Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0474:0499
Extra
PDB:
ATOM 1 O3' A A 473 24.498 162.257 48.858 1.00 45.26 O
ATOM 2 P A A 474 23.796 163.209 47.767 1.00 45.64 P
ATOM 3 OP1 A A 474 23.705 162.490 46.464 1.00 45.11 O
ATOM 4 OP2 A A 474 24.452 164.540 47.823 1.00 47.14 O
ATOM 5 O5' A A 474 22.332 163.387 48.366 1.00 44.01 O
ATOM 6 C5' A A 474 21.457 162.260 48.507 1.00 42.81 C
ATOM 7 C4' A A 474 20.343 162.570 49.477 1.00 42.40 C
ATOM 8 O4' A A 474 19.350 161.515 49.386 1.00 43.59 O
ATOM 9 C3' A A 474 20.735 162.634 50.944 1.00 44.08 C
ATOM 10 O3' A A 474 21.172 163.946 51.313 1.00 46.50 O
ATOM 11 C2' A A 474 19.444 162.215 51.640 1.00 44.66 C
ATOM 12 O2' A A 474 18.507 163.267 51.746 1.00 47.01 O
ATOM 13 C1' A A 474 18.912 161.145 50.679 1.00 43.09 C
ATOM 14 N9 A A 474 19.448 159.812 50.967 1.00 41.20 N
ATOM 15 C8 A A 474 20.360 159.092 50.230 1.00 41.39 C
ATOM 16 N7 A A 474 20.732 157.973 50.796 1.00 39.58 N
ATOM 17 C5 A A 474 20.003 157.942 51.975 1.00 41.09 C
ATOM 18 C6 A A 474 19.974 157.031 53.039 1.00 41.92 C
ATOM 19 N6 A A 474 20.748 155.942 53.096 1.00 43.11 N
ATOM 20 N1 A A 474 19.125 157.282 54.061 1.00 41.84 N
ATOM 21 C2 A A 474 18.371 158.388 54.010 1.00 40.70 C
ATOM 22 N3 A A 474 18.323 159.330 53.074 1.00 40.52 N
ATOM 23 C4 A A 474 19.177 159.047 52.074 1.00 40.59 C
ATOM 24 P G A 475 21.868 164.206 52.753 1.00 48.50 P
ATOM 25 OP1 G A 475 21.436 163.171 53.732 1.00 49.55 O
ATOM 26 OP2 G A 475 21.668 165.638 53.084 1.00 47.39 O
ATOM 27 O5' G A 475 23.423 164.004 52.474 1.00 46.62 O
TER
ATOM 1 O3' U B 498 19.884 149.968 65.530 1.00 70.64 O
ATOM 2 P A B 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 3 OP1 A B 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 4 OP2 A B 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 5 O5' A B 499 19.954 149.742 63.030 1.00 65.15 O
ATOM 6 C5' A B 499 20.697 150.973 62.889 1.00 58.16 C
ATOM 7 C4' A B 499 21.689 150.877 61.751 1.00 53.07 C
ATOM 8 O4' A B 499 20.988 150.604 60.509 1.00 51.93 O
ATOM 9 C3' A B 499 22.437 152.172 61.476 1.00 50.86 C
ATOM 10 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 11 C2' A B 499 22.833 152.021 60.018 1.00 50.50 C
ATOM 12 O2' A B 499 23.962 151.199 59.843 1.00 50.54 O
ATOM 13 C1' A B 499 21.593 151.328 59.445 1.00 50.96 C
ATOM 14 N9 A B 499 20.620 152.298 58.936 1.00 50.21 N
ATOM 15 C8 A B 499 19.448 152.706 59.523 1.00 49.41 C
ATOM 16 N7 A B 499 18.814 153.630 58.849 1.00 49.06 N
ATOM 17 C5 A B 499 19.613 153.840 57.738 1.00 49.67 C
ATOM 18 C6 A B 499 19.495 154.708 56.642 1.00 49.66 C
ATOM 19 N6 A B 499 18.492 155.571 56.490 1.00 48.64 N
ATOM 20 N1 A B 499 20.460 154.665 55.699 1.00 50.18 N
ATOM 21 C2 A B 499 21.472 153.809 55.861 1.00 50.51 C
ATOM 22 N3 A B 499 21.699 152.947 56.851 1.00 50.02 N
ATOM 23 C4 A B 499 20.721 153.014 57.769 1.00 49.61 C
