37.788 64.537 1.00 43.60 P
ATOM 3 OP1 G B2198 39.616 38.470 65.708 1.00 43.83 O
ATOM 4 OP2 G B2198 40.905 36.514 64.755 1.00 43.21 O
ATOM 5 O5' G B2198 39.150 37.633 63.356 1.00 43.58 O
ATOM 6 C5' G B2198 38.500 36.397 63.065 1.00 43.25 C
ATOM 7 C4' G B2198 37.854 36.433 61.700 1.00 43.29 C
ATOM 8 O4' G B2198 38.875 36.548 60.702 1.00 43.30 O
ATOM 9 C3' G B2198 37.073 35.204 61.283 1.00 42.99 C
ATOM 10 O3' G B2198 35.740 35.205 61.774 1.00 43.04 O
ATOM 11 C2' G B2198 37.167 35.222 59.756 1.00 43.02 C
ATOM 12 O2' G B2198 36.213 36.088 59.192 1.00 43.32 O
ATOM 13 C1' G B2198 38.508 35.857 59.534 1.00 43.14 C
ATOM 14 N9 G B2198 39.558 34.887 59.194 1.00 42.85 N
ATOM 15 C8 G B2198 40.716 34.650 59.881 1.00 42.73 C
ATOM 16 N7 G B2198 41.470 33.774 59.313 1.00 42.49 N
ATOM 17 C5 G B2198 40.786 33.416 58.170 1.00 42.44 C
ATOM 18 C6 G B2198 41.116 32.501 57.152 1.00 42.23 C
ATOM 19 O6 G B2198 42.102 31.835 57.007 1.00 42.05 O
ATOM 20 N1 G B2198 40.159 32.430 56.186 1.00 42.29 N
ATOM 21 C2 G B2198 39.014 33.175 56.187 1.00 42.52 C
ATOM 22 N2 G B2198 38.230 32.986 55.136 1.00 42.56 N
ATOM 23 N3 G B2198 38.669 34.043 57.114 1.00 42.72 N
ATOM 24 C4 G B2198 39.605 34.114 58.072 1.00 42.67 C
ATOM 25 P C B2199 35.175 33.903 62.499 1.00 37.71 P
ATOM 26 OP1 C B2199 33.829 34.197 63.047 1.00 37.86 O
ATOM 27 OP2 C B2199 36.220 33.468 63.407 1.00 37.54 O
ATOM 28 O5' C B2199 35.057 32.870 61.316 1.00 37.46 O
TER

Atoms:
OP1: (34.822,51.498,63.740)
OP2: (32.355,51.240,64.401)
C3': (34.001,46.152,62.836)
C1': (36.203,45.671,62.153)
C5': (34.718,48.309,64.032)
O4': (36.197,46.959,62.713)
C8: (37.167,45.087,64.404)
O2': (34.471,45.799,60.515)
C6: (38.171,41.757,64.091)
C5: (37.721,43.088,64.091)
C4: (37.178,43.509,62.920)
P: (33.744,50.698,64.381)
C4': (34.841,47.422,62.841)
C2': (34.752,45.314,61.824)
C2: (37.460,41.587,61.921)
N1: (38.009,41.033,62.977)
N3: (37.013,42.825,61.798)
N6: (38.742,41.145,65.131)
N7: (37.703,44.102,65.037)
N9: (36.804,44.767,63.133)
O5': (33.701,49.240,63.797)
O3': (32.650,46.385,62.459)
OP1: (39.616,38.470,65.708)
OP2: (40.905,36.514,64.755)
C3': (37.073,35.204,61.283)
C1': (38.508,35.857,59.534)
C5': (38.500,36.397,63.065)
O6: (42.102,31.835,57.007)
O4': (38.875,36.548,60.702)
C8: (40.716,34.650,59.881)
C2: (39.014,33.175,56.187)
C6: (41.116,32.501,57.152)
C5: (40.786,33.416,58.170)
C4: (39.605,34.114,58.072)
P: (40.223,37.788,64.537)
C4': (37.854,36.433,61.700)
C2': (37.167,35.222,59.756)
O2': (36.213,36.088,59.192)
N1: (40.159,32.430,56.186)
N2: (38.230,32.986,55.136)
N3: (38.669,34.043,57.114)
N7: (41.470,33.774,59.313)
N9: (39.558,34.887,59.194)
O5': (39.150,37.633,63.356)
O3': (35.740,35.205,61.774)
Image (generated by PyMOL):
PyMOL image
show in jmol