ATOM 24 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 25 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 26 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 27 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
TER
ATOM 2 P A A 474 23.796 163.209 47.767 1.00 45.64 P
ATOM 3 OP1 A A 474 23.705 162.490 46.464 1.00 45.11 O
ATOM 4 OP2 A A 474 24.452 164.540 47.823 1.00 47.14 O
ATOM 5 O5' A A 474 22.332 163.387 48.366 1.00 44.01 O
ATOM 6 C5' A A 474 21.457 162.260 48.507 1.00 42.81 C
ATOM 7 C4' A A 474 20.343 162.570 49.477 1.00 42.40 C
ATOM 8 O4' A A 474 19.350 161.515 49.386 1.00 43.59 O
ATOM 9 C3' A A 474 20.735 162.634 50.944 1.00 44.08 C
ATOM 10 O3' A A 474 21.172 163.946 51.313 1.00 46.50 O
ATOM 11 C2' A A 474 19.444 162.215 51.640 1.00 44.66 C
ATOM 12 O2' A A 474 18.507 163.267 51.746 1.00 47.01 O
ATOM 13 C1' A A 474 18.912 161.145 50.679 1.00 43.09 C
ATOM 14 N9 A A 474 19.448 159.812 50.967 1.00 41.20 N
ATOM 15 C8 A A 474 20.360 159.092 50.230 1.00 41.39 C
ATOM 16 N7 A A 474 20.732 157.973 50.796 1.00 39.58 N
ATOM 17 C5 A A 474 20.003 157.942 51.975 1.00 41.09 C
ATOM 18 C6 A A 474 19.974 157.031 53.039 1.00 41.92 C
ATOM 19 N6 A A 474 20.748 155.942 53.096 1.00 43.11 N
ATOM 20 N1 A A 474 19.125 157.282 54.061 1.00 41.84 N
ATOM 21 C2 A A 474 18.371 158.388 54.010 1.00 40.70 C
ATOM 22 N3 A A 474 18.323 159.330 53.074 1.00 40.52 N
ATOM 23 C4 A A 474 19.177 159.047 52.074 1.00 40.59 C
ATOM 24 P G A 475 21.868 164.206 52.753 1.00 48.50 P
ATOM 25 OP1 G A 475 21.436 163.171 53.732 1.00 49.55 O
ATOM 26 OP2 G A 475 21.668 165.638 53.084 1.00 47.39 O
ATOM 27 O5' G A 475 23.423 164.004 52.474 1.00 46.62 O
TER
ATOM 1 O3' U B 498 19.884 149.968 65.530 1.00 70.64 O
ATOM 2 P A B 499 18.984 149.522 64.279 1.00 70.61 P
ATOM 3 OP1 A B 499 17.834 150.452 64.142 1.00 70.56 O
ATOM 4 OP2 A B 499 18.725 148.063 64.473 1.00 72.27 O
ATOM 5 O5' A B 499 19.954 149.742 63.030 1.00 65.15 O
ATOM 6 C5' A B 499 20.697 150.973 62.889 1.00 58.16 C
ATOM 7 C4' A B 499 21.689 150.877 61.751 1.00 53.07 C
ATOM 8 O4' A B 499 20.988 150.604 60.509 1.00 51.93 O
ATOM 9 C3' A B 499 22.437 152.172 61.476 1.00 50.86 C
ATOM 10 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 11 C2' A B 499 22.833 152.021 60.018 1.00 50.50 C
ATOM 12 O2' A B 499 23.962 151.199 59.843 1.00 50.54 O
ATOM 13 C1' A B 499 21.593 151.328 59.445 1.00 50.96 C
ATOM 14 N9 A B 499 20.620 152.298 58.936 1.00 50.21 N
ATOM 15 C8 A B 499 19.448 152.706 59.523 1.00 49.41 C
ATOM 16 N7 A B 499 18.814 153.630 58.849 1.00 49.06 N
ATOM 17 C5 A B 499 19.613 153.840 57.738 1.00 49.67 C
ATOM 18 C6 A B 499 19.495 154.708 56.642 1.00 49.66 C
ATOM 19 N6 A B 499 18.492 155.571 56.490 1.00 48.64 N
ATOM 20 N1 A B 499 20.460 154.665 55.699 1.00 50.18 N
ATOM 21 C2 A B 499 21.472 153.809 55.861 1.00 50.51 C
ATOM 22 N3 A B 499 21.699 152.947 56.851 1.00 50.02 N
ATOM 23 C4 A B 499 20.721 153.014 57.769 1.00 49.61 C
ATOM 24 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 25 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 26 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 27 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
TER
Atoms:
OP1: (23.705,162.490,46.464)
OP2: (24.452,164.540,47.823)
C3': (20.735,162.634,50.944)
C1': (18.912,161.145,50.679)
C5': (21.457,162.260,48.507)
O4': (19.350,161.515,49.386)
C8: (20.360,159.092,50.230)
O2': (18.507,163.267,51.746)
C6: (19.974,157.031,53.039)
C5: (20.003,157.942,51.975)
C4: (19.177,159.047,52.074)
P: (23.796,163.209,47.767)
C4': (20.343,162.570,49.477)
C2': (19.444,162.215,51.640)
C2: (18.371,158.388,54.010)
N1: (19.125,157.282,54.061)
N3: (18.323,159.330,53.074)
N6: (20.748,155.942,53.096)
N7: (20.732,157.973,50.796)
N9: (19.448,159.812,50.967)
O5': (22.332,163.387,48.366)
O3': (21.172,163.946,51.313)
OP2: (24.452,164.540,47.823)
C3': (20.735,162.634,50.944)
C1': (18.912,161.145,50.679)
C5': (21.457,162.260,48.507)
O4': (19.350,161.515,49.386)
C8: (20.360,159.092,50.230)
O2': (18.507,163.267,51.746)
C6: (19.974,157.031,53.039)
C5: (20.003,157.942,51.975)
C4: (19.177,159.047,52.074)
P: (23.796,163.209,47.767)
C4': (20.343,162.570,49.477)
C2': (19.444,162.215,51.640)
C2: (18.371,158.388,54.010)
N1: (19.125,157.282,54.061)
N3: (18.323,159.330,53.074)
N6: (20.748,155.942,53.096)
N7: (20.732,157.973,50.796)
N9: (19.448,159.812,50.967)
O5': (22.332,163.387,48.366)
O3': (21.172,163.946,51.313)
OP1: (17.834,150.452,64.142)
OP2: (18.725,148.063,64.473)
C3': (22.437,152.172,61.476)
C1': (21.593,151.328,59.445)
C5': (20.697,150.973,62.889)
O4': (20.988,150.604,60.509)
C8: (19.448,152.706,59.523)
O2': (23.962,151.199,59.843)
C6: (19.495,154.708,56.642)
C5: (19.613,153.840,57.738)
C4: (20.721,153.014,57.769)
P: (18.984,149.522,64.279)
C4': (21.689,150.877,61.751)
C2': (22.833,152.021,60.018)
C2: (21.472,153.809,55.861)
N1: (20.460,154.665,55.699)
N3: (21.699,152.947,56.851)
N6: (18.492,155.571,56.490)
N7: (18.814,153.630,58.849)
N9: (20.620,152.298,58.936)
O5': (19.954,149.742,63.030)
O3': (23.562,152.321,62.329)
OP2: (18.725,148.063,64.473)
C3': (22.437,152.172,61.476)
C1': (21.593,151.328,59.445)
C5': (20.697,150.973,62.889)
O4': (20.988,150.604,60.509)
C8: (19.448,152.706,59.523)
O2': (23.962,151.199,59.843)
C6: (19.495,154.708,56.642)
C5: (19.613,153.840,57.738)
C4: (20.721,153.014,57.769)
P: (18.984,149.522,64.279)
C4': (21.689,150.877,61.751)
C2': (22.833,152.021,60.018)
C2: (21.472,153.809,55.861)
N1: (20.460,154.665,55.699)
N3: (21.699,152.947,56.851)
N6: (18.492,155.571,56.490)
N7: (18.814,153.630,58.849)
N9: (20.620,152.298,58.936)
O5': (19.954,149.742,63.030)
O3': (23.562,152.321,62.329)
Image (generated by PyMOL):